RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 KNDC1Q76NI1 1749 aa14.26□□□□□ -0.13
COL12A1-206ENST00000474564 WASHC2AQ641Q2 1341 aa14.25□□□□□ -0.13
COL12A1-206ENST00000474564 ARHGEF28Q8N1W1 1705 aaKnown RBP14.25□□□□□ -0.13
COL12A1-206ENST00000474564 WASLO00401 505 aaPredicted RBP14.25□□□□□ -0.13
COL12A1-206ENST00000474564 DDX10Q13206 875 aaKnown RBP14.25□□□□□ -0.13
COL12A1-206ENST00000474564 CDK19Q9BWU1 502 aa14.25□□□□□ -0.13
COL12A1-206ENST00000474564 NKTRP30414 1462 aaKnown RBP14.25□□□□□ -0.13
COL12A1-206ENST00000474564 ATAD2Q6PL18 1390 aa14.24□□□□□ -0.13
COL12A1-206ENST00000474564 TMC1Q8TDI8 760 aa14.24□□□□□ -0.13
COL12A1-206ENST00000474564 QRICH2Q9H0J4 1663 aa14.23□□□□□ -0.13
COL12A1-206ENST00000474564 CHD2O14647 1828 aaKnown RBP14.23□□□□□ -0.13
COL12A1-206ENST00000474564 STRCQ7RTU9 1775 aa14.23□□□□□ -0.13
COL12A1-206ENST00000474564 NCOA3Q9Y6Q9 1424 aa14.23□□□□□ -0.13
COL12A1-206ENST00000474564 ATF3P18847 181 aa14.22□□□□□ -0.13
COL12A1-206ENST00000474564 C19orf44Q9H6X5 657 aa14.22□□□□□ -0.13
COL12A1-206ENST00000474564 DISP3Q9P2K9 1392 aa14.22□□□□□ -0.13
COL12A1-206ENST00000474564 PLEKHH1Q9ULM0 1364 aa14.22□□□□□ -0.13
COL12A1-206ENST00000474564 NINLQ9Y2I6 1382 aa14.22□□□□□ -0.13
COL12A1-206ENST00000474564 XRN1Q8IZH2 1706 aaKnown RBP14.21□□□□□ -0.13
COL12A1-206ENST00000474564 C11orf95C9JLR9 678 aaPredicted RBP14.21□□□□□ -0.13
COL12A1-206ENST00000474564 CABP2Q9NPB3 220 aa14.21□□□□□ -0.13
COL12A1-206ENST00000474564 TERF2IPQ9NYB0 399 aa14.21□□□□□ -0.13
COL12A1-206ENST00000474564 HDGFL2Q7Z4V5 671 aaPredicted RBP14.2□□□□□ -0.14
COL12A1-206ENST00000474564 CCDC61Q9Y6R9 512 aa14.2□□□□□ -0.14
COL12A1-206ENST00000474564 NWD1Q149M9 1564 aa14.2□□□□□ -0.14
COL12A1-206ENST00000474564 CADPS2Q86UW7 1296 aa14.19□□□□□ -0.14
COL12A1-206ENST00000474564 NUDT16Q96DE0 195 aaKnown RBP14.19□□□□□ -0.14
COL12A1-206ENST00000474564 MSH6P52701 1360 aa14.19□□□□□ -0.14
COL12A1-206ENST00000474564 ZNF335Q9H4Z2 1342 aaPredicted RBP14.18□□□□□ -0.14
COL12A1-206ENST00000474564 KNSTRNQ9Y448 316 aa14.18□□□□□ -0.14
COL12A1-206ENST00000474564 ADGRL3Q9HAR2 1447 aa14.17□□□□□ -0.14
COL12A1-206ENST00000474564 TMEM94Q12767 1356 aa14.17□□□□□ -0.14
COL12A1-206ENST00000474564 ANP32CO43423 234 aa14.16□□□□□ -0.14
COL12A1-206ENST00000474564 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
COL12A1-206ENST00000474564 PANK3Q9H999 370 aa14.16□□□□□ -0.14
COL12A1-206ENST00000474564 RBM33Q96EV2 1170 aaKnown RBP14.15□□□□□ -0.14
COL12A1-206ENST00000474564 NUTM2FA1L443 756 aa14.14□□□□□ -0.15
COL12A1-206ENST00000474564 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
COL12A1-206ENST00000474564 SLC12A5Q9H2X9 1139 aa14.14□□□□□ -0.15
COL12A1-206ENST00000474564 CABP1Q9NZU7 370 aa14.14□□□□□ -0.15
COL12A1-206ENST00000474564 ANKARQ7Z5J8 1434 aa14.14□□□□□ -0.15
COL12A1-206ENST00000474564 ADGRB2O60241 1585 aa14.13□□□□□ -0.15
COL12A1-206ENST00000474564 TULP4Q9NRJ4 1543 aa14.13□□□□□ -0.15
COL12A1-206ENST00000474564 DCCP43146 1447 aa14.12□□□□□ -0.15
COL12A1-206ENST00000474564 ESCO1Q5FWF5 840 aa14.11□□□□□ -0.15
COL12A1-206ENST00000474564 PPIP5K1Q6PFW1 1433 aa14.11□□□□□ -0.15
COL12A1-206ENST00000474564 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.11□□□□□ -0.15
COL12A1-206ENST00000474564 CDC42BPGQ6DT37 1551 aa14.1□□□□□ -0.15
COL12A1-206ENST00000474564 PLEKHG3A1L390 1219 aa14.1□□□□□ -0.15
COL12A1-206ENST00000474564 LRRC7Q96NW7 1537 aa14.1□□□□□ -0.15
COL12A1-206ENST00000474564 ANKRD36BQ8N2N9 1353 aa14.09□□□□□ -0.15
COL12A1-206ENST00000474564 PHF8Q9UPP1 1060 aa14.09□□□□□ -0.15
COL12A1-206ENST00000474564 CGNL1Q0VF96 1302 aa14.09□□□□□ -0.15
COL12A1-206ENST00000474564 PSME1Q06323 249 aa14.08□□□□□ -0.16
COL12A1-206ENST00000474564 KTN1Q86UP2 1357 aaKnown RBP14.08□□□□□ -0.16
COL12A1-206ENST00000474564 ATP7BP35670 1465 aa14.07□□□□□ -0.16
COL12A1-206ENST00000474564 PMFBP1Q8TBY8 1022 aa14.07□□□□□ -0.16
COL12A1-206ENST00000474564 SLAIN2Q9P270 581 aa14.07□□□□□ -0.16
COL12A1-206ENST00000474564 ACEP12821 1306 aa14.07□□□□□ -0.16
COL12A1-206ENST00000474564 TOM1O60784 492 aa14.06□□□□□ -0.16
COL12A1-206ENST00000474564 RALBP1Q15311 655 aa14.06□□□□□ -0.16
COL12A1-206ENST00000474564 PRR36Q9H6K5 1346 aa14.06□□□□□ -0.16
COL12A1-206ENST00000474564 NALCNQ8IZF0 1738 aa14.06□□□□□ -0.16
COL12A1-206ENST00000474564 ITSN1Q15811 1721 aa14.05□□□□□ -0.16
COL12A1-206ENST00000474564 BRD4O60885 1362 aaPredicted RBP14.05□□□□□ -0.16
COL12A1-206ENST00000474564 FMN2Q9NZ56 1722 aa14.04□□□□□ -0.16
COL12A1-206ENST00000474564 STRCP1A6NGW2 1772 aa14.04□□□□□ -0.16
COL12A1-206ENST00000474564 PER1O15534 1290 aaPredicted RBP14.04□□□□□ -0.16
COL12A1-206ENST00000474564 CNGB1Q14028 1251 aaPredicted RBP14.04□□□□□ -0.16
COL12A1-206ENST00000474564 CC2D1BQ5T0F9 858 aaKnown RBP14.03□□□□□ -0.16
COL12A1-206ENST00000474564 A0A1W2PP64 1363 aa14.03□□□□□ -0.16
COL12A1-206ENST00000474564 NSD2O96028 1365 aa14.03□□□□□ -0.16
COL12A1-206ENST00000474564 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
COL12A1-206ENST00000474564 C1orf167Q5SNV9 1468 aa14.02□□□□□ -0.16
COL12A1-206ENST00000474564 EDC4Q6P2E9 1401 aaKnown RBP14.02□□□□□ -0.16
COL12A1-206ENST00000474564 NPHP3Q7Z494 1330 aa14.02□□□□□ -0.17
COL12A1-206ENST00000474564 TTC21AQ8NDW8 1320 aa14.02□□□□□ -0.17
COL12A1-206ENST00000474564 PAK3O75914 559 aaPredicted RBP14.02□□□□□ -0.17
COL12A1-206ENST00000474564 MORC1Q86VD1 984 aa14.02□□□□□ -0.17
COL12A1-206ENST00000474564 CARD14Q9BXL6 1004 aa14.02□□□□□ -0.17
COL12A1-206ENST00000474564 CPSF1Q10570 1443 aaKnown RBP14.01□□□□□ -0.17
COL12A1-206ENST00000474564 POLR3AO14802 1390 aaPredicted RBP14.01□□□□□ -0.17
COL12A1-206ENST00000474564 NPC1L1Q9UHC9 1359 aa14.01□□□□□ -0.17
COL12A1-206ENST00000474564 FOXO3O43524 673 aa14.01□□□□□ -0.17
COL12A1-206ENST00000474564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.01□□□□□ -0.17
COL12A1-206ENST00000474564 ORAI2Q96SN7 254 aa14.01□□□□□ -0.17
COL12A1-206ENST00000474564 MST1RQ04912 1400 aa14□□□□□ -0.17
COL12A1-206ENST00000474564 KRT28Q7Z3Y7 464 aa14□□□□□ -0.17
COL12A1-206ENST00000474564 COG3Q96JB2 828 aa14□□□□□ -0.17
COL12A1-206ENST00000474564 LTBP4Q8N2S1 1624 aa14□□□□□ -0.17
COL12A1-206ENST00000474564 MIER1Q8N108 512 aa13.99□□□□□ -0.17
COL12A1-206ENST00000474564 CERKQ8TCT0 537 aa13.99□□□□□ -0.17
COL12A1-206ENST00000474564 PRKRIP1Q9H875 184 aaPredicted RBP13.99□□□□□ -0.17
COL12A1-206ENST00000474564 MYOM1P52179 1685 aa13.98□□□□□ -0.17
COL12A1-206ENST00000474564 TTC21BQ7Z4L5 1316 aa13.98□□□□□ -0.17
COL12A1-206ENST00000474564 UBAP1LF5GYI3 381 aa13.98□□□□□ -0.17
COL12A1-206ENST00000474564 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
COL12A1-206ENST00000474564 ABTB2Q8N961 1025 aa13.98□□□□□ -0.17
COL12A1-206ENST00000474564 IQSEC2Q5JU85 1478 aa13.98□□□□□ -0.17
COL12A1-206ENST00000474564 USP6P35125 1406 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms