RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.19
PDPN-204ENST00000475043 ANKRD30BQ9BXX2 1392 aa13.89□□□□□ -0.19
PDPN-204ENST00000475043 DCCP43146 1447 aa13.89□□□□□ -0.19
PDPN-204ENST00000475043 ADGRL3Q9HAR2 1447 aa13.87□□□□□ -0.19
PDPN-204ENST00000475043 PTCH1Q13635 1447 aa13.86□□□□□ -0.19
PDPN-204ENST00000475043 COL16A1Q07092 1604 aaPredicted RBP13.86□□□□□ -0.19
PDPN-204ENST00000475043 ROBO2Q9HCK4 1378 aa13.85□□□□□ -0.19
PDPN-204ENST00000475043 MST1RQ04912 1400 aa13.84□□□□□ -0.19
PDPN-204ENST00000475043 AHDC1Q5TGY3 1603 aaPredicted RBP13.84□□□□□ -0.19
PDPN-204ENST00000475043 BRINP3Q76B58 766 aa13.84□□□□□ -0.19
PDPN-204ENST00000475043 REM2Q8IYK8 340 aaPredicted RBP13.84□□□□□ -0.19
PDPN-204ENST00000475043 STK26Q9P289 416 aa13.84□□□□□ -0.19
PDPN-204ENST00000475043 PIK3C2GO75747 1445 aa13.83□□□□□ -0.2
PDPN-204ENST00000475043 HRCP23327 699 aa13.83□□□□□ -0.2
PDPN-204ENST00000475043 MKRN4PQ13434 485 aaPredicted RBP13.83□□□□□ -0.2
PDPN-204ENST00000475043 TMEM132EQ6IEE7 984 aa13.83□□□□□ -0.2
PDPN-204ENST00000475043 ASXL1Q8IXJ9 1541 aa13.83□□□□□ -0.2
PDPN-204ENST00000475043 JCADQ9P266 1359 aa13.83□□□□□ -0.2
PDPN-204ENST00000475043 SOCS7O14512 581 aa13.82□□□□□ -0.2
PDPN-204ENST00000475043 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
PDPN-204ENST00000475043 LAMC1P11047 1609 aa13.81□□□□□ -0.2
PDPN-204ENST00000475043 NHSL1Q5SYE7 1610 aa13.81□□□□□ -0.2
PDPN-204ENST00000475043 KNDC1Q76NI1 1749 aa13.81□□□□□ -0.2
PDPN-204ENST00000475043 MYOM2P54296 1465 aa13.8□□□□□ -0.2
PDPN-204ENST00000475043 SHPRHQ149N8 1683 aa13.79□□□□□ -0.2
PDPN-204ENST00000475043 SPDYE2BA6NHP3 402 aa13.79□□□□□ -0.2
PDPN-204ENST00000475043 SPDYE6P0CI01 402 aa13.79□□□□□ -0.2
PDPN-204ENST00000475043 SPDYE2Q495Y8 402 aa13.79□□□□□ -0.2
PDPN-204ENST00000475043 WAPLQ7Z5K2 1190 aa13.79□□□□□ -0.2
PDPN-204ENST00000475043 KDM2AQ9Y2K7 1162 aa13.79□□□□□ -0.2
PDPN-204ENST00000475043 LRPPRCP42704 1394 aaKnown RBP13.79□□□□□ -0.2
PDPN-204ENST00000475043 C1orf167Q5SNV9 1468 aa13.79□□□□□ -0.2
PDPN-204ENST00000475043 CFAP70Q5T0N1 1121 aa13.78□□□□□ -0.2
PDPN-204ENST00000475043 DDX17Q92841 729 aaKnown RBP13.78□□□□□ -0.2
PDPN-204ENST00000475043 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
PDPN-204ENST00000475043 TECPR2O15040 1411 aa13.78□□□□□ -0.2
PDPN-204ENST00000475043 YTHDC2Q9H6S0 1430 aaKnown RBP13.78□□□□□ -0.2
PDPN-204ENST00000475043 NRXN1Q9ULB1 1477 aa13.78□□□□□ -0.2
PDPN-204ENST00000475043 CDC42BPGQ6DT37 1551 aa13.77□□□□□ -0.21
PDPN-204ENST00000475043 DCAF11Q8TEB1 546 aa13.77□□□□□ -0.21
PDPN-204ENST00000475043 ABCC11Q96J66 1382 aa13.77□□□□□ -0.21
PDPN-204ENST00000475043 DHX57Q6P158 1386 aaKnown RBP13.76□□□□□ -0.21
PDPN-204ENST00000475043 SPATA31A6Q5VVP1 1343 aa13.76□□□□□ -0.21
PDPN-204ENST00000475043 MEX3CQ5U5Q3 659 aaKnown RBP13.76□□□□□ -0.21
PDPN-204ENST00000475043 ORAI2Q96SN7 254 aa13.76□□□□□ -0.21
PDPN-204ENST00000475043 RGS17Q9UGC6 210 aaPredicted RBP13.76□□□□□ -0.21
PDPN-204ENST00000475043 PLEKHH1Q9ULM0 1364 aa13.75□□□□□ -0.21
PDPN-204ENST00000475043 NUTM2BA6NNL0 878 aaPredicted RBP13.75□□□□□ -0.21
PDPN-204ENST00000475043 NUTM2EB1AL46 878 aaPredicted RBP13.75□□□□□ -0.21
PDPN-204ENST00000475043 NUTM2AQ8IVF1 878 aaPredicted RBP13.75□□□□□ -0.21
PDPN-204ENST00000475043 LRRC59Q96AG4 307 aaKnown RBP13.75□□□□□ -0.21
PDPN-204ENST00000475043 NUTM2FA1L443 756 aa13.74□□□□□ -0.21
PDPN-204ENST00000475043 ESCO1Q5FWF5 840 aa13.74□□□□□ -0.21
PDPN-204ENST00000475043 LRP6O75581 1613 aa13.74□□□□□ -0.21
PDPN-204ENST00000475043 SAFB2Q14151 953 aaKnown RBP eCLIP13.72□□□□□ -0.21
PDPN-204ENST00000475043 FMN2Q9NZ56 1722 aa13.72□□□□□ -0.21
PDPN-204ENST00000475043 POTEAQ6S8J7 498 aa13.71□□□□□ -0.21
PDPN-204ENST00000475043 PRAM1Q96QH2 718 aa13.71□□□□□ -0.21
PDPN-204ENST00000475043 POGKQ9P215 609 aa13.71□□□□□ -0.21
PDPN-204ENST00000475043 SIRT1Q96EB6 747 aa13.7□□□□□ -0.22
PDPN-204ENST00000475043 STAC3Q96MF2 364 aa13.7□□□□□ -0.22
PDPN-204ENST00000475043 RGPD8O14715 1765 aaPredicted RBP13.7□□□□□ -0.22
PDPN-204ENST00000475043 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
PDPN-204ENST00000475043 TRAK1Q9UPV9 953 aa13.69□□□□□ -0.22
PDPN-204ENST00000475043 ADGRB1O14514 1584 aa13.69□□□□□ -0.22
PDPN-204ENST00000475043 PNPLA6Q8IY17 1366 aa13.69□□□□□ -0.22
PDPN-204ENST00000475043 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
PDPN-204ENST00000475043 NPHP3Q7Z494 1330 aa13.68□□□□□ -0.22
PDPN-204ENST00000475043 FOXO3O43524 673 aa13.68□□□□□ -0.22
PDPN-204ENST00000475043 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
PDPN-204ENST00000475043 KIF1AQ12756 1690 aa13.67□□□□□ -0.22
PDPN-204ENST00000475043 XPCQ01831 940 aaPredicted RBP13.67□□□□□ -0.22
PDPN-204ENST00000475043 ZNF772Q68DY9 489 aaPredicted RBP13.66□□□□□ -0.22
PDPN-204ENST00000475043 C8orf37Q96NL8 207 aa13.65□□□□□ -0.22
PDPN-204ENST00000475043 HIRIP3Q9BW71 556 aaPredicted RBP13.65□□□□□ -0.22
PDPN-204ENST00000475043 PXDNQ92626 1479 aa13.65□□□□□ -0.22
PDPN-204ENST00000475043 ARHGEF28Q8N1W1 1705 aaKnown RBP13.64□□□□□ -0.23
PDPN-204ENST00000475043 ADAMTS2O95450 1211 aa13.64□□□□□ -0.23
PDPN-204ENST00000475043 AFF2P51816 1311 aa13.64□□□□□ -0.23
PDPN-204ENST00000475043 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
PDPN-204ENST00000475043 ADGRB2O60241 1585 aa13.63□□□□□ -0.23
PDPN-204ENST00000475043 ZNF692Q9BU19 519 aaPredicted RBP13.63□□□□□ -0.23
PDPN-204ENST00000475043 SSUH2Q9Y2M2 353 aa13.63□□□□□ -0.23
PDPN-204ENST00000475043 KIAA1210Q9ULL0 1709 aa13.63□□□□□ -0.23
PDPN-204ENST00000475043 COL22A1Q8NFW1 1626 aaPredicted RBP13.63□□□□□ -0.23
PDPN-204ENST00000475043 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
PDPN-204ENST00000475043 USP32Q8NFA0 1604 aa13.61□□□□□ -0.23
PDPN-204ENST00000475043 NEUROD1Q13562 356 aa13.61□□□□□ -0.23
PDPN-204ENST00000475043 KRT28Q7Z3Y7 464 aa13.61□□□□□ -0.23
PDPN-204ENST00000475043 NGLY1Q96IV0 654 aa13.61□□□□□ -0.23
PDPN-204ENST00000475043 SIN3AQ96ST3 1273 aa13.61□□□□□ -0.23
PDPN-204ENST00000475043 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
PDPN-204ENST00000475043 PMFBP1Q8TBY8 1022 aa13.6□□□□□ -0.23
PDPN-204ENST00000475043 MARF1Q9Y4F3 1742 aaKnown RBP13.59□□□□□ -0.23
PDPN-204ENST00000475043 ANKARQ7Z5J8 1434 aa13.59□□□□□ -0.23
PDPN-204ENST00000475043 RXRBP28702 533 aa13.59□□□□□ -0.23
PDPN-204ENST00000475043 PSME1Q06323 249 aa13.59□□□□□ -0.23
PDPN-204ENST00000475043 EIF3AQ14152 1382 aaKnown RBP13.58□□□□□ -0.23
PDPN-204ENST00000475043 WASLO00401 505 aaPredicted RBP13.58□□□□□ -0.24
PDPN-204ENST00000475043 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms