RNA–Protein interactions for RNA: ENST00000474873.5

HPS1-210, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 2

Gene HPS1, Length 698 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-210ENST00000474873 PRAM1Q96QH2 718 aa11.49□□□□□ -0.57
HPS1-210ENST00000474873 TRAK1Q9UPV9 953 aa11.49□□□□□ -0.57
HPS1-210ENST00000474873 SCAF1Q9H7N4 1312 aaKnown RBP11.49□□□□□ -0.57
HPS1-210ENST00000474873 KNDC1Q76NI1 1749 aa11.49□□□□□ -0.57
HPS1-210ENST00000474873 NBPF8Q3BBV2 869 aa11.48□□□□□ -0.57
HPS1-210ENST00000474873 POGKQ9P215 609 aa11.48□□□□□ -0.57
HPS1-210ENST00000474873 DLC1Q96QB1 1528 aa11.48□□□□□ -0.57
HPS1-210ENST00000474873 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.48□□□□□ -0.57
HPS1-210ENST00000474873 PLEKHH1Q9ULM0 1364 aa11.47□□□□□ -0.57
HPS1-210ENST00000474873 SRCAPQ6ZRS2 3230 aa11.45□□□□□ -0.58
HPS1-210ENST00000474873 NALCNQ8IZF0 1738 aa11.45□□□□□ -0.58
HPS1-210ENST00000474873 ROCK2O75116 1388 aaKnown RBP11.44□□□□□ -0.58
HPS1-210ENST00000474873 SAFB2Q14151 953 aaKnown RBP eCLIP11.44□□□□□ -0.58
HPS1-210ENST00000474873 RGS17Q9UGC6 210 aaPredicted RBP11.44□□□□□ -0.58
HPS1-210ENST00000474873 MST1RQ04912 1400 aa11.43□□□□□ -0.58
HPS1-210ENST00000474873 GPRASP1Q5JY77 1395 aa11.43□□□□□ -0.58
HPS1-210ENST00000474873 TRPM1Q7Z4N2 1603 aa11.43□□□□□ -0.58
HPS1-210ENST00000474873 CDC42BPGQ6DT37 1551 aa11.42□□□□□ -0.58
HPS1-210ENST00000474873 BRINP3Q76B58 766 aa11.42□□□□□ -0.58
HPS1-210ENST00000474873 C1orf167Q5SNV9 1468 aa11.42□□□□□ -0.58
HPS1-210ENST00000474873 ROBO1Q9Y6N7 1651 aa11.41□□□□□ -0.58
HPS1-210ENST00000474873 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
HPS1-210ENST00000474873 MINK1Q8N4C8 1332 aaPredicted RBP11.4□□□□□ -0.58
HPS1-210ENST00000474873 CENPJQ9HC77 1338 aaPredicted RBP11.4□□□□□ -0.58
HPS1-210ENST00000474873 RALGAPBQ86X10 1494 aa11.4□□□□□ -0.58
HPS1-210ENST00000474873 WASLO00401 505 aaPredicted RBP11.4□□□□□ -0.58
HPS1-210ENST00000474873 HIRIP3Q9BW71 556 aaPredicted RBP11.4□□□□□ -0.58
HPS1-210ENST00000474873 ARHGEF28Q8N1W1 1705 aaKnown RBP11.4□□□□□ -0.58
HPS1-210ENST00000474873 EIF3AQ14152 1382 aaKnown RBP11.4□□□□□ -0.59
HPS1-210ENST00000474873 ESCO1Q5FWF5 840 aa11.39□□□□□ -0.59
HPS1-210ENST00000474873 ORAI2Q96SN7 254 aa11.39□□□□□ -0.59
HPS1-210ENST00000474873 ADGRB2O60241 1585 aa11.38□□□□□ -0.59
HPS1-210ENST00000474873 NUTM2FA1L443 756 aa11.38□□□□□ -0.59
HPS1-210ENST00000474873 ANKARQ7Z5J8 1434 aa11.36□□□□□ -0.59
HPS1-210ENST00000474873 FMN2Q9NZ56 1722 aa11.36□□□□□ -0.59
HPS1-210ENST00000474873 CDK19Q9BWU1 502 aa11.36□□□□□ -0.59
HPS1-210ENST00000474873 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
HPS1-210ENST00000474873 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
HPS1-210ENST00000474873 SBNO2Q9Y2G9 1366 aa11.34□□□□□ -0.59
HPS1-210ENST00000474873 FOXO3O43524 673 aa11.34□□□□□ -0.59
HPS1-210ENST00000474873 LRRC59Q96AG4 307 aaKnown RBP11.34□□□□□ -0.59
HPS1-210ENST00000474873 NUDT16Q96DE0 195 aaKnown RBP11.34□□□□□ -0.59
HPS1-210ENST00000474873 PHF8Q9UPP1 1060 aa11.34□□□□□ -0.59
HPS1-210ENST00000474873 SOS2Q07890 1332 aaPredicted RBP11.34□□□□□ -0.59
HPS1-210ENST00000474873 EVC2Q86UK5 1308 aa11.34□□□□□ -0.59
HPS1-210ENST00000474873 PRR36Q9H6K5 1346 aa11.34□□□□□ -0.59
HPS1-210ENST00000474873 PHLPP1O60346 1717 aa11.33□□□□□ -0.6
HPS1-210ENST00000474873 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
HPS1-210ENST00000474873 DDX17Q92841 729 aaKnown RBP11.33□□□□□ -0.6
HPS1-210ENST00000474873 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
HPS1-210ENST00000474873 TULP4Q9NRJ4 1543 aa11.33□□□□□ -0.6
HPS1-210ENST00000474873 NHSL1Q5SYE7 1610 aa11.32□□□□□ -0.6
HPS1-210ENST00000474873 ST20-MTHFSA0A0A6YYL1 179 aa11.32□□□□□ -0.6
HPS1-210ENST00000474873 SRPK2P78362 688 aaKnown RBP11.32□□□□□ -0.6
HPS1-210ENST00000474873 POTEAQ6S8J7 498 aa11.32□□□□□ -0.6
HPS1-210ENST00000474873 QRICH2Q9H0J4 1663 aa11.32□□□□□ -0.6
HPS1-210ENST00000474873 COL16A1Q07092 1604 aaPredicted RBP11.31□□□□□ -0.6
HPS1-210ENST00000474873 JCADQ9P266 1359 aa11.31□□□□□ -0.6
HPS1-210ENST00000474873 PMFBP1Q8TBY8 1022 aa11.31□□□□□ -0.6
HPS1-210ENST00000474873 CABP2Q9NPB3 220 aa11.31□□□□□ -0.6
HPS1-210ENST00000474873 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
HPS1-210ENST00000474873 KIF1AQ12756 1690 aa11.3□□□□□ -0.6
HPS1-210ENST00000474873 USP47Q96K76 1375 aa11.3□□□□□ -0.6
HPS1-210ENST00000474873 PLEKHG3A1L390 1219 aa11.3□□□□□ -0.6
HPS1-210ENST00000474873 PSME1Q06323 249 aa11.3□□□□□ -0.6
HPS1-210ENST00000474873 KRT28Q7Z3Y7 464 aa11.3□□□□□ -0.6
HPS1-210ENST00000474873 TESK2Q96S53 571 aa11.3□□□□□ -0.6
HPS1-210ENST00000474873 RGPD8O14715 1765 aaPredicted RBP11.3□□□□□ -0.6
HPS1-210ENST00000474873 ATP7BP35670 1465 aa11.3□□□□□ -0.6
HPS1-210ENST00000474873 NGDNQ8NEJ9 315 aaKnown RBP11.29□□□□□ -0.6
HPS1-210ENST00000474873 PUS7Q96PZ0 661 aaKnown RBP11.29□□□□□ -0.6
HPS1-210ENST00000474873 PXDNQ92626 1479 aa11.29□□□□□ -0.6
HPS1-210ENST00000474873 XPCQ01831 940 aaPredicted RBP11.28□□□□□ -0.6
HPS1-210ENST00000474873 SPATA31A6Q5VVP1 1343 aa11.28□□□□□ -0.6
HPS1-210ENST00000474873 CABP1Q9NZU7 370 aa11.27□□□□□ -0.61
HPS1-210ENST00000474873 SPATA31A3Q5VYP0 1347 aa11.27□□□□□ -0.61
HPS1-210ENST00000474873 POLR3AO14802 1390 aaPredicted RBP11.27□□□□□ -0.61
HPS1-210ENST00000474873 ATAD2Q6PL18 1390 aa11.27□□□□□ -0.61
HPS1-210ENST00000474873 ITSN1Q15811 1721 aa11.26□□□□□ -0.61
HPS1-210ENST00000474873 EIF4G2P78344 907 aaKnown RBP eCLIP11.26□□□□□ -0.61
HPS1-210ENST00000474873 UPF1Q92900 1129 aaKnown RBP eCLIP11.26□□□□□ -0.61
HPS1-210ENST00000474873 ACEP12821 1306 aa11.26□□□□□ -0.61
HPS1-210ENST00000474873 SBNO1A3KN83 1393 aa11.26□□□□□ -0.61
HPS1-210ENST00000474873 PNPLA6Q8IY17 1366 aa11.26□□□□□ -0.61
HPS1-210ENST00000474873 PPIP5K1Q6PFW1 1433 aa11.26□□□□□ -0.61
HPS1-210ENST00000474873 TMF1P82094 1093 aa11.25□□□□□ -0.61
HPS1-210ENST00000474873 SHPRHQ149N8 1683 aa11.24□□□□□ -0.61
HPS1-210ENST00000474873 TOPAZ1Q8N9V7 1692 aa11.24□□□□□ -0.61
HPS1-210ENST00000474873 CDCA8Q53HL2 280 aa11.24□□□□□ -0.61
HPS1-210ENST00000474873 ZNF692Q9BU19 519 aaPredicted RBP11.23□□□□□ -0.61
HPS1-210ENST00000474873 ARHGEF10O15013 1369 aa11.23□□□□□ -0.61
HPS1-210ENST00000474873 BRD4O60885 1362 aaPredicted RBP11.23□□□□□ -0.61
HPS1-210ENST00000474873 TNS3Q68CZ2 1445 aa11.23□□□□□ -0.61
HPS1-210ENST00000474873 NUTM2BA6NNL0 878 aaPredicted RBP11.22□□□□□ -0.61
HPS1-210ENST00000474873 NUTM2EB1AL46 878 aaPredicted RBP11.22□□□□□ -0.61
HPS1-210ENST00000474873 PAK3O75914 559 aaPredicted RBP11.22□□□□□ -0.61
HPS1-210ENST00000474873 HSPA5P11021 654 aaKnown RBP11.22□□□□□ -0.61
HPS1-210ENST00000474873 NUTM2AQ8IVF1 878 aaPredicted RBP11.22□□□□□ -0.61
HPS1-210ENST00000474873 IFFO2Q5TF58 517 aa11.21□□□□□ -0.61
HPS1-210ENST00000474873 LMOD2Q6P5Q4 547 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms