RNA–Protein interactions for RNA: ENST00000474691.1

EPCAM-205, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 714 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-205ENST00000474691 RGS12O14924 1447 aa20.61■□□□□ 0.89
EPCAM-205ENST00000474691 LRPPRCP42704 1394 aaKnown RBP20.6■□□□□ 0.89
EPCAM-205ENST00000474691 ATAD2Q6PL18 1390 aa20.59■□□□□ 0.89
EPCAM-205ENST00000474691 CCDC144AA2RUR9 1427 aa20.59■□□□□ 0.89
EPCAM-205ENST00000474691 NUTM2FA1L443 756 aa20.58■□□□□ 0.89
EPCAM-205ENST00000474691 FOXO3O43524 673 aa20.57■□□□□ 0.88
EPCAM-205ENST00000474691 XPCQ01831 940 aaPredicted RBP20.56■□□□□ 0.88
EPCAM-205ENST00000474691 HAP1P54257 671 aaPredicted RBP20.55■□□□□ 0.88
EPCAM-205ENST00000474691 FNBP4Q8N3X1 1017 aaPredicted RBP20.55■□□□□ 0.88
EPCAM-205ENST00000474691 ADGRF5Q8IZF2 1346 aa20.53■□□□□ 0.88
EPCAM-205ENST00000474691 WAPLQ7Z5K2 1190 aa20.53■□□□□ 0.88
EPCAM-205ENST00000474691 ANKRD30BQ9BXX2 1392 aa20.53■□□□□ 0.88
EPCAM-205ENST00000474691 PRAG1Q86YV5 1406 aa20.53■□□□□ 0.88
EPCAM-205ENST00000474691 MPHOSPH9Q99550 1183 aa20.51■□□□□ 0.87
EPCAM-205ENST00000474691 PPLO60437 1756 aa20.51■□□□□ 0.87
EPCAM-205ENST00000474691 LAMC1P11047 1609 aa20.5■□□□□ 0.87
EPCAM-205ENST00000474691 TMEM132EQ6IEE7 984 aa20.5■□□□□ 0.87
EPCAM-205ENST00000474691 ZRANB1Q9UGI0 708 aa20.5■□□□□ 0.87
EPCAM-205ENST00000474691 CDC42BPGQ6DT37 1551 aa20.49■□□□□ 0.87
EPCAM-205ENST00000474691 CCDC125Q86Z20 511 aa20.48■□□□□ 0.87
EPCAM-205ENST00000474691 ATRNO75882 1429 aa20.47■□□□□ 0.87
EPCAM-205ENST00000474691 PSME1Q06323 249 aa20.47■□□□□ 0.87
EPCAM-205ENST00000474691 GJD4Q96KN9 370 aaPredicted RBP20.47■□□□□ 0.87
EPCAM-205ENST00000474691 ACIN1Q9UKV3 1341 aaKnown RBP20.47■□□□□ 0.87
EPCAM-205ENST00000474691 ABCC11Q96J66 1382 aa20.46■□□□□ 0.87
EPCAM-205ENST00000474691 PLEKHG5O94827 1062 aa20.45■□□□□ 0.86
EPCAM-205ENST00000474691 LMOD2Q6P5Q4 547 aa20.45■□□□□ 0.86
EPCAM-205ENST00000474691 KRT28Q7Z3Y7 464 aa20.45■□□□□ 0.86
EPCAM-205ENST00000474691 MYOM2P54296 1465 aa20.44■□□□□ 0.86
EPCAM-205ENST00000474691 COL22A1Q8NFW1 1626 aaPredicted RBP20.44■□□□□ 0.86
EPCAM-205ENST00000474691 PXDNQ92626 1479 aa20.43■□□□□ 0.86
EPCAM-205ENST00000474691 SF3B2Q13435 895 aaKnown RBP20.43■□□□□ 0.86
EPCAM-205ENST00000474691 UNC5CLQ8IV45 518 aa20.43■□□□□ 0.86
EPCAM-205ENST00000474691 CCDC9Q9Y3X0 531 aaKnown RBP20.43■□□□□ 0.86
EPCAM-205ENST00000474691 DHX57Q6P158 1386 aaKnown RBP20.43■□□□□ 0.86
EPCAM-205ENST00000474691 TECPR2O15040 1411 aa20.43■□□□□ 0.86
EPCAM-205ENST00000474691 SPATA31A3Q5VYP0 1347 aa20.42■□□□□ 0.86
EPCAM-205ENST00000474691 PLEKHH1Q9ULM0 1364 aa20.42■□□□□ 0.86
EPCAM-205ENST00000474691 YTHDC2Q9H6S0 1430 aaKnown RBP20.42■□□□□ 0.86
EPCAM-205ENST00000474691 POGKQ9P215 609 aa20.41■□□□□ 0.86
EPCAM-205ENST00000474691 PHF8Q9UPP1 1060 aa20.41■□□□□ 0.86
EPCAM-205ENST00000474691 SAFB2Q14151 953 aaKnown RBP eCLIP20.4■□□□□ 0.86
EPCAM-205ENST00000474691 SPATA31E1Q6ZUB1 1445 aa20.4■□□□□ 0.86
EPCAM-205ENST00000474691 BCL9LQ86UU0 1499 aa20.4■□□□□ 0.86
EPCAM-205ENST00000474691 SIRT1Q96EB6 747 aa20.4■□□□□ 0.86
EPCAM-205ENST00000474691 PIK3C2GO75747 1445 aa20.39■□□□□ 0.85
EPCAM-205ENST00000474691 A0A0G2JS52 829 aa20.38■□□□□ 0.85
EPCAM-205ENST00000474691 MYT1Q01538 1121 aa20.38■□□□□ 0.85
EPCAM-205ENST00000474691 C14orf93Q9H972 538 aaKnown RBP20.38■□□□□ 0.85
EPCAM-205ENST00000474691 CFAP70Q5T0N1 1121 aa20.36■□□□□ 0.85
EPCAM-205ENST00000474691 PRAM1Q96QH2 718 aa20.36■□□□□ 0.85
EPCAM-205ENST00000474691 KIF1AQ12756 1690 aa20.35■□□□□ 0.85
EPCAM-205ENST00000474691 KNDC1Q76NI1 1749 aa20.34■□□□□ 0.85
EPCAM-205ENST00000474691 CABLES1Q8TDN4 633 aa20.33■□□□□ 0.85
EPCAM-205ENST00000474691 TNS3Q68CZ2 1445 aa20.33■□□□□ 0.84
EPCAM-205ENST00000474691 MARF1Q9Y4F3 1742 aaKnown RBP20.33■□□□□ 0.84
EPCAM-205ENST00000474691 ARHGEF10O15013 1369 aa20.33■□□□□ 0.84
EPCAM-205ENST00000474691 RALGAPBQ86X10 1494 aa20.32■□□□□ 0.84
EPCAM-205ENST00000474691 MSH5O43196 834 aa20.32■□□□□ 0.84
EPCAM-205ENST00000474691 SEPT12Q8IYM1 358 aa20.32■□□□□ 0.84
EPCAM-205ENST00000474691 PMFBP1Q8TBY8 1022 aa20.32■□□□□ 0.84
EPCAM-205ENST00000474691 FMN2Q9NZ56 1722 aa20.32■□□□□ 0.84
EPCAM-205ENST00000474691 VPS72Q15906 364 aa20.31■□□□□ 0.84
EPCAM-205ENST00000474691 SLIT2O94813 1529 aa20.31■□□□□ 0.84
EPCAM-205ENST00000474691 IFT172Q9UG01 1749 aa20.3■□□□□ 0.84
EPCAM-205ENST00000474691 BLMP54132 1417 aaPredicted RBP20.3■□□□□ 0.84
EPCAM-205ENST00000474691 SBNO1A3KN83 1393 aa20.29■□□□□ 0.84
EPCAM-205ENST00000474691 KRT27Q7Z3Y8 459 aa20.28■□□□□ 0.84
EPCAM-205ENST00000474691 TRAK1Q9UPV9 953 aa20.28■□□□□ 0.84
EPCAM-205ENST00000474691 KDM2AQ9Y2K7 1162 aa20.28■□□□□ 0.84
EPCAM-205ENST00000474691 GPRASP1Q5JY77 1395 aa20.28■□□□□ 0.84
EPCAM-205ENST00000474691 USP32Q8NFA0 1604 aa20.27■□□□□ 0.84
EPCAM-205ENST00000474691 EIF3AQ14152 1382 aaKnown RBP20.27■□□□□ 0.84
EPCAM-205ENST00000474691 PIAS4Q8N2W9 510 aaPredicted RBP20.27■□□□□ 0.84
EPCAM-205ENST00000474691 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.27■□□□□ 0.83
EPCAM-205ENST00000474691 HIRIP3Q9BW71 556 aaPredicted RBP20.26■□□□□ 0.83
EPCAM-205ENST00000474691 NRXN1Q9ULB1 1477 aa20.25■□□□□ 0.83
EPCAM-205ENST00000474691 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
EPCAM-205ENST00000474691 DEFB132Q7Z7B7 95 aa20.24■□□□□ 0.83
EPCAM-205ENST00000474691 NGDNQ8NEJ9 315 aaKnown RBP20.24■□□□□ 0.83
EPCAM-205ENST00000474691 ANKARQ7Z5J8 1434 aa20.24■□□□□ 0.83
EPCAM-205ENST00000474691 MINK1Q8N4C8 1332 aaPredicted RBP20.24■□□□□ 0.83
EPCAM-205ENST00000474691 GLI3P10071 1580 aa20.23■□□□□ 0.83
EPCAM-205ENST00000474691 BAG6P46379 1132 aa20.23■□□□□ 0.83
EPCAM-205ENST00000474691 DCAF11Q8TEB1 546 aa20.23■□□□□ 0.83
EPCAM-205ENST00000474691 FAM83GA6ND36 823 aa20.22■□□□□ 0.83
EPCAM-205ENST00000474691 BTG4Q9NY30 223 aa20.22■□□□□ 0.83
EPCAM-205ENST00000474691 ADRA2BP18089 450 aa20.2■□□□□ 0.82
EPCAM-205ENST00000474691 FAM98CQ17RN3 349 aaKnown RBP20.2■□□□□ 0.82
EPCAM-205ENST00000474691 DLC1Q96QB1 1528 aa20.2■□□□□ 0.82
EPCAM-205ENST00000474691 RGPD8O14715 1765 aaPredicted RBP20.2■□□□□ 0.82
EPCAM-205ENST00000474691 ONECUT3O60422 494 aaPredicted RBP20.19■□□□□ 0.82
EPCAM-205ENST00000474691 STAC3Q96MF2 364 aa20.19■□□□□ 0.82
EPCAM-205ENST00000474691 RAB3GAP2Q9H2M9 1393 aa20.19■□□□□ 0.82
EPCAM-205ENST00000474691 WASLO00401 505 aaPredicted RBP20.18■□□□□ 0.82
EPCAM-205ENST00000474691 PRDM11Q9NQV5 511 aa20.17■□□□□ 0.82
EPCAM-205ENST00000474691 PLCH1Q4KWH8 1693 aa20.16■□□□□ 0.82
EPCAM-205ENST00000474691 NWD2Q9ULI1 1742 aa20.16■□□□□ 0.82
EPCAM-205ENST00000474691 BRWD3Q6RI45 1802 aa20.13■□□□□ 0.81
EPCAM-205ENST00000474691 ADGRB2O60241 1585 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms