RNA–Protein interactions for RNA: ENST00000474586.5

TRA2A-204, Transcript of transformer 2 alpha homolog, humanhuman

TSL 3

Gene TRA2A, Length 868 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-204ENST00000474586 PNPLA6Q8IY17 1366 aa31.29■■■□□ 2.6
TRA2A-204ENST00000474586 ABCC11Q96J66 1382 aa31.29■■■□□ 2.6
TRA2A-204ENST00000474586 C14orf93Q9H972 538 aaKnown RBP31.26■■■□□ 2.59
TRA2A-204ENST00000474586 LAMC1P11047 1609 aa31.26■■■□□ 2.59
TRA2A-204ENST00000474586 PLEKHH1Q9ULM0 1364 aa31.25■■■□□ 2.59
TRA2A-204ENST00000474586 CDC42BPGQ6DT37 1551 aa31.25■■■□□ 2.59
TRA2A-204ENST00000474586 SOS2Q07890 1332 aaPredicted RBP31.24■■■□□ 2.59
TRA2A-204ENST00000474586 YTHDC2Q9H6S0 1430 aaKnown RBP31.24■■■□□ 2.59
TRA2A-204ENST00000474586 ESCO1Q5FWF5 840 aa31.23■■■□□ 2.59
TRA2A-204ENST00000474586 KNDC1Q76NI1 1749 aa31.23■■■□□ 2.59
TRA2A-204ENST00000474586 NRXN1Q9ULB1 1477 aa31.22■■■□□ 2.59
TRA2A-204ENST00000474586 CFAP70Q5T0N1 1121 aa31.22■■■□□ 2.59
TRA2A-204ENST00000474586 AFF2P51816 1311 aa31.21■■■□□ 2.59
TRA2A-204ENST00000474586 MYOM2P54296 1465 aa31.21■■■□□ 2.59
TRA2A-204ENST00000474586 NUTM2FA1L443 756 aa31.2■■■□□ 2.59
TRA2A-204ENST00000474586 C8orf37Q96NL8 207 aa31.18■■■□□ 2.58
TRA2A-204ENST00000474586 SIRT1Q96EB6 747 aa31.16■■■□□ 2.58
TRA2A-204ENST00000474586 DHX57Q6P158 1386 aaKnown RBP31.16■■■□□ 2.58
TRA2A-204ENST00000474586 ADAMTS2O95450 1211 aa31.15■■■□□ 2.58
TRA2A-204ENST00000474586 HRCP23327 699 aa31.15■■■□□ 2.58
TRA2A-204ENST00000474586 FOXO3O43524 673 aa31.14■■■□□ 2.58
TRA2A-204ENST00000474586 RXRBP28702 533 aa31.14■■■□□ 2.58
TRA2A-204ENST00000474586 NPHP3Q7Z494 1330 aa31.14■■■□□ 2.58
TRA2A-204ENST00000474586 XPCQ01831 940 aaPredicted RBP31.12■■■□□ 2.57
TRA2A-204ENST00000474586 KDM2AQ9Y2K7 1162 aa31.1■■■□□ 2.57
TRA2A-204ENST00000474586 FMN2Q9NZ56 1722 aa31.1■■■□□ 2.57
TRA2A-204ENST00000474586 PXDNQ92626 1479 aa31.09■■■□□ 2.57
TRA2A-204ENST00000474586 NGLY1Q96IV0 654 aa31.09■■■□□ 2.57
TRA2A-204ENST00000474586 PRAM1Q96QH2 718 aa31.08■■■□□ 2.57
TRA2A-204ENST00000474586 SAFB2Q14151 953 aaKnown RBP eCLIP31.07■■■□□ 2.561e-8■■□□□ 12.9
TRA2A-204ENST00000474586 DCAF11Q8TEB1 546 aa31.07■■■□□ 2.56
TRA2A-204ENST00000474586 QTRT2Q9H974 415 aaKnown RBP31.06■■■□□ 2.56
TRA2A-204ENST00000474586 COL22A1Q8NFW1 1626 aaPredicted RBP31.04■■■□□ 2.56
TRA2A-204ENST00000474586 POGKQ9P215 609 aa31.02■■■□□ 2.56
TRA2A-204ENST00000474586 ADGRB1O14514 1584 aa31.01■■■□□ 2.56
TRA2A-204ENST00000474586 DLC1Q96QB1 1528 aa31■■■□□ 2.55
TRA2A-204ENST00000474586 TRAK1Q9UPV9 953 aa31■■■□□ 2.55
TRA2A-204ENST00000474586 CDK12Q9NYV4 1490 aaPredicted RBP31■■■□□ 2.55
TRA2A-204ENST00000474586 RBM6P78332 1123 aaKnown RBP30.99■■■□□ 2.55
TRA2A-204ENST00000474586 RGPD8O14715 1765 aaPredicted RBP30.99■■■□□ 2.55
TRA2A-204ENST00000474586 KIF1AQ12756 1690 aa30.98■■■□□ 2.55
TRA2A-204ENST00000474586 USP21Q9UK80 565 aa30.98■■■□□ 2.55
TRA2A-204ENST00000474586 KRT28Q7Z3Y7 464 aa30.97■■■□□ 2.55
TRA2A-204ENST00000474586 PHF8Q9UPP1 1060 aa30.97■■■□□ 2.55
TRA2A-204ENST00000474586 STAC3Q96MF2 364 aa30.96■■■□□ 2.55
TRA2A-204ENST00000474586 FNBP4Q8N3X1 1017 aaPredicted RBP30.95■■■□□ 2.55
TRA2A-204ENST00000474586 SPATA31A3Q5VYP0 1347 aa30.95■■■□□ 2.54
TRA2A-204ENST00000474586 UPF1Q92900 1129 aaKnown RBP eCLIP30.94■■■□□ 2.54
TRA2A-204ENST00000474586 HIRIP3Q9BW71 556 aaPredicted RBP30.92■■■□□ 2.54
TRA2A-204ENST00000474586 RGS12O14924 1447 aa30.91■■■□□ 2.54
TRA2A-204ENST00000474586 TRPC5Q9UL62 973 aaPredicted RBP30.9■■■□□ 2.54
TRA2A-204ENST00000474586 MINK1Q8N4C8 1332 aaPredicted RBP30.9■■■□□ 2.54
TRA2A-204ENST00000474586 PSME1Q06323 249 aa30.88■■■□□ 2.53
TRA2A-204ENST00000474586 ADGRB2O60241 1585 aa30.88■■■□□ 2.53
TRA2A-204ENST00000474586 USP32Q8NFA0 1604 aa30.87■■■□□ 2.53
TRA2A-204ENST00000474586 MARF1Q9Y4F3 1742 aaKnown RBP30.87■■■□□ 2.53
TRA2A-204ENST00000474586 PMFBP1Q8TBY8 1022 aa30.87■■■□□ 2.53
TRA2A-204ENST00000474586 ANKARQ7Z5J8 1434 aa30.86■■■□□ 2.53
TRA2A-204ENST00000474586 ATRNO75882 1429 aa30.84■■■□□ 2.53
TRA2A-204ENST00000474586 BCL9LQ86UU0 1499 aa30.83■■■□□ 2.53
TRA2A-204ENST00000474586 TNS3Q68CZ2 1445 aa30.83■■■□□ 2.53
TRA2A-204ENST00000474586 PLEKHG5O94827 1062 aa30.82■■■□□ 2.52
TRA2A-204ENST00000474586 SBNO1A3KN83 1393 aa30.81■■■□□ 2.52
TRA2A-204ENST00000474586 PRR36Q9H6K5 1346 aa30.81■■■□□ 2.52
TRA2A-204ENST00000474586 WASLO00401 505 aaPredicted RBP30.81■■■□□ 2.52
TRA2A-204ENST00000474586 LMOD2Q6P5Q4 547 aa30.8■■■□□ 2.52
TRA2A-204ENST00000474586 CABLES1Q8TDN4 633 aa30.8■■■□□ 2.52
TRA2A-204ENST00000474586 HAP1P54257 671 aaPredicted RBP30.77■■■□□ 2.52
TRA2A-204ENST00000474586 ARHGEF28Q8N1W1 1705 aaKnown RBP30.77■■■□□ 2.52
TRA2A-204ENST00000474586 EIF3AQ14152 1382 aaKnown RBP30.77■■■□□ 2.52
TRA2A-204ENST00000474586 TULP4Q9NRJ4 1543 aa30.76■■■□□ 2.51
TRA2A-204ENST00000474586 ARHGEF10O15013 1369 aa30.74■■■□□ 2.51
TRA2A-204ENST00000474586 UNC5CLQ8IV45 518 aa30.73■■■□□ 2.51
TRA2A-204ENST00000474586 GJD4Q96KN9 370 aaPredicted RBP30.73■■■□□ 2.51
TRA2A-204ENST00000474586 SLIT2O94813 1529 aa30.73■■■□□ 2.51
TRA2A-204ENST00000474586 GPRASP1Q5JY77 1395 aa30.71■■■□□ 2.51
TRA2A-204ENST00000474586 NBPF1Q3BBV0 1214 aa30.71■■■□□ 2.51
TRA2A-204ENST00000474586 KIAA1210Q9ULL0 1709 aa30.7■■■□□ 2.5
TRA2A-204ENST00000474586 NGDNQ8NEJ9 315 aaKnown RBP30.69■■■□□ 2.5
TRA2A-204ENST00000474586 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.69■■■□□ 2.5
TRA2A-204ENST00000474586 TRPM3Q9HCF6 1732 aaPredicted RBP30.69■■■□□ 2.5
TRA2A-204ENST00000474586 NUDT16Q96DE0 195 aaKnown RBP30.68■■■□□ 2.5
TRA2A-204ENST00000474586 ATAD2Q6PL18 1390 aa30.67■■■□□ 2.5
TRA2A-204ENST00000474586 ABCA3Q99758 1704 aa30.67■■■□□ 2.5
TRA2A-204ENST00000474586 CDK19Q9BWU1 502 aa30.66■■■□□ 2.5
TRA2A-204ENST00000474586 ATP7BP35670 1465 aa30.63■■■□□ 2.49
TRA2A-204ENST00000474586 RALGAPBQ86X10 1494 aa30.63■■■□□ 2.49
TRA2A-204ENST00000474586 ALS2Q96Q42 1657 aa30.63■■■□□ 2.49
TRA2A-204ENST00000474586 GLI3P10071 1580 aa30.62■■■□□ 2.49
TRA2A-204ENST00000474586 FAM83GA6ND36 823 aa30.62■■■□□ 2.49
TRA2A-204ENST00000474586 PAK3O75914 559 aaPredicted RBP30.62■■■□□ 2.49
TRA2A-204ENST00000474586 L3MBTL2Q969R5 705 aa30.61■■■□□ 2.49
TRA2A-204ENST00000474586 SIN3AQ96ST3 1273 aa30.61■■■□□ 2.49
TRA2A-204ENST00000474586 PLCH1Q4KWH8 1693 aa30.61■■■□□ 2.49
TRA2A-204ENST00000474586 ITSN1Q15811 1721 aa30.6■■■□□ 2.49
TRA2A-204ENST00000474586 VPS72Q15906 364 aa30.58■■■□□ 2.49
TRA2A-204ENST00000474586 NWD2Q9ULI1 1742 aa30.58■■■□□ 2.49
TRA2A-204ENST00000474586 CCDC9Q9Y3X0 531 aaKnown RBP30.57■■■□□ 2.48
TRA2A-204ENST00000474586 NEUROD1Q13562 356 aa30.55■■■□□ 2.48
TRA2A-204ENST00000474586 CCDC61Q9Y6R9 512 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms