RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 SRPK2P78362 688 aaKnown RBP20.51■□□□□ 0.87
RPUSD3-215ENST00000475470 MINK1Q8N4C8 1332 aaPredicted RBP20.5■□□□□ 0.87
RPUSD3-215ENST00000475470 HDGFP51858 240 aaKnown RBP20.5■□□□□ 0.87
RPUSD3-215ENST00000475470 ERICH6BQ5W0A0 696 aa20.49■□□□□ 0.87
RPUSD3-215ENST00000475470 PDE3BQ13370 1112 aa20.48■□□□□ 0.87
RPUSD3-215ENST00000475470 ANKRD36BQ8N2N9 1353 aa20.48■□□□□ 0.87
RPUSD3-215ENST00000475470 MORC1Q86VD1 984 aa20.47■□□□□ 0.87
RPUSD3-215ENST00000475470 CGNL1Q0VF96 1302 aa20.47■□□□□ 0.87
RPUSD3-215ENST00000475470 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
RPUSD3-215ENST00000475470 USP32Q8NFA0 1604 aa20.45■□□□□ 0.86
RPUSD3-215ENST00000475470 ATAD2Q6PL18 1390 aa20.45■□□□□ 0.86
RPUSD3-215ENST00000475470 SETD1AO15047 1707 aaKnown RBP20.45■□□□□ 0.86
RPUSD3-215ENST00000475470 DLC1Q96QB1 1528 aa20.44■□□□□ 0.86
RPUSD3-215ENST00000475470 NRXN3Q9Y4C0 1643 aa20.42■□□□□ 0.86
RPUSD3-215ENST00000475470 ABCC11Q96J66 1382 aa20.42■□□□□ 0.86
RPUSD3-215ENST00000475470 UBR1Q8IWV7 1749 aa20.42■□□□□ 0.86
RPUSD3-215ENST00000475470 CDK19Q9BWU1 502 aa20.42■□□□□ 0.86
RPUSD3-215ENST00000475470 TMEM2Q9UHN6 1383 aa20.41■□□□□ 0.86
RPUSD3-215ENST00000475470 TNNT2P45379 298 aaPredicted RBP20.41■□□□□ 0.86
RPUSD3-215ENST00000475470 CEBPAP49715 358 aaPredicted RBP20.41■□□□□ 0.86
RPUSD3-215ENST00000475470 WAPLQ7Z5K2 1190 aa20.41■□□□□ 0.86
RPUSD3-215ENST00000475470 RNF123Q5XPI4 1314 aa20.4■□□□□ 0.86
RPUSD3-215ENST00000475470 NSD2O96028 1365 aa20.4■□□□□ 0.86
RPUSD3-215ENST00000475470 PPP4R2Q9NY27 417 aa20.39■□□□□ 0.86
RPUSD3-215ENST00000475470 TERF2IPQ9NYB0 399 aa20.39■□□□□ 0.86
RPUSD3-215ENST00000475470 A0A1W2PP64 1363 aa20.39■□□□□ 0.86
RPUSD3-215ENST00000475470 POLR3AO14802 1390 aaPredicted RBP20.39■□□□□ 0.86
RPUSD3-215ENST00000475470 METP08581 1390 aa20.39■□□□□ 0.86
RPUSD3-215ENST00000475470 CDCA7LQ96GN5 454 aa20.38■□□□□ 0.85
RPUSD3-215ENST00000475470 NLRP1Q9C000 1473 aa20.38■□□□□ 0.85
RPUSD3-215ENST00000475470 PLEKHH1Q9ULM0 1364 aa20.37■□□□□ 0.85
RPUSD3-215ENST00000475470 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
RPUSD3-215ENST00000475470 HDGFL2Q7Z4V5 671 aaPredicted RBP20.35■□□□□ 0.85
RPUSD3-215ENST00000475470 CCDC146Q8IYE0 955 aa20.35■□□□□ 0.85
RPUSD3-215ENST00000475470 RCAN3Q9UKA8 241 aa20.35■□□□□ 0.85
RPUSD3-215ENST00000475470 C3P01024 1663 aa20.35■□□□□ 0.85
RPUSD3-215ENST00000475470 FER1L4A9Z1Z3 1794 aa20.35■□□□□ 0.85
RPUSD3-215ENST00000475470 TXNDC2Q86VQ3 553 aa20.34■□□□□ 0.85
RPUSD3-215ENST00000475470 CABP1Q9NZU7 370 aa20.33■□□□□ 0.85
RPUSD3-215ENST00000475470 MTHFSP49914 203 aa20.33■□□□□ 0.84
RPUSD3-215ENST00000475470 CFAP53Q96M91 514 aa20.32■□□□□ 0.84
RPUSD3-215ENST00000475470 CD163L1Q9NR16 1453 aa20.32■□□□□ 0.84
RPUSD3-215ENST00000475470 SIRT1Q96EB6 747 aa20.32■□□□□ 0.84
RPUSD3-215ENST00000475470 LTKP29376 864 aa20.31■□□□□ 0.84
RPUSD3-215ENST00000475470 EID1Q9Y6B2 187 aa20.31■□□□□ 0.84
RPUSD3-215ENST00000475470 KNDC1Q76NI1 1749 aa20.31■□□□□ 0.84
RPUSD3-215ENST00000475470 FAM135BQ49AJ0 1406 aa20.3■□□□□ 0.84
RPUSD3-215ENST00000475470 GGNBP2Q9H3C7 697 aa20.3■□□□□ 0.84
RPUSD3-215ENST00000475470 PLEKHG1Q9ULL1 1385 aa20.3■□□□□ 0.84
RPUSD3-215ENST00000475470 WASLO00401 505 aaPredicted RBP20.29■□□□□ 0.84
RPUSD3-215ENST00000475470 APAF1O14727 1248 aa20.29■□□□□ 0.84
RPUSD3-215ENST00000475470 TECPR2O15040 1411 aa20.29■□□□□ 0.84
RPUSD3-215ENST00000475470 ZNF521Q96K83 1311 aa20.28■□□□□ 0.84
RPUSD3-215ENST00000475470 ADAMTS13Q76LX8 1427 aa20.28■□□□□ 0.84
RPUSD3-215ENST00000475470 FYB1O15117 783 aa20.28■□□□□ 0.84
RPUSD3-215ENST00000475470 RRP1P56182 461 aaKnown RBP20.28■□□□□ 0.84
RPUSD3-215ENST00000475470 GOLGA2Q08379 1002 aa20.28■□□□□ 0.84
RPUSD3-215ENST00000475470 SHPRHQ149N8 1683 aa20.27■□□□□ 0.84
RPUSD3-215ENST00000475470 CPS1P31327 1500 aa20.27■□□□□ 0.84
RPUSD3-215ENST00000475470 B4GALNT3Q6L9W6 998 aa20.26■□□□□ 0.83
RPUSD3-215ENST00000475470 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
RPUSD3-215ENST00000475470 TSHZ2Q9NRE2 1034 aa20.26■□□□□ 0.83
RPUSD3-215ENST00000475470 ATP7BP35670 1465 aa20.26■□□□□ 0.83
RPUSD3-215ENST00000475470 MED14O60244 1454 aa20.25■□□□□ 0.83
RPUSD3-215ENST00000475470 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
RPUSD3-215ENST00000475470 THEMISQ8N1K5 641 aaPredicted RBP20.24■□□□□ 0.83
RPUSD3-215ENST00000475470 SLIT1O75093 1534 aa20.23■□□□□ 0.83
RPUSD3-215ENST00000475470 DUSP27Q5VZP5 1158 aa20.23■□□□□ 0.83
RPUSD3-215ENST00000475470 SLC26A8Q96RN1 970 aa20.23■□□□□ 0.83
RPUSD3-215ENST00000475470 PPIP5K1Q6PFW1 1433 aa20.22■□□□□ 0.83
RPUSD3-215ENST00000475470 ROBO2Q9HCK4 1378 aa20.22■□□□□ 0.83
RPUSD3-215ENST00000475470 RUNDC1Q96C34 613 aa20.22■□□□□ 0.83
RPUSD3-215ENST00000475470 NUDT16Q96DE0 195 aaKnown RBP20.22■□□□□ 0.83
RPUSD3-215ENST00000475470 ARHGAP23Q9P227 1491 aa20.22■□□□□ 0.83
RPUSD3-215ENST00000475470 SLFN5Q08AF3 891 aa20.21■□□□□ 0.83
RPUSD3-215ENST00000475470 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.21■□□□□ 0.83
RPUSD3-215ENST00000475470 KIF20BQ96Q89 1820 aa20.21■□□□□ 0.83
RPUSD3-215ENST00000475470 CCDC61Q9Y6R9 512 aa20.2■□□□□ 0.82
RPUSD3-215ENST00000475470 U2AF1L5P0DN76 240 aaPredicted RBP20.18■□□□□ 0.82
RPUSD3-215ENST00000475470 U2AF1Q01081 240 aaKnown RBP eCLIP20.18■□□□□ 0.82
RPUSD3-215ENST00000475470 CPSF1Q10570 1443 aaKnown RBP20.18■□□□□ 0.82
RPUSD3-215ENST00000475470 CCDC136Q96JN2 1154 aa20.17■□□□□ 0.82
RPUSD3-215ENST00000475470 TBX22Q9Y458 520 aa20.17■□□□□ 0.82
RPUSD3-215ENST00000475470 E9PSI1 815 aa20.16■□□□□ 0.82
RPUSD3-215ENST00000475470 TRMT2AQ8IZ69 625 aaKnown RBP20.16■□□□□ 0.82
RPUSD3-215ENST00000475470 TCP11L2Q8N4U5 519 aa20.16■□□□□ 0.82
RPUSD3-215ENST00000475470 EDC4Q6P2E9 1401 aaKnown RBP20.16■□□□□ 0.82
RPUSD3-215ENST00000475470 PTPRUQ92729 1446 aa20.15■□□□□ 0.82
RPUSD3-215ENST00000475470 NCKAP5LQ9HCH0 1330 aa20.15■□□□□ 0.82
RPUSD3-215ENST00000475470 NEUROD2Q15784 382 aa20.15■□□□□ 0.82
RPUSD3-215ENST00000475470 WWC1Q8IX03 1113 aa20.15■□□□□ 0.82
RPUSD3-215ENST00000475470 AMOTL2Q9Y2J4 779 aa20.15■□□□□ 0.82
RPUSD3-215ENST00000475470 SPINK5Q9NQ38 1064 aaPredicted RBP20.14■□□□□ 0.82
RPUSD3-215ENST00000475470 CDC42BPGQ6DT37 1551 aa20.14■□□□□ 0.81
RPUSD3-215ENST00000475470 RIMS1Q86UR5 1692 aaKnown RBP20.14■□□□□ 0.81
RPUSD3-215ENST00000475470 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.14■□□□□ 0.81
RPUSD3-215ENST00000475470 ADGRB2O60241 1585 aa20.13■□□□□ 0.81
RPUSD3-215ENST00000475470 U2SURPO15042 1029 aaKnown RBP20.13■□□□□ 0.81
RPUSD3-215ENST00000475470 PLIN1O60240 522 aa20.13■□□□□ 0.81
RPUSD3-215ENST00000475470 EXOC6Q8TAG9 804 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms