RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ROBO2Q9HCK4 1378 aa14.12□□□□□ -0.15
COL8A1-206ENST00000474648 HIRIP3Q9BW71 556 aaPredicted RBP14.12□□□□□ -0.15
COL8A1-206ENST00000474648 TECPR2O15040 1411 aa14.12□□□□□ -0.15
COL8A1-206ENST00000474648 DSG3P32926 999 aa14.11□□□□□ -0.15
COL8A1-206ENST00000474648 PRAM1Q96QH2 718 aa14.11□□□□□ -0.15
COL8A1-206ENST00000474648 TESK2Q96S53 571 aa14.11□□□□□ -0.15
COL8A1-206ENST00000474648 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
COL8A1-206ENST00000474648 PLEKHH1Q9ULM0 1364 aa14.1□□□□□ -0.15
COL8A1-206ENST00000474648 ZNF335Q9H4Z2 1342 aaPredicted RBP14.1□□□□□ -0.15
COL8A1-206ENST00000474648 POGKQ9P215 609 aa14.09□□□□□ -0.15
COL8A1-206ENST00000474648 DLC1Q96QB1 1528 aa14.09□□□□□ -0.15
COL8A1-206ENST00000474648 CENPJQ9HC77 1338 aaPredicted RBP14.09□□□□□ -0.15
COL8A1-206ENST00000474648 FAM135BQ49AJ0 1406 aa14.08□□□□□ -0.15
COL8A1-206ENST00000474648 SAFB2Q14151 953 aaKnown RBP eCLIP14.07□□□□□ -0.16
COL8A1-206ENST00000474648 EIF3AQ14152 1382 aaKnown RBP14.07□□□□□ -0.16
COL8A1-206ENST00000474648 PTCH1Q13635 1447 aa14.07□□□□□ -0.16
COL8A1-206ENST00000474648 C11orf95C9JLR9 678 aaPredicted RBP14.06□□□□□ -0.16
COL8A1-206ENST00000474648 PROSER2Q86WR7 435 aaPredicted RBP14.06□□□□□ -0.16
COL8A1-206ENST00000474648 RBM33Q96EV2 1170 aaKnown RBP14.06□□□□□ -0.16
COL8A1-206ENST00000474648 XRN1Q8IZH2 1706 aaKnown RBP14.06□□□□□ -0.16
COL8A1-206ENST00000474648 CHD2O14647 1828 aaKnown RBP14.06□□□□□ -0.16
COL8A1-206ENST00000474648 CPS1P31327 1500 aa14.05□□□□□ -0.16
COL8A1-206ENST00000474648 NWD1Q149M9 1564 aa14.05□□□□□ -0.16
COL8A1-206ENST00000474648 MINK1Q8N4C8 1332 aaPredicted RBP14.03□□□□□ -0.16
COL8A1-206ENST00000474648 SBNO2Q9Y2G9 1366 aa14.03□□□□□ -0.16
COL8A1-206ENST00000474648 KNDC1Q76NI1 1749 aa14.02□□□□□ -0.16
COL8A1-206ENST00000474648 ZNF316A6NFI3 1004 aaPredicted RBP14.02□□□□□ -0.17
COL8A1-206ENST00000474648 ABCB7O75027 752 aa14.02□□□□□ -0.17
COL8A1-206ENST00000474648 STRCP1A6NGW2 1772 aa14.01□□□□□ -0.17
COL8A1-206ENST00000474648 ARHGEF28Q8N1W1 1705 aaKnown RBP14.01□□□□□ -0.17
COL8A1-206ENST00000474648 NKTRP30414 1462 aaKnown RBP14.01□□□□□ -0.17
COL8A1-206ENST00000474648 TMEM94Q12767 1356 aa14.01□□□□□ -0.17
COL8A1-206ENST00000474648 SLC24A1O60721 1099 aa14.01□□□□□ -0.17
COL8A1-206ENST00000474648 WASLO00401 505 aaPredicted RBP14□□□□□ -0.17
COL8A1-206ENST00000474648 ATXN8OSP0DMR3 200 aa14□□□□□ -0.17
COL8A1-206ENST00000474648 TMF1P82094 1093 aa14□□□□□ -0.17
COL8A1-206ENST00000474648 CDK19Q9BWU1 502 aa14□□□□□ -0.17
COL8A1-206ENST00000474648 LRRC7Q96NW7 1537 aa14□□□□□ -0.17
COL8A1-206ENST00000474648 NCOA3Q9Y6Q9 1424 aa13.99□□□□□ -0.17
COL8A1-206ENST00000474648 DISP3Q9P2K9 1392 aa13.99□□□□□ -0.17
COL8A1-206ENST00000474648 LTBP4Q8N2S1 1624 aa13.98□□□□□ -0.17
COL8A1-206ENST00000474648 EVC2Q86UK5 1308 aa13.98□□□□□ -0.17
COL8A1-206ENST00000474648 PUS7Q96PZ0 661 aaKnown RBP13.98□□□□□ -0.17
COL8A1-206ENST00000474648 C19orf44Q9H6X5 657 aa13.98□□□□□ -0.17
COL8A1-206ENST00000474648 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.98□□□□□ -0.17
COL8A1-206ENST00000474648 KIF7Q2M1P5 1343 aa13.97□□□□□ -0.17
COL8A1-206ENST00000474648 WASHC2AQ641Q2 1341 aa13.97□□□□□ -0.17
COL8A1-206ENST00000474648 CABP2Q9NPB3 220 aa13.97□□□□□ -0.17
COL8A1-206ENST00000474648 ADGRL3Q9HAR2 1447 aa13.96□□□□□ -0.18
COL8A1-206ENST00000474648 CCDC7Q96M83 1385 aa13.96□□□□□ -0.18
COL8A1-206ENST00000474648 TULP4Q9NRJ4 1543 aa13.95□□□□□ -0.18
COL8A1-206ENST00000474648 C14orf37Q86TY3 774 aa13.95□□□□□ -0.18
COL8A1-206ENST00000474648 PRR36Q9H6K5 1346 aa13.94□□□□□ -0.18
COL8A1-206ENST00000474648 SRPK2P78362 688 aaKnown RBP13.94□□□□□ -0.18
COL8A1-206ENST00000474648 CDCA8Q53HL2 280 aa13.94□□□□□ -0.18
COL8A1-206ENST00000474648 QRICH2Q9H0J4 1663 aa13.94□□□□□ -0.18
COL8A1-206ENST00000474648 NUDT16Q96DE0 195 aaKnown RBP13.93□□□□□ -0.18
COL8A1-206ENST00000474648 ADGRB2O60241 1585 aa13.92□□□□□ -0.18
COL8A1-206ENST00000474648 NUTM2FA1L443 756 aa13.92□□□□□ -0.18
COL8A1-206ENST00000474648 POLR3GLQ9BT43 218 aa13.91□□□□□ -0.18
COL8A1-206ENST00000474648 MSH6P52701 1360 aa13.91□□□□□ -0.18
COL8A1-206ENST00000474648 ATF3P18847 181 aa13.9□□□□□ -0.18
COL8A1-206ENST00000474648 CADPS2Q86UW7 1296 aa13.9□□□□□ -0.18
COL8A1-206ENST00000474648 SLC12A5Q9H2X9 1139 aa13.9□□□□□ -0.18
COL8A1-206ENST00000474648 CCDC61Q9Y6R9 512 aa13.9□□□□□ -0.18
COL8A1-206ENST00000474648 POLA2Q14181 598 aa13.89□□□□□ -0.19
COL8A1-206ENST00000474648 CABP1Q9NZU7 370 aa13.89□□□□□ -0.19
COL8A1-206ENST00000474648 DCCP43146 1447 aa13.89□□□□□ -0.19
COL8A1-206ENST00000474648 CDC42BPGQ6DT37 1551 aa13.88□□□□□ -0.19
COL8A1-206ENST00000474648 ATAD2Q6PL18 1390 aa13.88□□□□□ -0.19
COL8A1-206ENST00000474648 NALCNQ8IZF0 1738 aa13.88□□□□□ -0.19
COL8A1-206ENST00000474648 PLEKHG3A1L390 1219 aa13.88□□□□□ -0.19
COL8A1-206ENST00000474648 CERKQ8TCT0 537 aa13.88□□□□□ -0.19
COL8A1-206ENST00000474648 ANKARQ7Z5J8 1434 aa13.88□□□□□ -0.19
COL8A1-206ENST00000474648 XIRP1Q702N8 1843 aaKnown RBP13.87□□□□□ -0.19
COL8A1-206ENST00000474648 DDX10Q13206 875 aaKnown RBP13.87□□□□□ -0.19
COL8A1-206ENST00000474648 TMC1Q8TDI8 760 aa13.87□□□□□ -0.19
COL8A1-206ENST00000474648 ORAI2Q96SN7 254 aa13.87□□□□□ -0.19
COL8A1-206ENST00000474648 SLAIN2Q9P270 581 aa13.87□□□□□ -0.19
COL8A1-206ENST00000474648 MST1RQ04912 1400 aa13.87□□□□□ -0.19
COL8A1-206ENST00000474648 ATP7BP35670 1465 aa13.87□□□□□ -0.19
COL8A1-206ENST00000474648 C1orf167Q5SNV9 1468 aa13.87□□□□□ -0.19
COL8A1-206ENST00000474648 ESCO1Q5FWF5 840 aa13.85□□□□□ -0.19
COL8A1-206ENST00000474648 PANK3Q9H999 370 aa13.85□□□□□ -0.19
COL8A1-206ENST00000474648 PMFBP1Q8TBY8 1022 aa13.84□□□□□ -0.19
COL8A1-206ENST00000474648 CARD14Q9BXL6 1004 aa13.84□□□□□ -0.19
COL8A1-206ENST00000474648 PHF8Q9UPP1 1060 aa13.84□□□□□ -0.19
COL8A1-206ENST00000474648 USP32Q8NFA0 1604 aa13.83□□□□□ -0.2
COL8A1-206ENST00000474648 PPIP5K1Q6PFW1 1433 aa13.83□□□□□ -0.2
COL8A1-206ENST00000474648 PER1O15534 1290 aaPredicted RBP13.83□□□□□ -0.2
COL8A1-206ENST00000474648 FMN2Q9NZ56 1722 aa13.83□□□□□ -0.2
COL8A1-206ENST00000474648 ACEP12821 1306 aa13.83□□□□□ -0.2
COL8A1-206ENST00000474648 NINLQ9Y2I6 1382 aa13.83□□□□□ -0.2
COL8A1-206ENST00000474648 CD163L1Q9NR16 1453 aa13.82□□□□□ -0.2
COL8A1-206ENST00000474648 CPSF1Q10570 1443 aaKnown RBP13.81□□□□□ -0.2
COL8A1-206ENST00000474648 IQSEC2Q5JU85 1478 aa13.81□□□□□ -0.2
COL8A1-206ENST00000474648 BRINP3Q76B58 766 aa13.81□□□□□ -0.2
COL8A1-206ENST00000474648 POLR3AO14802 1390 aaPredicted RBP13.81□□□□□ -0.2
COL8A1-206ENST00000474648 ANKRD36BQ8N2N9 1353 aa13.81□□□□□ -0.2
COL8A1-206ENST00000474648 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms