RNA–Protein interactions for RNA: ENST00000475302.1

ITGA6-210, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 577 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-210ENST00000475302 POTEFA5A3E0 1075 aa13.64□□□□□ -0.23
ITGA6-210ENST00000475302 WASHC2AQ641Q2 1341 aa13.64□□□□□ -0.23
ITGA6-210ENST00000475302 MYOM2P54296 1465 aa13.63□□□□□ -0.23
ITGA6-210ENST00000475302 USP47Q96K76 1375 aa13.63□□□□□ -0.23
ITGA6-210ENST00000475302 RIOK3O14730 519 aaKnown RBP13.63□□□□□ -0.23
ITGA6-210ENST00000475302 KIF1BO60333 1816 aa13.62□□□□□ -0.23
ITGA6-210ENST00000475302 NBPF1Q3BBV0 1214 aa13.62□□□□□ -0.23
ITGA6-210ENST00000475302 PREX1Q8TCU6 1659 aa13.61□□□□□ -0.23
ITGA6-210ENST00000475302 COLQQ9Y215 455 aaPredicted RBP13.61□□□□□ -0.23
ITGA6-210ENST00000475302 RGL2O15211 777 aa13.6□□□□□ -0.23
ITGA6-210ENST00000475302 DDX10Q13206 875 aaKnown RBP13.6□□□□□ -0.23
ITGA6-210ENST00000475302 ZNF326Q5BKZ1 582 aaKnown RBP13.6□□□□□ -0.23
ITGA6-210ENST00000475302 CCDC7Q96M83 1385 aa13.59□□□□□ -0.23
ITGA6-210ENST00000475302 POLR1AO95602 1720 aaPredicted RBP13.59□□□□□ -0.23
ITGA6-210ENST00000475302 KIAA1210Q9ULL0 1709 aa13.59□□□□□ -0.23
ITGA6-210ENST00000475302 ERVK-7P63135 1459 aa13.59□□□□□ -0.23
ITGA6-210ENST00000475302 SPATA31D1Q6ZQQ2 1576 aa13.58□□□□□ -0.23
ITGA6-210ENST00000475302 CARD11Q9BXL7 1154 aa13.58□□□□□ -0.24
ITGA6-210ENST00000475302 SLC52A1Q9NWF4 448 aa13.58□□□□□ -0.24
ITGA6-210ENST00000475302 CLTCQ00610 1675 aaKnown RBP13.58□□□□□ -0.24
ITGA6-210ENST00000475302 RPGRIP1LQ68CZ1 1315 aa13.58□□□□□ -0.24
ITGA6-210ENST00000475302 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.24
ITGA6-210ENST00000475302 IDI1Q13907 227 aa13.57□□□□□ -0.24
ITGA6-210ENST00000475302 IER5LQ5T953 404 aa13.57□□□□□ -0.24
ITGA6-210ENST00000475302 PPLO60437 1756 aa13.57□□□□□ -0.24
ITGA6-210ENST00000475302 KIF7Q2M1P5 1343 aa13.57□□□□□ -0.24
ITGA6-210ENST00000475302 CFAP65Q6ZU64 1925 aaKnown RBP13.56□□□□□ -0.24
ITGA6-210ENST00000475302 FBXO31Q5XUX0 539 aaPredicted RBP13.56□□□□□ -0.24
ITGA6-210ENST00000475302 ADGRF5Q8IZF2 1346 aa13.56□□□□□ -0.24
ITGA6-210ENST00000475302 TMEM131LA2VDJ0 1609 aa13.56□□□□□ -0.24
ITGA6-210ENST00000475302 NEXMIFQ5QGS0 1516 aa13.55□□□□□ -0.24
ITGA6-210ENST00000475302 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
ITGA6-210ENST00000475302 SEC24BO95487 1268 aa13.55□□□□□ -0.24
ITGA6-210ENST00000475302 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
ITGA6-210ENST00000475302 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
ITGA6-210ENST00000475302 IQGAP1P46940 1657 aa13.55□□□□□ -0.24
ITGA6-210ENST00000475302 ARID4BQ4LE39 1312 aaPredicted RBP13.55□□□□□ -0.24
ITGA6-210ENST00000475302 ZFYVE9O95405 1425 aa13.55□□□□□ -0.24
ITGA6-210ENST00000475302 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
ITGA6-210ENST00000475302 VGFO15240 615 aaPredicted RBP13.54□□□□□ -0.24
ITGA6-210ENST00000475302 POTEJP0CG39 1038 aa13.54□□□□□ -0.24
ITGA6-210ENST00000475302 TESK2Q96S53 571 aa13.54□□□□□ -0.24
ITGA6-210ENST00000475302 IRX5P78411 483 aaPredicted RBP13.53□□□□□ -0.24
ITGA6-210ENST00000475302 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
ITGA6-210ENST00000475302 ZMYM3Q14202 1370 aa13.53□□□□□ -0.24
ITGA6-210ENST00000475302 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
ITGA6-210ENST00000475302 GOLGA2Q08379 1002 aa13.52□□□□□ -0.25
ITGA6-210ENST00000475302 SETBP1Q9Y6X0 1596 aa13.51□□□□□ -0.25
ITGA6-210ENST00000475302 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
ITGA6-210ENST00000475302 ADGRB1O14514 1584 aa13.5□□□□□ -0.25
ITGA6-210ENST00000475302 MLECQ14165 292 aa13.5□□□□□ -0.25
ITGA6-210ENST00000475302 SCAF11Q99590 1463 aaKnown RBP13.49□□□□□ -0.25
ITGA6-210ENST00000475302 MKRN3Q13064 507 aaKnown RBP13.49□□□□□ -0.25
ITGA6-210ENST00000475302 CFAP70Q5T0N1 1121 aa13.49□□□□□ -0.25
ITGA6-210ENST00000475302 MYO5BQ9ULV0 1848 aa13.48□□□□□ -0.25
ITGA6-210ENST00000475302 PLCG2P16885 1265 aa13.48□□□□□ -0.25
ITGA6-210ENST00000475302 A2ML1A8K2U0 1454 aa13.48□□□□□ -0.25
ITGA6-210ENST00000475302 CHGAP10645 457 aaKnown RBP13.46□□□□□ -0.25
ITGA6-210ENST00000475302 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
ITGA6-210ENST00000475302 EFCAB3Q8N7B9 438 aa13.45□□□□□ -0.26
ITGA6-210ENST00000475302 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
ITGA6-210ENST00000475302 OCEL1Q9H607 264 aa13.45□□□□□ -0.26
ITGA6-210ENST00000475302 RTN4Q9NQC3 1192 aaKnown RBP13.45□□□□□ -0.26
ITGA6-210ENST00000475302 MYO3AQ8NEV4 1616 aa13.44□□□□□ -0.26
ITGA6-210ENST00000475302 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
ITGA6-210ENST00000475302 DISP3Q9P2K9 1392 aa13.44□□□□□ -0.26
ITGA6-210ENST00000475302 CCER2I3L3R5 266 aa13.43□□□□□ -0.26
ITGA6-210ENST00000475302 PDCD7Q8N8D1 485 aaKnown RBP13.43□□□□□ -0.26
ITGA6-210ENST00000475302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.43□□□□□ -0.266e-9■□□□□ 10
ITGA6-210ENST00000475302 ASXL1Q8IXJ9 1541 aa13.43□□□□□ -0.26
ITGA6-210ENST00000475302 TNRQ92752 1358 aa13.42□□□□□ -0.26
ITGA6-210ENST00000475302 SBNO2Q9Y2G9 1366 aa13.42□□□□□ -0.26
ITGA6-210ENST00000475302 C3P01024 1663 aa13.41□□□□□ -0.26
ITGA6-210ENST00000475302 TAOK2Q9UL54 1235 aa13.41□□□□□ -0.26
ITGA6-210ENST00000475302 STK24Q9Y6E0 443 aa13.41□□□□□ -0.26
ITGA6-210ENST00000475302 STK25O00506 426 aa13.4□□□□□ -0.26
ITGA6-210ENST00000475302 ANP32CO43423 234 aa13.4□□□□□ -0.26
ITGA6-210ENST00000475302 ESF1Q9H501 851 aaKnown RBP13.39□□□□□ -0.27
ITGA6-210ENST00000475302 UBR1Q8IWV7 1749 aa13.39□□□□□ -0.27
ITGA6-210ENST00000475302 RIMS2Q9UQ26 1411 aa13.39□□□□□ -0.27
ITGA6-210ENST00000475302 FER1L4A9Z1Z3 1794 aa13.38□□□□□ -0.27
ITGA6-210ENST00000475302 NLRP1Q9C000 1473 aa13.38□□□□□ -0.27
ITGA6-210ENST00000475302 PER1O15534 1290 aaPredicted RBP13.38□□□□□ -0.27
ITGA6-210ENST00000475302 NUTM2DQ5VT03 806 aaPredicted RBP13.38□□□□□ -0.27
ITGA6-210ENST00000475302 ILDR1Q86SU0 546 aaPredicted RBP13.38□□□□□ -0.27
ITGA6-210ENST00000475302 PRKRIP1Q9H875 184 aaPredicted RBP13.38□□□□□ -0.27
ITGA6-210ENST00000475302 SETD1AO15047 1707 aaKnown RBP13.38□□□□□ -0.27
ITGA6-210ENST00000475302 ADAMTSL3P82987 1691 aa13.37□□□□□ -0.27
ITGA6-210ENST00000475302 PTPRMP28827 1452 aa13.37□□□□□ -0.27
ITGA6-210ENST00000475302 EIF3AQ14152 1382 aaKnown RBP13.37□□□□□ -0.27
ITGA6-210ENST00000475302 CEBPAP49715 358 aaPredicted RBP13.37□□□□□ -0.27
ITGA6-210ENST00000475302 TMF1P82094 1093 aa13.37□□□□□ -0.27
ITGA6-210ENST00000475302 TMEM132EQ6IEE7 984 aa13.37□□□□□ -0.27
ITGA6-210ENST00000475302 ALKQ9UM73 1620 aa13.37□□□□□ -0.27
ITGA6-210ENST00000475302 NRXN3Q9Y4C0 1643 aa13.37□□□□□ -0.27
ITGA6-210ENST00000475302 DPY19L2Q6NUT2 758 aa13.36□□□□□ -0.27
ITGA6-210ENST00000475302 ARHGEF28Q8N1W1 1705 aaKnown RBP13.35□□□□□ -0.27
ITGA6-210ENST00000475302 TMEM2Q9UHN6 1383 aa13.34□□□□□ -0.27
ITGA6-210ENST00000475302 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
ITGA6-210ENST00000475302 ARHGAP23Q9P227 1491 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms