RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 IQSEC2Q5JU85 1478 aa18.16■□□□□ 0.5
RPGR-206ENST00000474584 NFKBIBQ15653 356 aa18.15■□□□□ 0.5
RPGR-206ENST00000474584 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
RPGR-206ENST00000474584 MAPK8IP3Q9UPT6 1336 aa18.15■□□□□ 0.5
RPGR-206ENST00000474584 ADGRB1O14514 1584 aa18.15■□□□□ 0.5
RPGR-206ENST00000474584 CFAP74Q9C0B2 1584 aa18.15■□□□□ 0.5
RPGR-206ENST00000474584 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
RPGR-206ENST00000474584 NPATQ14207 1427 aa18.14■□□□□ 0.49
RPGR-206ENST00000474584 IGHDP01880 384 aa18.14■□□□□ 0.49
RPGR-206ENST00000474584 C14orf93Q9H972 538 aaKnown RBP18.13■□□□□ 0.49
RPGR-206ENST00000474584 AAMPQ13685 434 aa18.12■□□□□ 0.49
RPGR-206ENST00000474584 COG6Q9Y2V7 657 aa18.12■□□□□ 0.49
RPGR-206ENST00000474584 TNNT2P45379 298 aaPredicted RBP18.12■□□□□ 0.49
RPGR-206ENST00000474584 SLC12A5Q9H2X9 1139 aa18.12■□□□□ 0.49
RPGR-206ENST00000474584 HECW2Q9P2P5 1572 aa18.12■□□□□ 0.49
RPGR-206ENST00000474584 PANK1Q8TE04 598 aa18.11■□□□□ 0.49
RPGR-206ENST00000474584 CFAP53Q96M91 514 aa18.11■□□□□ 0.49
RPGR-206ENST00000474584 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
RPGR-206ENST00000474584 RPGRIP1LQ68CZ1 1315 aa18.1■□□□□ 0.49
RPGR-206ENST00000474584 GLI2P10070 1586 aa18.1■□□□□ 0.49
RPGR-206ENST00000474584 GSE1Q14687 1217 aa18.1■□□□□ 0.49
RPGR-206ENST00000474584 TCP11L2Q8N4U5 519 aa18.1■□□□□ 0.49
RPGR-206ENST00000474584 FRAT1Q92837 279 aaPredicted RBP18.1■□□□□ 0.49
RPGR-206ENST00000474584 WDR63Q8IWG1 891 aa18.1■□□□□ 0.49
RPGR-206ENST00000474584 ARHGEF28Q8N1W1 1705 aaKnown RBP18.09■□□□□ 0.49
RPGR-206ENST00000474584 FRMPD1Q5SYB0 1578 aa18.09■□□□□ 0.49
RPGR-206ENST00000474584 RARSP54136 660 aaKnown RBP18.09■□□□□ 0.49
RPGR-206ENST00000474584 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
RPGR-206ENST00000474584 RRP7AQ9Y3A4 280 aaKnown RBP18.09■□□□□ 0.49
RPGR-206ENST00000474584 POGZQ7Z3K3 1410 aa18.08■□□□□ 0.49
RPGR-206ENST00000474584 PMFBP1Q8TBY8 1022 aa18.08■□□□□ 0.48
RPGR-206ENST00000474584 NSD2O96028 1365 aa18.08■□□□□ 0.48
RPGR-206ENST00000474584 CCDC27Q2M243 656 aa18.07■□□□□ 0.48
RPGR-206ENST00000474584 CAMSAP1Q5T5Y3 1602 aa18.07■□□□□ 0.48
RPGR-206ENST00000474584 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
RPGR-206ENST00000474584 MTHFSP49914 203 aa18.07■□□□□ 0.48
RPGR-206ENST00000474584 ABCC3O15438 1527 aa18.06■□□□□ 0.48
RPGR-206ENST00000474584 TMEM132EQ6IEE7 984 aa18.06■□□□□ 0.48
RPGR-206ENST00000474584 PUS7Q96PZ0 661 aaKnown RBP18.06■□□□□ 0.48
RPGR-206ENST00000474584 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
RPGR-206ENST00000474584 ANKRD36BQ8N2N9 1353 aa18.05■□□□□ 0.48
RPGR-206ENST00000474584 GGT6Q6P531 493 aa18.05■□□□□ 0.48
RPGR-206ENST00000474584 ZMYM3Q14202 1370 aa18.05■□□□□ 0.48
RPGR-206ENST00000474584 MYH16Q9H6N6 1097 aa18.05■□□□□ 0.48
RPGR-206ENST00000474584 NCBP3Q53F19 620 aaKnown RBP18.04■□□□□ 0.48
RPGR-206ENST00000474584 IL27Q8NEV9 243 aa18.04■□□□□ 0.48
RPGR-206ENST00000474584 TULP4Q9NRJ4 1543 aa18.04■□□□□ 0.48
RPGR-206ENST00000474584 ADGRB2O60241 1585 aa18.04■□□□□ 0.48
RPGR-206ENST00000474584 PIK3C2BO00750 1634 aa18.04■□□□□ 0.48
RPGR-206ENST00000474584 SIGLEC1Q9BZZ2 1709 aa18.02■□□□□ 0.48
RPGR-206ENST00000474584 USP19O94966 1318 aa18.02■□□□□ 0.48
RPGR-206ENST00000474584 BECN1Q14457 450 aa18.02■□□□□ 0.47
RPGR-206ENST00000474584 NEXMIFQ5QGS0 1516 aa18.02■□□□□ 0.47
RPGR-206ENST00000474584 CD109Q6YHK3 1445 aa18.01■□□□□ 0.47
RPGR-206ENST00000474584 VGFO15240 615 aaPredicted RBP18■□□□□ 0.47
RPGR-206ENST00000474584 NPM1P06748 294 aaKnown RBP eCLIP18■□□□□ 0.47
RPGR-206ENST00000474584 RLBP1P12271 317 aa18■□□□□ 0.47
RPGR-206ENST00000474584 BCL2L13Q9BXK5 485 aa18■□□□□ 0.47
RPGR-206ENST00000474584 UPF2Q9HAU5 1272 aaKnown RBP18■□□□□ 0.47
RPGR-206ENST00000474584 NLRP1Q9C000 1473 aa18■□□□□ 0.47
RPGR-206ENST00000474584 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
RPGR-206ENST00000474584 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.47
RPGR-206ENST00000474584 FRAT2O75474 233 aaPredicted RBP17.99■□□□□ 0.47
RPGR-206ENST00000474584 RWDD1Q9H446 243 aaPredicted RBP17.99■□□□□ 0.47
RPGR-206ENST00000474584 PCDHB15Q9Y5E8 787 aa17.99■□□□□ 0.47
RPGR-206ENST00000474584 SEC24BO95487 1268 aa17.98■□□□□ 0.47
RPGR-206ENST00000474584 ANKRD26Q9UPS8 1709 aa17.97■□□□□ 0.47
RPGR-206ENST00000474584 CT47B1P0C2W7 299 aaPredicted RBP17.97■□□□□ 0.47
RPGR-206ENST00000474584 TNNQ9UQP3 1299 aa17.96■□□□□ 0.47
RPGR-206ENST00000474584 MVPQ14764 893 aaKnown RBP17.96■□□□□ 0.47
RPGR-206ENST00000474584 FTSJ3Q8IY81 847 aaKnown RBP17.96■□□□□ 0.47
RPGR-206ENST00000474584 ZKSCAN2Q63HK3 967 aa17.95■□□□□ 0.46
RPGR-206ENST00000474584 PDZRN3Q9UPQ7 1066 aa17.95■□□□□ 0.46
RPGR-206ENST00000474584 ABCC11Q96J66 1382 aa17.95■□□□□ 0.46
RPGR-206ENST00000474584 CABP2Q9NPB3 220 aa17.94■□□□□ 0.46
RPGR-206ENST00000474584 A0A1W2PP64 1363 aa17.93■□□□□ 0.46
RPGR-206ENST00000474584 NUTM2DQ5VT03 806 aaPredicted RBP17.93■□□□□ 0.46
RPGR-206ENST00000474584 DZIP1LQ8IYY4 767 aaKnown RBP17.93■□□□□ 0.46
RPGR-206ENST00000474584 RTN4Q9NQC3 1192 aaKnown RBP17.92■□□□□ 0.46
RPGR-206ENST00000474584 TBC1D32Q96NH3 1257 aa17.92■□□□□ 0.46
RPGR-206ENST00000474584 MYO5BQ9ULV0 1848 aa17.92■□□□□ 0.46
RPGR-206ENST00000474584 ZFYVE9O95405 1425 aa17.92■□□□□ 0.46
RPGR-206ENST00000474584 DIP2CQ9Y2E4 1556 aa17.92■□□□□ 0.46
RPGR-206ENST00000474584 ARHGAP31Q2M1Z3 1444 aa17.91■□□□□ 0.46
RPGR-206ENST00000474584 BRPF3Q9ULD4 1205 aa17.91■□□□□ 0.46
RPGR-206ENST00000474584 NEO1Q92859 1461 aa17.91■□□□□ 0.46
RPGR-206ENST00000474584 U2SURPO15042 1029 aaKnown RBP17.9■□□□□ 0.46
RPGR-206ENST00000474584 SRPK2P78362 688 aaKnown RBP17.9■□□□□ 0.46
RPGR-206ENST00000474584 SMC4Q9NTJ3 1288 aa17.9■□□□□ 0.46
RPGR-206ENST00000474584 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
RPGR-206ENST00000474584 CLTCQ00610 1675 aaKnown RBP17.9■□□□□ 0.46
RPGR-206ENST00000474584 ATAD2Q6PL18 1390 aa17.9■□□□□ 0.46
RPGR-206ENST00000474584 SAFB2Q14151 953 aaKnown RBP eCLIP17.89■□□□□ 0.46
RPGR-206ENST00000474584 TSR2Q969E8 191 aaKnown RBP17.89■□□□□ 0.45
RPGR-206ENST00000474584 MED14O60244 1454 aa17.89■□□□□ 0.45
RPGR-206ENST00000474584 TMPOP42166 694 aaKnown RBP17.88■□□□□ 0.45
RPGR-206ENST00000474584 SLKQ9H2G2 1235 aaPredicted RBP17.88■□□□□ 0.45
RPGR-206ENST00000474584 PLEKHF1Q96S99 279 aa17.88■□□□□ 0.45
RPGR-206ENST00000474584 TERF2IPQ9NYB0 399 aa17.88■□□□□ 0.45
RPGR-206ENST00000474584 DDX19BQ9UMR2 479 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms