RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 HSP90AA2PQ14568 343 aaPredicted RBP17.17■□□□□ 0.34
SSPO-205ENST00000475488 CCDC144AA2RUR9 1427 aa17.17■□□□□ 0.34
SSPO-205ENST00000475488 RSPH4AQ5TD94 716 aa17.17■□□□□ 0.34
SSPO-205ENST00000475488 NINLQ9Y2I6 1382 aa17.17■□□□□ 0.34
SSPO-205ENST00000475488 BAZ1AQ9NRL2 1556 aaPredicted RBP17.16■□□□□ 0.34
SSPO-205ENST00000475488 TBC1D2BQ9UPU7 963 aa17.16■□□□□ 0.34
SSPO-205ENST00000475488 RBM5P52756 815 aaKnown RBP eCLIP17.16■□□□□ 0.34
SSPO-205ENST00000475488 CENPQQ7L2Z9 268 aaPredicted RBP17.16■□□□□ 0.34
SSPO-205ENST00000475488 CCDC191Q8NCU4 936 aa17.16■□□□□ 0.34
SSPO-205ENST00000475488 NAT10Q9H0A0 1025 aaKnown RBP17.16■□□□□ 0.34
SSPO-205ENST00000475488 MPHOSPH10O00566 681 aaKnown RBP17.16■□□□□ 0.34
SSPO-205ENST00000475488 PANK3Q9H999 370 aa17.16■□□□□ 0.34
SSPO-205ENST00000475488 IBSPP21815 317 aaPredicted RBP17.15■□□□□ 0.34
SSPO-205ENST00000475488 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
SSPO-205ENST00000475488 SEPT7Q16181 437 aaKnown RBP17.15■□□□□ 0.34
SSPO-205ENST00000475488 MNS1Q8NEH6 495 aa17.15■□□□□ 0.34
SSPO-205ENST00000475488 ANKRD62A6NC57 917 aa17.15■□□□□ 0.34
SSPO-205ENST00000475488 MATR3P43243 847 aaKnown RBP eCLIP17.15■□□□□ 0.34
SSPO-205ENST00000475488 NOM1Q5C9Z4 860 aaKnown RBP17.14■□□□□ 0.33
SSPO-205ENST00000475488 DIAPH1O60610 1272 aaKnown RBP17.14■□□□□ 0.33
SSPO-205ENST00000475488 TXLNAP40222 546 aa17.14■□□□□ 0.33
SSPO-205ENST00000475488 HSP90AB4PQ58FF6 505 aa17.14■□□□□ 0.33
SSPO-205ENST00000475488 E9PSI1 815 aa17.14■□□□□ 0.33
SSPO-205ENST00000475488 NLRP2Q9NX02 1062 aa17.14■□□□□ 0.33
SSPO-205ENST00000475488 BCL11BQ9C0K0 894 aaPredicted RBP17.13■□□□□ 0.33
SSPO-205ENST00000475488 KAT6BQ8WYB5 2073 aa17.13■□□□□ 0.33
SSPO-205ENST00000475488 ARGLU1Q9NWB6 273 aaPredicted RBP17.13■□□□□ 0.33
SSPO-205ENST00000475488 NEBLO76041 1014 aa17.13■□□□□ 0.33
SSPO-205ENST00000475488 HSP90B2PQ58FF3 399 aa17.13■□□□□ 0.33
SSPO-205ENST00000475488 MYO15BQ96JP2 1530 aa17.13■□□□□ 0.33
SSPO-205ENST00000475488 CHMP5Q9NZZ3 219 aa17.13■□□□□ 0.33
SSPO-205ENST00000475488 RIPK4P57078 832 aa17.12■□□□□ 0.33
SSPO-205ENST00000475488 ANKRD18AQ8IVF6 992 aa17.12■□□□□ 0.33
SSPO-205ENST00000475488 PDCL3Q9H2J4 239 aa17.12■□□□□ 0.33
SSPO-205ENST00000475488 INTS3Q68E01 1043 aaKnown RBP17.12■□□□□ 0.33
SSPO-205ENST00000475488 NUTM2GQ5VZR2 741 aa17.11■□□□□ 0.33
SSPO-205ENST00000475488 IFT57Q9NWB7 429 aa17.11■□□□□ 0.33
SSPO-205ENST00000475488 MYBBP1AQ9BQG0 1328 aaKnown RBP17.11■□□□□ 0.33
SSPO-205ENST00000475488 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
SSPO-205ENST00000475488 DDX19BQ9UMR2 479 aa17.11■□□□□ 0.33
SSPO-205ENST00000475488 FAM161AQ3B820 660 aa17.1■□□□□ 0.33
SSPO-205ENST00000475488 SPDYE4A6NLX3 237 aa17.1■□□□□ 0.33
SSPO-205ENST00000475488 SMARCE1Q969G3 411 aa17.1■□□□□ 0.33
SSPO-205ENST00000475488 STRN4Q9NRL3 753 aa17.09■□□□□ 0.33
SSPO-205ENST00000475488 RAB3GAP2Q9H2M9 1393 aa17.09■□□□□ 0.33
SSPO-205ENST00000475488 ERLIN2O94905 339 aa17.09■□□□□ 0.33
SSPO-205ENST00000475488 NUTM2BA6NNL0 878 aaPredicted RBP17.09■□□□□ 0.33
SSPO-205ENST00000475488 NUTM2EB1AL46 878 aaPredicted RBP17.09■□□□□ 0.33
SSPO-205ENST00000475488 NUTM2AQ8IVF1 878 aaPredicted RBP17.09■□□□□ 0.33
SSPO-205ENST00000475488 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
SSPO-205ENST00000475488 CNNM1Q9NRU3 951 aa17.09■□□□□ 0.33
SSPO-205ENST00000475488 TTC39AQ5SRH9 613 aa17.09■□□□□ 0.33
SSPO-205ENST00000475488 GNL3LQ9NVN8 582 aaKnown RBP17.09■□□□□ 0.33
SSPO-205ENST00000475488 PSMA5P28066 241 aa17.08■□□□□ 0.33
SSPO-205ENST00000475488 CNTROBQ8N137 903 aa17.08■□□□□ 0.33
SSPO-205ENST00000475488 DESP17661 470 aa17.08■□□□□ 0.32
SSPO-205ENST00000475488 ZHX3Q9H4I2 956 aa17.08■□□□□ 0.32
SSPO-205ENST00000475488 TRIM21P19474 475 aaKnown RBP17.08■□□□□ 0.32
SSPO-205ENST00000475488 BRPF1P55201 1214 aaPredicted RBP17.08■□□□□ 0.32
SSPO-205ENST00000475488 FILIP1LQ4L180 1135 aa17.08■□□□□ 0.32
SSPO-205ENST00000475488 SMG6Q86US8 1419 aaKnown RBP17.07■□□□□ 0.32
SSPO-205ENST00000475488 COG6Q9Y2V7 657 aa17.07■□□□□ 0.32
SSPO-205ENST00000475488 STK11IPQ8N1F8 1099 aa17.06■□□□□ 0.32
SSPO-205ENST00000475488 ERCC4Q92889 916 aaPredicted RBP17.06■□□□□ 0.32
SSPO-205ENST00000475488 HMOX1P09601 288 aa17.06■□□□□ 0.32
SSPO-205ENST00000475488 UBTFL1P0CB47 393 aaPredicted RBP17.06■□□□□ 0.32
SSPO-205ENST00000475488 DNAJC2Q99543 621 aaKnown RBP17.06■□□□□ 0.32
SSPO-205ENST00000475488 H0YHG0 523 aa17.06■□□□□ 0.32
SSPO-205ENST00000475488 ENOX2Q16206 610 aaKnown RBP17.05■□□□□ 0.32
SSPO-205ENST00000475488 SDF4Q9BRK5 362 aa17.05■□□□□ 0.32
SSPO-205ENST00000475488 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.05■□□□□ 0.32
SSPO-205ENST00000475488 ATP2B1P20020 1258 aa17.05■□□□□ 0.32
SSPO-205ENST00000475488 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
SSPO-205ENST00000475488 PLCD4Q9BRC7 762 aa17.04■□□□□ 0.32
SSPO-205ENST00000475488 TMEM87AQ8NBN3 555 aa17.04■□□□□ 0.32
SSPO-205ENST00000475488 MIA2Q96PC5 1412 aa17.04■□□□□ 0.32
SSPO-205ENST00000475488 FSD1Q9BTV5 496 aa17.03■□□□□ 0.32
SSPO-205ENST00000475488 TDRD9Q8NDG6 1382 aaKnown RBP17.03■□□□□ 0.32
SSPO-205ENST00000475488 ZSCAN29Q8IWY8 852 aaPredicted RBP17.03■□□□□ 0.32
SSPO-205ENST00000475488 SMC2O95347 1197 aa17.03■□□□□ 0.32
SSPO-205ENST00000475488 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
SSPO-205ENST00000475488 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.32
SSPO-205ENST00000475488 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.32
SSPO-205ENST00000475488 GBP2P32456 591 aaPredicted RBP17.02■□□□□ 0.32
SSPO-205ENST00000475488 ABCC8Q09428 1581 aa17.02■□□□□ 0.31
SSPO-205ENST00000475488 PAXIP1Q6ZW49 1069 aaPredicted RBP17.02■□□□□ 0.31
SSPO-205ENST00000475488 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.31
SSPO-205ENST00000475488 ABTB2Q8N961 1025 aa17.01■□□□□ 0.31
SSPO-205ENST00000475488 SMARCA2P51531 1590 aa17.01■□□□□ 0.31
SSPO-205ENST00000475488 PIP4K2BP78356 416 aa17.01■□□□□ 0.31
SSPO-205ENST00000475488 CCDC158Q5M9N0 1113 aa17■□□□□ 0.31
SSPO-205ENST00000475488 TANGO6Q9C0B7 1094 aa17■□□□□ 0.31
SSPO-205ENST00000475488 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
SSPO-205ENST00000475488 DDX24Q9GZR7 859 aaKnown RBP eCLIP17■□□□□ 0.31
SSPO-205ENST00000475488 CECR2Q9BXF3 1484 aa17■□□□□ 0.31
SSPO-205ENST00000475488 DNAI2Q9GZS0 605 aa17■□□□□ 0.31
SSPO-205ENST00000475488 FAM69CQ0P6D2 419 aa17■□□□□ 0.31
SSPO-205ENST00000475488 ZNHIT6Q9NWK9 470 aaKnown RBP17■□□□□ 0.31
SSPO-205ENST00000475488 SEPT11Q9NVA2 429 aaKnown RBP17■□□□□ 0.31
SSPO-205ENST00000475488 GOLGA6L10A6NI86 522 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms