RNA–Protein interactions for RNA: ENST00000474993.5

NPM3-204, Transcript of nucleophosmin/nucleoplasmin 3, humanhuman

TSL 2

Gene NPM3, Length 755 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM3-204ENST00000474993 EVC2Q86UK5 1308 aa28.68■■■□□ 2.18
NPM3-204ENST00000474993 C14orf37Q86TY3 774 aa28.67■■■□□ 2.18
NPM3-204ENST00000474993 MINK1Q8N4C8 1332 aaPredicted RBP28.67■■■□□ 2.18
NPM3-204ENST00000474993 QRICH2Q9H0J4 1663 aa28.65■■■□□ 2.18
NPM3-204ENST00000474993 ZNF316A6NFI3 1004 aaPredicted RBP28.65■■■□□ 2.18
NPM3-204ENST00000474993 TMEM94Q12767 1356 aa28.63■■■□□ 2.17
NPM3-204ENST00000474993 PUS7Q96PZ0 661 aaKnown RBP28.62■■■□□ 2.17
NPM3-204ENST00000474993 STRCP1A6NGW2 1772 aa28.61■■■□□ 2.17
NPM3-204ENST00000474993 ADGRL3Q9HAR2 1447 aa28.6■■■□□ 2.17
NPM3-204ENST00000474993 WASLO00401 505 aaPredicted RBP28.6■■■□□ 2.17
NPM3-204ENST00000474993 C19orf44Q9H6X5 657 aa28.6■■■□□ 2.17
NPM3-204ENST00000474993 LRRC7Q96NW7 1537 aa28.59■■■□□ 2.17
NPM3-204ENST00000474993 RBM33Q96EV2 1170 aaKnown RBP28.57■■■□□ 2.16
NPM3-204ENST00000474993 CDK19Q9BWU1 502 aa28.57■■■□□ 2.16
NPM3-204ENST00000474993 ADGRB2O60241 1585 aa28.56■■■□□ 2.16
NPM3-204ENST00000474993 MSH6P52701 1360 aa28.56■■■□□ 2.16
NPM3-204ENST00000474993 SRPK2P78362 688 aaKnown RBP28.56■■■□□ 2.16
NPM3-204ENST00000474993 ILDR1Q86SU0 546 aaPredicted RBP28.56■■■□□ 2.16
NPM3-204ENST00000474993 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.55■■■□□ 2.16
NPM3-204ENST00000474993 DISP3Q9P2K9 1392 aa28.54■■■□□ 2.16
NPM3-204ENST00000474993 LTBP4Q8N2S1 1624 aa28.54■■■□□ 2.16
NPM3-204ENST00000474993 ATF3P18847 181 aa28.53■■■□□ 2.16
NPM3-204ENST00000474993 DCCP43146 1447 aa28.52■■■□□ 2.16
NPM3-204ENST00000474993 CADPS2Q86UW7 1296 aa28.51■■■□□ 2.15
NPM3-204ENST00000474993 ATAD2Q6PL18 1390 aa28.5■■■□□ 2.15
NPM3-204ENST00000474993 KIF7Q2M1P5 1343 aa28.5■■■□□ 2.15
NPM3-204ENST00000474993 TULP4Q9NRJ4 1543 aa28.5■■■□□ 2.15
NPM3-204ENST00000474993 POLR3GLQ9BT43 218 aa28.5■■■□□ 2.15
NPM3-204ENST00000474993 CDC42BPGQ6DT37 1551 aa28.5■■■□□ 2.15
NPM3-204ENST00000474993 CCDC7Q96M83 1385 aa28.5■■■□□ 2.15
NPM3-204ENST00000474993 C11orf95C9JLR9 678 aaPredicted RBP28.49■■■□□ 2.15
NPM3-204ENST00000474993 CABP2Q9NPB3 220 aa28.49■■■□□ 2.15
NPM3-204ENST00000474993 NALCNQ8IZF0 1738 aa28.47■■■□□ 2.15
NPM3-204ENST00000474993 WASHC2AQ641Q2 1341 aa28.46■■■□□ 2.15
NPM3-204ENST00000474993 ANKARQ7Z5J8 1434 aa28.45■■■□□ 2.15
NPM3-204ENST00000474993 NUDT16Q96DE0 195 aaKnown RBP28.45■■■□□ 2.14
NPM3-204ENST00000474993 CCDC61Q9Y6R9 512 aa28.44■■■□□ 2.14
NPM3-204ENST00000474993 NINLQ9Y2I6 1382 aa28.44■■■□□ 2.14
NPM3-204ENST00000474993 TMC1Q8TDI8 760 aa28.4■■■□□ 2.14
NPM3-204ENST00000474993 XIRP1Q702N8 1843 aaKnown RBP28.39■■■□□ 2.14
NPM3-204ENST00000474993 IQSEC2Q5JU85 1478 aa28.39■■■□□ 2.13
NPM3-204ENST00000474993 FMN2Q9NZ56 1722 aa28.38■■■□□ 2.13
NPM3-204ENST00000474993 NUTM2FA1L443 756 aa28.38■■■□□ 2.13
NPM3-204ENST00000474993 ATP7BP35670 1465 aa28.36■■■□□ 2.13
NPM3-204ENST00000474993 PRR36Q9H6K5 1346 aa28.36■■■□□ 2.13
NPM3-204ENST00000474993 CERKQ8TCT0 537 aa28.35■■■□□ 2.13
NPM3-204ENST00000474993 CABP1Q9NZU7 370 aa28.35■■■□□ 2.13
NPM3-204ENST00000474993 TERF2IPQ9NYB0 399 aa28.34■■■□□ 2.13
NPM3-204ENST00000474993 PPIP5K1Q6PFW1 1433 aa28.34■■■□□ 2.13
NPM3-204ENST00000474993 PLEKHG3A1L390 1219 aa28.33■■■□□ 2.13
NPM3-204ENST00000474993 SLAIN2Q9P270 581 aa28.33■■■□□ 2.13
NPM3-204ENST00000474993 MST1RQ04912 1400 aa28.33■■■□□ 2.13
NPM3-204ENST00000474993 C1orf167Q5SNV9 1468 aa28.33■■■□□ 2.13
NPM3-204ENST00000474993 ESCO1Q5FWF5 840 aa28.32■■■□□ 2.12
NPM3-204ENST00000474993 HDGFL2Q7Z4V5 671 aaPredicted RBP28.32■■■□□ 2.12
NPM3-204ENST00000474993 SLC12A5Q9H2X9 1139 aa28.32■■■□□ 2.12
NPM3-204ENST00000474993 TOM1O60784 492 aa28.31■■■□□ 2.12
NPM3-204ENST00000474993 PHF8Q9UPP1 1060 aa28.3■■■□□ 2.12
NPM3-204ENST00000474993 DDX10Q13206 875 aaKnown RBP28.29■■■□□ 2.12
NPM3-204ENST00000474993 ZNF692Q9BU19 519 aaPredicted RBP28.29■■■□□ 2.12
NPM3-204ENST00000474993 ITSN1Q15811 1721 aa28.29■■■□□ 2.12
NPM3-204ENST00000474993 NGDNQ8NEJ9 315 aaKnown RBP28.27■■■□□ 2.12
NPM3-204ENST00000474993 USP32Q8NFA0 1604 aa28.27■■■□□ 2.12
NPM3-204ENST00000474993 ANKRD36BQ8N2N9 1353 aa28.26■■■□□ 2.12
NPM3-204ENST00000474993 PANK3Q9H999 370 aa28.26■■■□□ 2.11
NPM3-204ENST00000474993 TOPAZ1Q8N9V7 1692 aa28.24■■■□□ 2.11
NPM3-204ENST00000474993 PMFBP1Q8TBY8 1022 aa28.24■■■□□ 2.11
NPM3-204ENST00000474993 ORAI2Q96SN7 254 aa28.24■■■□□ 2.11
NPM3-204ENST00000474993 ACEP12821 1306 aa28.23■■■□□ 2.11
NPM3-204ENST00000474993 POLR3AO14802 1390 aaPredicted RBP28.22■■■□□ 2.11
NPM3-204ENST00000474993 UBAP1LF5GYI3 381 aa28.21■■■□□ 2.11
NPM3-204ENST00000474993 MYOM1P52179 1685 aa28.2■■■□□ 2.11
NPM3-204ENST00000474993 CPSF1Q10570 1443 aaKnown RBP28.19■■■□□ 2.1
NPM3-204ENST00000474993 BRINP3Q76B58 766 aa28.19■■■□□ 2.1
NPM3-204ENST00000474993 KNSTRNQ9Y448 316 aa28.19■■■□□ 2.1
NPM3-204ENST00000474993 A0A1W2PP64 1363 aa28.19■■■□□ 2.1
NPM3-204ENST00000474993 KTN1Q86UP2 1357 aaKnown RBP28.19■■■□□ 2.1
NPM3-204ENST00000474993 KIF1AQ12756 1690 aa28.19■■■□□ 2.1
NPM3-204ENST00000474993 PSME1Q06323 249 aa28.18■■■□□ 2.1
NPM3-204ENST00000474993 BRD4O60885 1362 aaPredicted RBP28.18■■■□□ 2.1
NPM3-204ENST00000474993 NPHP3Q7Z494 1330 aa28.18■■■□□ 2.1
NPM3-204ENST00000474993 RGPD8O14715 1765 aaPredicted RBP28.17■■■□□ 2.1
NPM3-204ENST00000474993 CD163L1Q9NR16 1453 aa28.15■■■□□ 2.1
NPM3-204ENST00000474993 FOXO3O43524 673 aa28.15■■■□□ 2.1
NPM3-204ENST00000474993 EDC4Q6P2E9 1401 aaKnown RBP28.13■■■□□ 2.09
NPM3-204ENST00000474993 USP6P35125 1406 aa28.12■■■□□ 2.09
NPM3-204ENST00000474993 CARD14Q9BXL6 1004 aa28.12■■■□□ 2.09
NPM3-204ENST00000474993 CGNL1Q0VF96 1302 aa28.12■■■□□ 2.09
NPM3-204ENST00000474993 PER1O15534 1290 aaPredicted RBP28.11■■■□□ 2.09
NPM3-204ENST00000474993 NSD3Q9BZ95 1437 aa28.1■■■□□ 2.09
NPM3-204ENST00000474993 KRT28Q7Z3Y7 464 aa28.1■■■□□ 2.09
NPM3-204ENST00000474993 PIP4K2BP78356 416 aa28.09■■■□□ 2.09
NPM3-204ENST00000474993 TTC21AQ8NDW8 1320 aa28.09■■■□□ 2.09
NPM3-204ENST00000474993 SCAF1Q9H7N4 1312 aaKnown RBP28.08■■■□□ 2.09
NPM3-204ENST00000474993 AKAP12Q02952 1782 aa28.07■■■□□ 2.08
NPM3-204ENST00000474993 TTC21BQ7Z4L5 1316 aa28.07■■■□□ 2.08
NPM3-204ENST00000474993 PAK3O75914 559 aaPredicted RBP28.05■■■□□ 2.08
NPM3-204ENST00000474993 DIEXFQ68CQ4 756 aaKnown RBP28.05■■■□□ 2.08
NPM3-204ENST00000474993 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.05■■■□□ 2.08
NPM3-204ENST00000474993 NSD2O96028 1365 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms