RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 ASXL1Q8IXJ9 1541 aa5.9□□□□□ -1.47
GAPVD1-216ENST00000474637 FAM135BQ49AJ0 1406 aa5.9□□□□□ -1.47
GAPVD1-216ENST00000474637 C14orf37Q86TY3 774 aa5.89□□□□□ -1.47
GAPVD1-216ENST00000474637 C19orf44Q9H6X5 657 aa5.89□□□□□ -1.47
GAPVD1-216ENST00000474637 ADGRB1O14514 1584 aa5.89□□□□□ -1.47
GAPVD1-216ENST00000474637 ADGRL3Q9HAR2 1447 aa5.89□□□□□ -1.47
GAPVD1-216ENST00000474637 ATF3P18847 181 aa5.88□□□□□ -1.47
GAPVD1-216ENST00000474637 TMEM132EQ6IEE7 984 aa5.88□□□□□ -1.47
GAPVD1-216ENST00000474637 CADPS2Q86UW7 1296 aa5.88□□□□□ -1.47
GAPVD1-216ENST00000474637 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.88□□□□□ -1.47
GAPVD1-216ENST00000474637 ROBO2Q9HCK4 1378 aa5.88□□□□□ -1.47
GAPVD1-216ENST00000474637 TRPM1Q7Z4N2 1603 aa5.88□□□□□ -1.47
GAPVD1-216ENST00000474637 STK26Q9P289 416 aa5.87□□□□□ -1.47
GAPVD1-216ENST00000474637 NALCNQ8IZF0 1738 aa5.87□□□□□ -1.47
GAPVD1-216ENST00000474637 CDC42BPGQ6DT37 1551 aa5.87□□□□□ -1.47
GAPVD1-216ENST00000474637 POGKQ9P215 609 aa5.86□□□□□ -1.47
GAPVD1-216ENST00000474637 ARHGEF28Q8N1W1 1705 aaKnown RBP5.86□□□□□ -1.47
GAPVD1-216ENST00000474637 ROCK2O75116 1388 aaKnown RBP5.86□□□□□ -1.47
GAPVD1-216ENST00000474637 PIP4K2BP78356 416 aa5.86□□□□□ -1.47
GAPVD1-216ENST00000474637 ILDR1Q86SU0 546 aaPredicted RBP5.86□□□□□ -1.47
GAPVD1-216ENST00000474637 RBM33Q96EV2 1170 aaKnown RBP5.86□□□□□ -1.47
GAPVD1-216ENST00000474637 SLAIN2Q9P270 581 aa5.86□□□□□ -1.47
GAPVD1-216ENST00000474637 ADGRB2O60241 1585 aa5.85□□□□□ -1.47
GAPVD1-216ENST00000474637 RALGAPBQ86X10 1494 aa5.85□□□□□ -1.47
GAPVD1-216ENST00000474637 EIF3AQ14152 1382 aaKnown RBP5.85□□□□□ -1.47
GAPVD1-216ENST00000474637 GPRASP1Q5JY77 1395 aa5.85□□□□□ -1.47
GAPVD1-216ENST00000474637 PRAM1Q96QH2 718 aa5.85□□□□□ -1.47
GAPVD1-216ENST00000474637 TRAK1Q9UPV9 953 aa5.85□□□□□ -1.47
GAPVD1-216ENST00000474637 WAPLQ7Z5K2 1190 aa5.85□□□□□ -1.47
GAPVD1-216ENST00000474637 MST1RQ04912 1400 aa5.85□□□□□ -1.47
GAPVD1-216ENST00000474637 ROBO1Q9Y6N7 1651 aa5.85□□□□□ -1.47
GAPVD1-216ENST00000474637 PLEKHH1Q9ULM0 1364 aa5.84□□□□□ -1.47
GAPVD1-216ENST00000474637 NBPF1Q3BBV0 1214 aa5.84□□□□□ -1.47
GAPVD1-216ENST00000474637 BCL11AQ9H165 835 aa5.84□□□□□ -1.47
GAPVD1-216ENST00000474637 NBPF8Q3BBV2 869 aa5.84□□□□□ -1.47
GAPVD1-216ENST00000474637 RNF216Q9NWF9 866 aaPredicted RBP5.84□□□□□ -1.47
GAPVD1-216ENST00000474637 FMN2Q9NZ56 1722 aa5.84□□□□□ -1.47
GAPVD1-216ENST00000474637 C1orf167Q5SNV9 1468 aa5.84□□□□□ -1.48
GAPVD1-216ENST00000474637 CENPJQ9HC77 1338 aaPredicted RBP5.83□□□□□ -1.48
GAPVD1-216ENST00000474637 ANKARQ7Z5J8 1434 aa5.83□□□□□ -1.48
GAPVD1-216ENST00000474637 AHDC1Q5TGY3 1603 aaPredicted RBP5.83□□□□□ -1.48
GAPVD1-216ENST00000474637 SLC24A1O60721 1099 aa5.83□□□□□ -1.48
GAPVD1-216ENST00000474637 CARD11Q9BXL7 1154 aa5.83□□□□□ -1.48
GAPVD1-216ENST00000474637 KIF1AQ12756 1690 aa5.82□□□□□ -1.48
GAPVD1-216ENST00000474637 QRICH2Q9H0J4 1663 aa5.82□□□□□ -1.48
GAPVD1-216ENST00000474637 PHLPP1O60346 1717 aa5.82□□□□□ -1.48
GAPVD1-216ENST00000474637 TULP4Q9NRJ4 1543 aa5.82□□□□□ -1.48
GAPVD1-216ENST00000474637 WASLO00401 505 aaPredicted RBP5.82□□□□□ -1.48
GAPVD1-216ENST00000474637 SAFB2Q14151 953 aaKnown RBP eCLIP5.82□□□□□ -1.48
GAPVD1-216ENST00000474637 NHSL1Q5SYE7 1610 aa5.82□□□□□ -1.48
GAPVD1-216ENST00000474637 HSPA1LP34931 641 aa5.81□□□□□ -1.48
GAPVD1-216ENST00000474637 BRINP3Q76B58 766 aa5.81□□□□□ -1.48
GAPVD1-216ENST00000474637 HIRIP3Q9BW71 556 aaPredicted RBP5.81□□□□□ -1.48
GAPVD1-216ENST00000474637 MINK1Q8N4C8 1332 aaPredicted RBP5.81□□□□□ -1.48
GAPVD1-216ENST00000474637 ITSN1Q15811 1721 aa5.81□□□□□ -1.48
GAPVD1-216ENST00000474637 SBNO2Q9Y2G9 1366 aa5.81□□□□□ -1.48
GAPVD1-216ENST00000474637 DDX10Q13206 875 aaKnown RBP5.8□□□□□ -1.48
GAPVD1-216ENST00000474637 ESCO1Q5FWF5 840 aa5.8□□□□□ -1.48
GAPVD1-216ENST00000474637 EVC2Q86UK5 1308 aa5.8□□□□□ -1.48
GAPVD1-216ENST00000474637 CDK19Q9BWU1 502 aa5.8□□□□□ -1.48
GAPVD1-216ENST00000474637 NPHP3Q7Z494 1330 aa5.8□□□□□ -1.48
GAPVD1-216ENST00000474637 COL16A1Q07092 1604 aaPredicted RBP5.79□□□□□ -1.48
GAPVD1-216ENST00000474637 USP32Q8NFA0 1604 aa5.79□□□□□ -1.48
GAPVD1-216ENST00000474637 HOXD11P31277 338 aaPredicted RBP5.79□□□□□ -1.48
GAPVD1-216ENST00000474637 JCADQ9P266 1359 aa5.79□□□□□ -1.48
GAPVD1-216ENST00000474637 PSME1Q06323 249 aa5.79□□□□□ -1.48
GAPVD1-216ENST00000474637 PUS7Q96PZ0 661 aaKnown RBP5.79□□□□□ -1.48
GAPVD1-216ENST00000474637 ORAI2Q96SN7 254 aa5.79□□□□□ -1.48
GAPVD1-216ENST00000474637 PHF8Q9UPP1 1060 aa5.79□□□□□ -1.48
GAPVD1-216ENST00000474637 SHPRHQ149N8 1683 aa5.78□□□□□ -1.48
GAPVD1-216ENST00000474637 TOPAZ1Q8N9V7 1692 aa5.78□□□□□ -1.48
GAPVD1-216ENST00000474637 LRRC59Q96AG4 307 aaKnown RBP5.78□□□□□ -1.48
GAPVD1-216ENST00000474637 NUDT16Q96DE0 195 aaKnown RBP5.78□□□□□ -1.48
GAPVD1-216ENST00000474637 RGPD8O14715 1765 aaPredicted RBP5.78□□□□□ -1.48
GAPVD1-216ENST00000474637 ATP7BP35670 1465 aa5.78□□□□□ -1.48
GAPVD1-216ENST00000474637 USP47Q96K76 1375 aa5.78□□□□□ -1.48
GAPVD1-216ENST00000474637 SOS2Q07890 1332 aaPredicted RBP5.78□□□□□ -1.48
GAPVD1-216ENST00000474637 SRPK2P78362 688 aaKnown RBP5.78□□□□□ -1.48
GAPVD1-216ENST00000474637 PXDNQ92626 1479 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 ATAD2Q6PL18 1390 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 NUTM2FA1L443 756 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 ZBTB22O15209 634 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 CCDC61Q9Y6R9 512 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 SBNO1A3KN83 1393 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 BRD4O60885 1362 aaPredicted RBP5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 SPATA31A6Q5VVP1 1343 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 PRR36Q9H6K5 1346 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 PLEKHG3A1L390 1219 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 CDCA8Q53HL2 280 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 ANP32EQ9BTT0 268 aa5.77□□□□□ -1.49
GAPVD1-216ENST00000474637 ST20-MTHFSA0A0A6YYL1 179 aa5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 KRT28Q7Z3Y7 464 aa5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 NGDNQ8NEJ9 315 aaKnown RBP5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 COL22A1Q8NFW1 1626 aaPredicted RBP5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 PPIP5K1Q6PFW1 1433 aa5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 POLR3AO14802 1390 aaPredicted RBP5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 NINLQ9Y2I6 1382 aa5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 FOXO3O43524 673 aa5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 EIF4G2P78344 907 aaKnown RBP eCLIP5.76□□□□□ -1.49
GAPVD1-216ENST00000474637 TMF1P82094 1093 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms