RNA–Protein interactions for RNA: ENST00000474725.5

EDEM3-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 2

Gene EDEM3, Length 1,911 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-206ENST00000474725 HSPA2P54652 639 aa27.92■■■□□ 2.06
EDEM3-206ENST00000474725 PANK3Q9H999 370 aa27.92■■■□□ 2.06
EDEM3-206ENST00000474725 PIK3R4Q99570 1358 aa27.91■■■□□ 2.06
EDEM3-206ENST00000474725 MYOM1P52179 1685 aa27.91■■■□□ 2.06
EDEM3-206ENST00000474725 PUS7Q96PZ0 661 aaKnown RBP27.9■■■□□ 2.06
EDEM3-206ENST00000474725 CABP2Q9NPB3 220 aa27.9■■■□□ 2.06
EDEM3-206ENST00000474725 LMTK3Q96Q04 1460 aa27.89■■■□□ 2.05
EDEM3-206ENST00000474725 XRN1Q8IZH2 1706 aaKnown RBP27.87■■■□□ 2.05
EDEM3-206ENST00000474725 SRPK2P78362 688 aaKnown RBP27.86■■■□□ 2.05
EDEM3-206ENST00000474725 CDK19Q9BWU1 502 aa27.86■■■□□ 2.05
EDEM3-206ENST00000474725 PER1O15534 1290 aaPredicted RBP27.85■■■□□ 2.05
EDEM3-206ENST00000474725 PTCH1Q13635 1447 aa27.85■■■□□ 2.05
EDEM3-206ENST00000474725 KCNA6P17658 529 aa27.84■■■□□ 2.05
EDEM3-206ENST00000474725 CHD2O14647 1828 aaKnown RBP27.83■■■□□ 2.05
EDEM3-206ENST00000474725 TMC1Q8TDI8 760 aa27.82■■■□□ 2.04
EDEM3-206ENST00000474725 PRKRIP1Q9H875 184 aaPredicted RBP27.82■■■□□ 2.04
EDEM3-206ENST00000474725 CNGB1Q14028 1251 aaPredicted RBP27.81■■■□□ 2.04
EDEM3-206ENST00000474725 SLC12A5Q9H2X9 1139 aa27.81■■■□□ 2.04
EDEM3-206ENST00000474725 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.81■■■□□ 2.04
EDEM3-206ENST00000474725 WASLO00401 505 aaPredicted RBP27.8■■■□□ 2.04
EDEM3-206ENST00000474725 ATAD2Q6PL18 1390 aa27.78■■■□□ 2.04
EDEM3-206ENST00000474725 ADGRB2O60241 1585 aa27.74■■■□□ 2.03
EDEM3-206ENST00000474725 CCER2I3L3R5 266 aa27.74■■■□□ 2.03
EDEM3-206ENST00000474725 KNSTRNQ9Y448 316 aa27.74■■■□□ 2.03
EDEM3-206ENST00000474725 CARD14Q9BXL6 1004 aa27.73■■■□□ 2.03
EDEM3-206ENST00000474725 NINLQ9Y2I6 1382 aa27.72■■■□□ 2.03
EDEM3-206ENST00000474725 STRCQ7RTU9 1775 aa27.71■■■□□ 2.03
EDEM3-206ENST00000474725 NWD1Q149M9 1564 aa27.69■■■□□ 2.02
EDEM3-206ENST00000474725 KTN1Q86UP2 1357 aaKnown RBP27.69■■■□□ 2.02
EDEM3-206ENST00000474725 CC2D1BQ5T0F9 858 aaKnown RBP27.69■■■□□ 2.02
EDEM3-206ENST00000474725 NUDT16Q96DE0 195 aaKnown RBP27.69■■■□□ 2.02
EDEM3-206ENST00000474725 CABP1Q9NZU7 370 aa27.69■■■□□ 2.02
EDEM3-206ENST00000474725 ANKRD36BQ8N2N9 1353 aa27.68■■■□□ 2.02
EDEM3-206ENST00000474725 AMER1Q5JTC6 1135 aaPredicted RBP27.67■■■□□ 2.02
EDEM3-206ENST00000474725 RBM33Q96EV2 1170 aaKnown RBP27.67■■■□□ 2.02
EDEM3-206ENST00000474725 PRR36Q9H6K5 1346 aa27.65■■■□□ 2.02
EDEM3-206ENST00000474725 RALBP1Q15311 655 aa27.65■■■□□ 2.02
EDEM3-206ENST00000474725 NSD3Q9BZ95 1437 aa27.65■■■□□ 2.02
EDEM3-206ENST00000474725 CD163L1Q9NR16 1453 aa27.64■■■□□ 2.01
EDEM3-206ENST00000474725 A0A1W2PP64 1363 aa27.63■■■□□ 2.01
EDEM3-206ENST00000474725 PARD3Q8TEW0 1356 aa27.63■■■□□ 2.01
EDEM3-206ENST00000474725 ATP7BP35670 1465 aa27.63■■■□□ 2.01
EDEM3-206ENST00000474725 TERF2IPQ9NYB0 399 aa27.63■■■□□ 2.01
EDEM3-206ENST00000474725 CCDC61Q9Y6R9 512 aa27.63■■■□□ 2.01
EDEM3-206ENST00000474725 PPIP5K1Q6PFW1 1433 aa27.62■■■□□ 2.01
EDEM3-206ENST00000474725 NUTM2FA1L443 756 aa27.62■■■□□ 2.01
EDEM3-206ENST00000474725 NPC1L1Q9UHC9 1359 aa27.61■■■□□ 2.01
EDEM3-206ENST00000474725 CCDC184Q52MB2 194 aa27.61■■■□□ 2.01
EDEM3-206ENST00000474725 HDGFL2Q7Z4V5 671 aaPredicted RBP27.6■■■□□ 2.01
EDEM3-206ENST00000474725 PROSER2Q86WR7 435 aaPredicted RBP27.6■■■□□ 2.01
EDEM3-206ENST00000474725 NALCNQ8IZF0 1738 aa27.6■■■□□ 2.01
EDEM3-206ENST00000474725 NKTRP30414 1462 aaKnown RBP27.58■■■□□ 2.01
EDEM3-206ENST00000474725 STRCP1A6NGW2 1772 aa27.58■■■□□ 2
EDEM3-206ENST00000474725 MYBBP1AQ9BQG0 1328 aaKnown RBP27.57■■■□□ 2
EDEM3-206ENST00000474725 ADGRL3Q9HAR2 1447 aa27.56■■■□□ 2
EDEM3-206ENST00000474725 USP32Q8NFA0 1604 aa27.56■■■□□ 2
EDEM3-206ENST00000474725 TOPAZ1Q8N9V7 1692 aa27.54■■■□□ 2
EDEM3-206ENST00000474725 C14orf37Q86TY3 774 aa27.54■■■□□ 2
EDEM3-206ENST00000474725 YTHDC1Q96MU7 727 aaKnown RBP27.54■■■□□ 2
EDEM3-206ENST00000474725 MRS2Q9HD23 443 aa27.53■■■□□ 2
EDEM3-206ENST00000474725 CGNL1Q0VF96 1302 aa27.53■■■□□ 2
EDEM3-206ENST00000474725 CPSF1Q10570 1443 aaKnown RBP27.53■■■□□ 2
EDEM3-206ENST00000474725 CDC42BPGQ6DT37 1551 aa27.53■■■□□ 2
EDEM3-206ENST00000474725 FMN2Q9NZ56 1722 aa27.53■■■□□ 2
EDEM3-206ENST00000474725 CENPBP07199 599 aaPredicted RBP27.52■■■□□ 2
EDEM3-206ENST00000474725 PLEKHG3A1L390 1219 aa27.51■■■□□ 2
EDEM3-206ENST00000474725 ANKARQ7Z5J8 1434 aa27.5■■□□□ 1.99
EDEM3-206ENST00000474725 RGPD8O14715 1765 aaPredicted RBP27.49■■□□□ 1.99
EDEM3-206ENST00000474725 TMEM94Q12767 1356 aa27.48■■□□□ 1.99
EDEM3-206ENST00000474725 NLRP13Q86W25 1043 aa27.47■■□□□ 1.99
EDEM3-206ENST00000474725 ACEP12821 1306 aa27.47■■□□□ 1.99
EDEM3-206ENST00000474725 DMRT2Q9Y5R5 561 aa27.47■■□□□ 1.99
EDEM3-206ENST00000474725 ITSN1Q15811 1721 aa27.46■■□□□ 1.99
EDEM3-206ENST00000474725 AKAP12Q02952 1782 aa27.46■■□□□ 1.99
EDEM3-206ENST00000474725 ZNF692Q9BU19 519 aaPredicted RBP27.46■■□□□ 1.99
EDEM3-206ENST00000474725 ZNF335Q9H4Z2 1342 aaPredicted RBP27.46■■□□□ 1.99
EDEM3-206ENST00000474725 PPP2R1AP30153 589 aa27.45■■□□□ 1.99
EDEM3-206ENST00000474725 PMFBP1Q8TBY8 1022 aa27.45■■□□□ 1.99
EDEM3-206ENST00000474725 BRD4O60885 1362 aaPredicted RBP27.45■■□□□ 1.99
EDEM3-206ENST00000474725 MORC1Q86VD1 984 aa27.45■■□□□ 1.98
EDEM3-206ENST00000474725 NSD2O96028 1365 aa27.45■■□□□ 1.98
EDEM3-206ENST00000474725 FYB1O15117 783 aa27.44■■□□□ 1.98
EDEM3-206ENST00000474725 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.44■■□□□ 1.98
EDEM3-206ENST00000474725 C19orf44Q9H6X5 657 aa27.44■■□□□ 1.98
EDEM3-206ENST00000474725 EDC4Q6P2E9 1401 aaKnown RBP27.44■■□□□ 1.98
EDEM3-206ENST00000474725 MON2Q7Z3U7 1717 aa27.43■■□□□ 1.98
EDEM3-206ENST00000474725 NCOA3Q9Y6Q9 1424 aa27.43■■□□□ 1.98
EDEM3-206ENST00000474725 GGNBP2Q9H3C7 697 aa27.42■■□□□ 1.98
EDEM3-206ENST00000474725 NGDNQ8NEJ9 315 aaKnown RBP27.4■■□□□ 1.98
EDEM3-206ENST00000474725 POLR3AO14802 1390 aaPredicted RBP27.39■■□□□ 1.98
EDEM3-206ENST00000474725 FAM9BQ8IZU0 186 aa27.38■■□□□ 1.97
EDEM3-206ENST00000474725 KIF20BQ96Q89 1820 aa27.38■■□□□ 1.97
EDEM3-206ENST00000474725 TNNT2P45379 298 aaPredicted RBP27.37■■□□□ 1.97
EDEM3-206ENST00000474725 USP6P35125 1406 aa27.37■■□□□ 1.97
EDEM3-206ENST00000474725 LRRC7Q96NW7 1537 aa27.37■■□□□ 1.97
EDEM3-206ENST00000474725 PHF8Q9UPP1 1060 aa27.36■■□□□ 1.97
EDEM3-206ENST00000474725 ESCO1Q5FWF5 840 aa27.35■■□□□ 1.97
EDEM3-206ENST00000474725 PNISRQ8TF01 805 aaKnown RBP27.35■■□□□ 1.97
EDEM3-206ENST00000474725 XIRP1Q702N8 1843 aaKnown RBP27.35■■□□□ 1.97
EDEM3-206ENST00000474725 TTC21BQ7Z4L5 1316 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms