RNA–Protein interactions for RNA: ENST00000475463.6

PCNX2-209, Transcript of pecanex 2, humanhuman

TSL 1 (best)

Gene PCNX2, Length 2,183 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-209ENST00000475463 CDCA7LQ96GN5 454 aa17.59■□□□□ 0.41
PCNX2-209ENST00000475463 CABP2Q9NPB3 220 aa17.59■□□□□ 0.41
PCNX2-209ENST00000475463 ANKRD36BQ8N2N9 1353 aa17.57■□□□□ 0.4
PCNX2-209ENST00000475463 PRAM1Q96QH2 718 aa17.56■□□□□ 0.4
PCNX2-209ENST00000475463 ESF1Q9H501 851 aaKnown RBP17.55■□□□□ 0.4
PCNX2-209ENST00000475463 POLR3AO14802 1390 aaPredicted RBP17.55■□□□□ 0.4
PCNX2-209ENST00000475463 PLEKHH1Q9ULM0 1364 aa17.54■□□□□ 0.4
PCNX2-209ENST00000475463 MORC1Q86VD1 984 aa17.54■□□□□ 0.4
PCNX2-209ENST00000475463 NRXN3Q9Y4C0 1643 aa17.54■□□□□ 0.4
PCNX2-209ENST00000475463 RCAN3Q9UKA8 241 aa17.53■□□□□ 0.4
PCNX2-209ENST00000475463 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
PCNX2-209ENST00000475463 DLC1Q96QB1 1528 aa17.53■□□□□ 0.4
PCNX2-209ENST00000475463 B4GALNT3Q6L9W6 998 aa17.53■□□□□ 0.4
PCNX2-209ENST00000475463 POGKQ9P215 609 aa17.53■□□□□ 0.4
PCNX2-209ENST00000475463 CGNL1Q0VF96 1302 aa17.53■□□□□ 0.4
PCNX2-209ENST00000475463 ZNF521Q96K83 1311 aa17.53■□□□□ 0.4
PCNX2-209ENST00000475463 NINLQ9Y2I6 1382 aa17.52■□□□□ 0.4
PCNX2-209ENST00000475463 SRPK2P78362 688 aaKnown RBP17.52■□□□□ 0.39
PCNX2-209ENST00000475463 SHPRHQ149N8 1683 aa17.51■□□□□ 0.39
PCNX2-209ENST00000475463 RRP1P56182 461 aaKnown RBP17.5■□□□□ 0.39
PCNX2-209ENST00000475463 A0A1W2PP64 1363 aa17.5■□□□□ 0.39
PCNX2-209ENST00000475463 ATAD2Q6PL18 1390 aa17.5■□□□□ 0.39
PCNX2-209ENST00000475463 TNRQ92752 1358 aa17.5■□□□□ 0.39
PCNX2-209ENST00000475463 NSD2O96028 1365 aa17.5■□□□□ 0.39
PCNX2-209ENST00000475463 CCDC146Q8IYE0 955 aa17.49■□□□□ 0.39
PCNX2-209ENST00000475463 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.49■□□□□ 0.39
PCNX2-209ENST00000475463 CD163L1Q9NR16 1453 aa17.49■□□□□ 0.39
PCNX2-209ENST00000475463 ABCC11Q96J66 1382 aa17.49■□□□□ 0.39
PCNX2-209ENST00000475463 TNNT2P45379 298 aaPredicted RBP17.48■□□□□ 0.39
PCNX2-209ENST00000475463 UBR1Q8IWV7 1749 aa17.48■□□□□ 0.39
PCNX2-209ENST00000475463 CDK19Q9BWU1 502 aa17.47■□□□□ 0.39
PCNX2-209ENST00000475463 WAPLQ7Z5K2 1190 aa17.46■□□□□ 0.39
PCNX2-209ENST00000475463 METP08581 1390 aa17.46■□□□□ 0.39
PCNX2-209ENST00000475463 APAF1O14727 1248 aa17.46■□□□□ 0.39
PCNX2-209ENST00000475463 DUSP27Q5VZP5 1158 aa17.45■□□□□ 0.38
PCNX2-209ENST00000475463 MTHFSP49914 203 aa17.45■□□□□ 0.38
PCNX2-209ENST00000475463 GOLGA2Q08379 1002 aa17.44■□□□□ 0.38
PCNX2-209ENST00000475463 TMEM2Q9UHN6 1383 aa17.43■□□□□ 0.38
PCNX2-209ENST00000475463 ANKRD26Q9UPS8 1709 aa17.43■□□□□ 0.38
PCNX2-209ENST00000475463 HDGFP51858 240 aaKnown RBP17.43■□□□□ 0.38
PCNX2-209ENST00000475463 TERF2IPQ9NYB0 399 aa17.43■□□□□ 0.38
PCNX2-209ENST00000475463 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
PCNX2-209ENST00000475463 NLRP1Q9C000 1473 aa17.43■□□□□ 0.38
PCNX2-209ENST00000475463 TRMT2AQ8IZ69 625 aaKnown RBP17.42■□□□□ 0.38
PCNX2-209ENST00000475463 SLFN5Q08AF3 891 aa17.42■□□□□ 0.38
PCNX2-209ENST00000475463 MED14O60244 1454 aa17.41■□□□□ 0.38
PCNX2-209ENST00000475463 CABP1Q9NZU7 370 aa17.41■□□□□ 0.38
PCNX2-209ENST00000475463 FYB1O15117 783 aa17.4■□□□□ 0.38
PCNX2-209ENST00000475463 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
PCNX2-209ENST00000475463 TECPR2O15040 1411 aa17.4■□□□□ 0.38
PCNX2-209ENST00000475463 GGNBP2Q9H3C7 697 aa17.4■□□□□ 0.38
PCNX2-209ENST00000475463 EXOC6Q8TAG9 804 aa17.39■□□□□ 0.37
PCNX2-209ENST00000475463 SIRT1Q96EB6 747 aa17.39■□□□□ 0.37
PCNX2-209ENST00000475463 CCDC136Q96JN2 1154 aa17.39■□□□□ 0.37
PCNX2-209ENST00000475463 SPINK5Q9NQ38 1064 aaPredicted RBP17.39■□□□□ 0.37
PCNX2-209ENST00000475463 C3P01024 1663 aa17.39■□□□□ 0.37
PCNX2-209ENST00000475463 CEBPAP49715 358 aaPredicted RBP17.39■□□□□ 0.37
PCNX2-209ENST00000475463 CFAP53Q96M91 514 aa17.39■□□□□ 0.37
PCNX2-209ENST00000475463 FAM135BQ49AJ0 1406 aa17.38■□□□□ 0.37
PCNX2-209ENST00000475463 HDGFL2Q7Z4V5 671 aaPredicted RBP17.38■□□□□ 0.37
PCNX2-209ENST00000475463 RBM19Q9Y4C8 960 aaKnown RBP17.38■□□□□ 0.37
PCNX2-209ENST00000475463 KIF20BQ96Q89 1820 aa17.38■□□□□ 0.37
PCNX2-209ENST00000475463 ADAMTS13Q76LX8 1427 aa17.38■□□□□ 0.37
PCNX2-209ENST00000475463 TXNDC2Q86VQ3 553 aa17.38■□□□□ 0.37
PCNX2-209ENST00000475463 CPS1P31327 1500 aa17.37■□□□□ 0.37
PCNX2-209ENST00000475463 ATP7BP35670 1465 aa17.37■□□□□ 0.37
PCNX2-209ENST00000475463 IQSEC2Q5JU85 1478 aa17.37■□□□□ 0.37
PCNX2-209ENST00000475463 WASLO00401 505 aaPredicted RBP17.36■□□□□ 0.37
PCNX2-209ENST00000475463 PLIN1O60240 522 aa17.36■□□□□ 0.37
PCNX2-209ENST00000475463 RUNDC1Q96C34 613 aa17.36■□□□□ 0.37
PCNX2-209ENST00000475463 DMRT2Q9Y5R5 561 aa17.36■□□□□ 0.37
PCNX2-209ENST00000475463 LTKP29376 864 aa17.36■□□□□ 0.37
PCNX2-209ENST00000475463 FER1L4A9Z1Z3 1794 aa17.35■□□□□ 0.37
PCNX2-209ENST00000475463 COL3A1P02461 1466 aaPredicted RBP17.35■□□□□ 0.37
PCNX2-209ENST00000475463 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
PCNX2-209ENST00000475463 PLEKHG1Q9ULL1 1385 aa17.34■□□□□ 0.37
PCNX2-209ENST00000475463 E9PSI1 815 aa17.33■□□□□ 0.37
PCNX2-209ENST00000475463 PHF23Q9BUL5 403 aaPredicted RBP17.33■□□□□ 0.36
PCNX2-209ENST00000475463 NKTRP30414 1462 aaKnown RBP17.32■□□□□ 0.36
PCNX2-209ENST00000475463 CPSF1Q10570 1443 aaKnown RBP17.32■□□□□ 0.36
PCNX2-209ENST00000475463 TCP11L2Q8N4U5 519 aa17.32■□□□□ 0.36
PCNX2-209ENST00000475463 ROBO2Q9HCK4 1378 aa17.31■□□□□ 0.36
PCNX2-209ENST00000475463 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
PCNX2-209ENST00000475463 SLIT1O75093 1534 aa17.31■□□□□ 0.36
PCNX2-209ENST00000475463 TRHP20396 242 aaPredicted RBP17.3■□□□□ 0.36
PCNX2-209ENST00000475463 ARHGAP23Q9P227 1491 aa17.3■□□□□ 0.36
PCNX2-209ENST00000475463 RRP7AQ9Y3A4 280 aaKnown RBP17.3■□□□□ 0.36
PCNX2-209ENST00000475463 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
PCNX2-209ENST00000475463 U2AF1L5P0DN76 240 aaPredicted RBP17.29■□□□□ 0.36
PCNX2-209ENST00000475463 U2AF1Q01081 240 aaKnown RBP eCLIP17.29■□□□□ 0.36
PCNX2-209ENST00000475463 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
PCNX2-209ENST00000475463 NUDT16Q96DE0 195 aaKnown RBP17.29■□□□□ 0.36
PCNX2-209ENST00000475463 CRBNQ96SW2 442 aa17.29■□□□□ 0.36
PCNX2-209ENST00000475463 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
PCNX2-209ENST00000475463 PNPLA6Q8IY17 1366 aa17.29■□□□□ 0.36
PCNX2-209ENST00000475463 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.28■□□□□ 0.36
PCNX2-209ENST00000475463 CDC42BPGQ6DT37 1551 aa17.28■□□□□ 0.36
PCNX2-209ENST00000475463 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
PCNX2-209ENST00000475463 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.28■□□□□ 0.36
PCNX2-209ENST00000475463 NEUROD2Q15784 382 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms