RNA–Protein interactions for RNA: ENST00000474734.5

CACFD1-204, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2

Gene CACFD1, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-204ENST00000474734 NRXN1Q9ULB1 1477 aa26.5■■□□□ 1.83
CACFD1-204ENST00000474734 ROBO2Q9HCK4 1378 aa26.5■■□□□ 1.83
CACFD1-204ENST00000474734 DDX17Q92841 729 aaKnown RBP26.5■■□□□ 1.83
CACFD1-204ENST00000474734 RXRBP28702 533 aa26.49■■□□□ 1.83
CACFD1-204ENST00000474734 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
CACFD1-204ENST00000474734 NHSL1Q5SYE7 1610 aa26.49■■□□□ 1.83
CACFD1-204ENST00000474734 NALCNQ8IZF0 1738 aa26.48■■□□□ 1.83
CACFD1-204ENST00000474734 ADGRF5Q8IZF2 1346 aa26.47■■□□□ 1.83
CACFD1-204ENST00000474734 PIK3C2GO75747 1445 aa26.47■■□□□ 1.83
CACFD1-204ENST00000474734 AFF2P51816 1311 aa26.46■■□□□ 1.83
CACFD1-204ENST00000474734 PTCH1Q13635 1447 aa26.46■■□□□ 1.83
CACFD1-204ENST00000474734 PRAG1Q86YV5 1406 aa26.46■■□□□ 1.83
CACFD1-204ENST00000474734 C1orf167Q5SNV9 1468 aa26.42■■□□□ 1.82
CACFD1-204ENST00000474734 UPF1Q92900 1129 aaKnown RBP eCLIP26.42■■□□□ 1.82
CACFD1-204ENST00000474734 C8orf37Q96NL8 207 aa26.42■■□□□ 1.82
CACFD1-204ENST00000474734 LAMC1P11047 1609 aa26.42■■□□□ 1.82
CACFD1-204ENST00000474734 PNPLA6Q8IY17 1366 aa26.42■■□□□ 1.82
CACFD1-204ENST00000474734 KIAA1210Q9ULL0 1709 aa26.39■■□□□ 1.81
CACFD1-204ENST00000474734 ORAI2Q96SN7 254 aa26.38■■□□□ 1.81
CACFD1-204ENST00000474734 C14orf93Q9H972 538 aaKnown RBP26.36■■□□□ 1.81
CACFD1-204ENST00000474734 CDK12Q9NYV4 1490 aaPredicted RBP26.36■■□□□ 1.81
CACFD1-204ENST00000474734 ADAMTS2O95450 1211 aa26.35■■□□□ 1.81
CACFD1-204ENST00000474734 QTRT2Q9H974 415 aaKnown RBP26.35■■□□□ 1.81
CACFD1-204ENST00000474734 NBPF8Q3BBV2 869 aa26.34■■□□□ 1.81
CACFD1-204ENST00000474734 NGLY1Q96IV0 654 aa26.34■■□□□ 1.81
CACFD1-204ENST00000474734 TRPM1Q7Z4N2 1603 aa26.33■■□□□ 1.81
CACFD1-204ENST00000474734 RALGAPBQ86X10 1494 aa26.32■■□□□ 1.8
CACFD1-204ENST00000474734 SOS2Q07890 1332 aaPredicted RBP26.32■■□□□ 1.8
CACFD1-204ENST00000474734 RBM6P78332 1123 aaKnown RBP26.31■■□□□ 1.8
CACFD1-204ENST00000474734 CFAP70Q5T0N1 1121 aa26.31■■□□□ 1.8
CACFD1-204ENST00000474734 TMEM132EQ6IEE7 984 aa26.31■■□□□ 1.8
CACFD1-204ENST00000474734 STK26Q9P289 416 aa26.3■■□□□ 1.8
CACFD1-204ENST00000474734 WAPLQ7Z5K2 1190 aa26.29■■□□□ 1.8
CACFD1-204ENST00000474734 LRPPRCP42704 1394 aaKnown RBP26.29■■□□□ 1.8
CACFD1-204ENST00000474734 ROCK2O75116 1388 aaKnown RBP26.28■■□□□ 1.8
CACFD1-204ENST00000474734 PLEKHH1Q9ULM0 1364 aa26.28■■□□□ 1.8
CACFD1-204ENST00000474734 TECPR2O15040 1411 aa26.28■■□□□ 1.8
CACFD1-204ENST00000474734 ESCO1Q5FWF5 840 aa26.26■■□□□ 1.79
CACFD1-204ENST00000474734 ADGRB1O14514 1584 aa26.25■■□□□ 1.79
CACFD1-204ENST00000474734 RGS12O14924 1447 aa26.25■■□□□ 1.79
CACFD1-204ENST00000474734 GPRASP1Q5JY77 1395 aa26.25■■□□□ 1.79
CACFD1-204ENST00000474734 ABCC11Q96J66 1382 aa26.25■■□□□ 1.79
CACFD1-204ENST00000474734 USP21Q9UK80 565 aa26.23■■□□□ 1.79
CACFD1-204ENST00000474734 NPHP3Q7Z494 1330 aa26.22■■□□□ 1.79
CACFD1-204ENST00000474734 NBPF1Q3BBV0 1214 aa26.22■■□□□ 1.79
CACFD1-204ENST00000474734 CDC42BPGQ6DT37 1551 aa26.21■■□□□ 1.79
CACFD1-204ENST00000474734 YTHDC2Q9H6S0 1430 aaKnown RBP26.21■■□□□ 1.79
CACFD1-204ENST00000474734 NUTM2FA1L443 756 aa26.19■■□□□ 1.78
CACFD1-204ENST00000474734 FOXO3O43524 673 aa26.19■■□□□ 1.78
CACFD1-204ENST00000474734 CARD11Q9BXL7 1154 aa26.19■■□□□ 1.78
CACFD1-204ENST00000474734 XPCQ01831 940 aaPredicted RBP26.18■■□□□ 1.78
CACFD1-204ENST00000474734 TRPC5Q9UL62 973 aaPredicted RBP26.18■■□□□ 1.78
CACFD1-204ENST00000474734 FNBP4Q8N3X1 1017 aaPredicted RBP26.17■■□□□ 1.78
CACFD1-204ENST00000474734 COL22A1Q8NFW1 1626 aaPredicted RBP26.16■■□□□ 1.78
CACFD1-204ENST00000474734 KNDC1Q76NI1 1749 aa26.16■■□□□ 1.78
CACFD1-204ENST00000474734 PXDNQ92626 1479 aa26.15■■□□□ 1.78
CACFD1-204ENST00000474734 DLC1Q96QB1 1528 aa26.14■■□□□ 1.77
CACFD1-204ENST00000474734 EIF3AQ14152 1382 aaKnown RBP26.13■■□□□ 1.77
CACFD1-204ENST00000474734 SIRT1Q96EB6 747 aa26.12■■□□□ 1.77
CACFD1-204ENST00000474734 ATAD2Q6PL18 1390 aa26.1■■□□□ 1.77
CACFD1-204ENST00000474734 ATRNO75882 1429 aa26.09■■□□□ 1.77
CACFD1-204ENST00000474734 TRAK1Q9UPV9 953 aa26.09■■□□□ 1.77
CACFD1-204ENST00000474734 USP47Q96K76 1375 aa26.07■■□□□ 1.76
CACFD1-204ENST00000474734 PRAM1Q96QH2 718 aa26.07■■□□□ 1.76
CACFD1-204ENST00000474734 ARHGEF28Q8N1W1 1705 aaKnown RBP26.07■■□□□ 1.76
CACFD1-204ENST00000474734 SAFB2Q14151 953 aaKnown RBP eCLIP26.06■■□□□ 1.76
CACFD1-204ENST00000474734 FMN2Q9NZ56 1722 aa26.05■■□□□ 1.76
CACFD1-204ENST00000474734 BCL9LQ86UU0 1499 aa26.04■■□□□ 1.76
CACFD1-204ENST00000474734 EIF4G2P78344 907 aaKnown RBP eCLIP26.04■■□□□ 1.76
CACFD1-204ENST00000474734 MARF1Q9Y4F3 1742 aaKnown RBP26.03■■□□□ 1.76
CACFD1-204ENST00000474734 SPATA31A3Q5VYP0 1347 aa26.03■■□□□ 1.76
CACFD1-204ENST00000474734 KRT28Q7Z3Y7 464 aa26.02■■□□□ 1.76
CACFD1-204ENST00000474734 POGKQ9P215 609 aa26.02■■□□□ 1.76
CACFD1-204ENST00000474734 GJD4Q96KN9 370 aaPredicted RBP26.01■■□□□ 1.75
CACFD1-204ENST00000474734 CENPJQ9HC77 1338 aaPredicted RBP26.01■■□□□ 1.75
CACFD1-204ENST00000474734 KIF1AQ12756 1690 aa26■■□□□ 1.75
CACFD1-204ENST00000474734 PHF8Q9UPP1 1060 aa25.99■■□□□ 1.75
CACFD1-204ENST00000474734 SLC24A1O60721 1099 aa25.97■■□□□ 1.75
CACFD1-204ENST00000474734 HAP1P54257 671 aaPredicted RBP25.97■■□□□ 1.75
CACFD1-204ENST00000474734 PSME1Q06323 249 aa25.97■■□□□ 1.75
CACFD1-204ENST00000474734 UNC5CLQ8IV45 518 aa25.97■■□□□ 1.75
CACFD1-204ENST00000474734 SBNO2Q9Y2G9 1366 aa25.95■■□□□ 1.75
CACFD1-204ENST00000474734 ST20-MTHFSA0A0A6YYL1 179 aa25.95■■□□□ 1.74
CACFD1-204ENST00000474734 PLEKHG5O94827 1062 aa25.95■■□□□ 1.74
CACFD1-204ENST00000474734 QRICH2Q9H0J4 1663 aa25.95■■□□□ 1.74
CACFD1-204ENST00000474734 RGPD8O14715 1765 aaPredicted RBP25.95■■□□□ 1.74
CACFD1-204ENST00000474734 HSPA5P11021 654 aaKnown RBP25.94■■□□□ 1.74
CACFD1-204ENST00000474734 HIRIP3Q9BW71 556 aaPredicted RBP25.94■■□□□ 1.74
CACFD1-204ENST00000474734 EP400Q96L91 3159 aa25.94■■□□□ 1.74
CACFD1-204ENST00000474734 TNS3Q68CZ2 1445 aa25.92■■□□□ 1.74
CACFD1-204ENST00000474734 LMOD2Q6P5Q4 547 aa25.92■■□□□ 1.74
CACFD1-204ENST00000474734 CCDC125Q86Z20 511 aa25.92■■□□□ 1.74
CACFD1-204ENST00000474734 CABLES1Q8TDN4 633 aa25.92■■□□□ 1.74
CACFD1-204ENST00000474734 SLIT2O94813 1529 aa25.92■■□□□ 1.74
CACFD1-204ENST00000474734 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.91■■□□□ 1.74
CACFD1-204ENST00000474734 MINK1Q8N4C8 1332 aaPredicted RBP25.9■■□□□ 1.74
CACFD1-204ENST00000474734 PRR36Q9H6K5 1346 aa25.9■■□□□ 1.74
CACFD1-204ENST00000474734 USP32Q8NFA0 1604 aa25.9■■□□□ 1.74
CACFD1-204ENST00000474734 ADGRB2O60241 1585 aa25.9■■□□□ 1.74
CACFD1-204ENST00000474734 PMFBP1Q8TBY8 1022 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms