RNA–Protein interactions for RNA: ENST00000474548.1

MRPL38-206, Transcript of mitochondrial ribosomal protein L38, humanhuman

TSL 2

Gene MRPL38, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL38-206ENST00000474548 XRN1Q8IZH2 1706 aaKnown RBP23.9■■□□□ 1.42
MRPL38-206ENST00000474548 ROBO2Q9HCK4 1378 aa23.89■■□□□ 1.41
MRPL38-206ENST00000474548 EVC2Q86UK5 1308 aa23.88■■□□□ 1.41
MRPL38-206ENST00000474548 ARHGEF28Q8N1W1 1705 aaKnown RBP23.88■■□□□ 1.41
MRPL38-206ENST00000474548 WAPLQ7Z5K2 1190 aa23.87■■□□□ 1.41
MRPL38-206ENST00000474548 PROSER2Q86WR7 435 aaPredicted RBP23.86■■□□□ 1.41
MRPL38-206ENST00000474548 IQSEC2Q5JU85 1478 aa23.85■■□□□ 1.41
MRPL38-206ENST00000474548 HIRIP3Q9BW71 556 aaPredicted RBP23.83■■□□□ 1.41
MRPL38-206ENST00000474548 WASLO00401 505 aaPredicted RBP23.79■■□□□ 1.4
MRPL38-206ENST00000474548 SAFB2Q14151 953 aaKnown RBP eCLIP23.79■■□□□ 1.4
MRPL38-206ENST00000474548 C19orf44Q9H6X5 657 aa23.79■■□□□ 1.4
MRPL38-206ENST00000474548 QRICH2Q9H0J4 1663 aa23.79■■□□□ 1.4
MRPL38-206ENST00000474548 MINK1Q8N4C8 1332 aaPredicted RBP23.79■■□□□ 1.4
MRPL38-206ENST00000474548 PLEKHH1Q9ULM0 1364 aa23.78■■□□□ 1.4
MRPL38-206ENST00000474548 ZNF335Q9H4Z2 1342 aaPredicted RBP23.77■■□□□ 1.4
MRPL38-206ENST00000474548 ATAD2Q6PL18 1390 aa23.76■■□□□ 1.39
MRPL38-206ENST00000474548 CCDC7Q96M83 1385 aa23.76■■□□□ 1.39
MRPL38-206ENST00000474548 ADGRB2O60241 1585 aa23.75■■□□□ 1.39
MRPL38-206ENST00000474548 C14orf37Q86TY3 774 aa23.75■■□□□ 1.39
MRPL38-206ENST00000474548 CDK19Q9BWU1 502 aa23.75■■□□□ 1.39
MRPL38-206ENST00000474548 KIF7Q2M1P5 1343 aa23.75■■□□□ 1.39
MRPL38-206ENST00000474548 NINLQ9Y2I6 1382 aa23.75■■□□□ 1.39
MRPL38-206ENST00000474548 ADGRL3Q9HAR2 1447 aa23.75■■□□□ 1.39
MRPL38-206ENST00000474548 SRPK2P78362 688 aaKnown RBP23.74■■□□□ 1.39
MRPL38-206ENST00000474548 WASHC2AQ641Q2 1341 aa23.74■■□□□ 1.39
MRPL38-206ENST00000474548 TMEM94Q12767 1356 aa23.73■■□□□ 1.39
MRPL38-206ENST00000474548 DCCP43146 1447 aa23.73■■□□□ 1.39
MRPL38-206ENST00000474548 C11orf95C9JLR9 678 aaPredicted RBP23.72■■□□□ 1.39
MRPL38-206ENST00000474548 CADPS2Q86UW7 1296 aa23.71■■□□□ 1.39
MRPL38-206ENST00000474548 MSH6P52701 1360 aa23.7■■□□□ 1.38
MRPL38-206ENST00000474548 CCDC61Q9Y6R9 512 aa23.7■■□□□ 1.38
MRPL38-206ENST00000474548 LRRC7Q96NW7 1537 aa23.69■■□□□ 1.38
MRPL38-206ENST00000474548 ATF3P18847 181 aa23.69■■□□□ 1.38
MRPL38-206ENST00000474548 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.69■■□□□ 1.38
MRPL38-206ENST00000474548 ANKARQ7Z5J8 1434 aa23.68■■□□□ 1.38
MRPL38-206ENST00000474548 CDC42BPGQ6DT37 1551 aa23.67■■□□□ 1.38
MRPL38-206ENST00000474548 TULP4Q9NRJ4 1543 aa23.67■■□□□ 1.38
MRPL38-206ENST00000474548 STRCP1A6NGW2 1772 aa23.67■■□□□ 1.38
MRPL38-206ENST00000474548 NUDT16Q96DE0 195 aaKnown RBP23.66■■□□□ 1.38
MRPL38-206ENST00000474548 CABP2Q9NPB3 220 aa23.66■■□□□ 1.38
MRPL38-206ENST00000474548 POLR3GLQ9BT43 218 aa23.64■■□□□ 1.37
MRPL38-206ENST00000474548 ZNF692Q9BU19 519 aaPredicted RBP23.62■■□□□ 1.37
MRPL38-206ENST00000474548 TERF2IPQ9NYB0 399 aa23.62■■□□□ 1.37
MRPL38-206ENST00000474548 PLEKHG3A1L390 1219 aa23.61■■□□□ 1.37
MRPL38-206ENST00000474548 UBAP1LF5GYI3 381 aa23.6■■□□□ 1.37
MRPL38-206ENST00000474548 TMC1Q8TDI8 760 aa23.6■■□□□ 1.37
MRPL38-206ENST00000474548 RBM33Q96EV2 1170 aaKnown RBP23.6■■□□□ 1.37
MRPL38-206ENST00000474548 NALCNQ8IZF0 1738 aa23.59■■□□□ 1.37
MRPL38-206ENST00000474548 DDX10Q13206 875 aaKnown RBP23.58■■□□□ 1.37
MRPL38-206ENST00000474548 HDGFL2Q7Z4V5 671 aaPredicted RBP23.58■■□□□ 1.37
MRPL38-206ENST00000474548 CABP1Q9NZU7 370 aa23.57■■□□□ 1.36
MRPL38-206ENST00000474548 ATP7BP35670 1465 aa23.56■■□□□ 1.36
MRPL38-206ENST00000474548 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
MRPL38-206ENST00000474548 SLC12A5Q9H2X9 1139 aa23.55■■□□□ 1.36
MRPL38-206ENST00000474548 PPIP5K1Q6PFW1 1433 aa23.55■■□□□ 1.36
MRPL38-206ENST00000474548 ANKRD36BQ8N2N9 1353 aa23.54■■□□□ 1.36
MRPL38-206ENST00000474548 PANK3Q9H999 370 aa23.54■■□□□ 1.36
MRPL38-206ENST00000474548 PRR36Q9H6K5 1346 aa23.54■■□□□ 1.36
MRPL38-206ENST00000474548 BRD4O60885 1362 aaPredicted RBP23.53■■□□□ 1.36
MRPL38-206ENST00000474548 SLAIN2Q9P270 581 aa23.52■■□□□ 1.36
MRPL38-206ENST00000474548 PHF8Q9UPP1 1060 aa23.52■■□□□ 1.36
MRPL38-206ENST00000474548 ITSN1Q15811 1721 aa23.51■■□□□ 1.35
MRPL38-206ENST00000474548 ESCO1Q5FWF5 840 aa23.51■■□□□ 1.35
MRPL38-206ENST00000474548 XIRP1Q702N8 1843 aaKnown RBP23.51■■□□□ 1.35
MRPL38-206ENST00000474548 MST1RQ04912 1400 aa23.5■■□□□ 1.35
MRPL38-206ENST00000474548 C1orf167Q5SNV9 1468 aa23.5■■□□□ 1.35
MRPL38-206ENST00000474548 TOM1O60784 492 aa23.5■■□□□ 1.35
MRPL38-206ENST00000474548 KNSTRNQ9Y448 316 aa23.5■■□□□ 1.35
MRPL38-206ENST00000474548 POLR3AO14802 1390 aaPredicted RBP23.5■■□□□ 1.35
MRPL38-206ENST00000474548 NGDNQ8NEJ9 315 aaKnown RBP23.49■■□□□ 1.35
MRPL38-206ENST00000474548 CPSF1Q10570 1443 aaKnown RBP23.49■■□□□ 1.35
MRPL38-206ENST00000474548 NUTM2FA1L443 756 aa23.48■■□□□ 1.35
MRPL38-206ENST00000474548 PER1O15534 1290 aaPredicted RBP23.48■■□□□ 1.35
MRPL38-206ENST00000474548 DIEXFQ68CQ4 756 aaKnown RBP23.47■■□□□ 1.35
MRPL38-206ENST00000474548 ACEP12821 1306 aa23.47■■□□□ 1.35
MRPL38-206ENST00000474548 TOPAZ1Q8N9V7 1692 aa23.45■■□□□ 1.34
MRPL38-206ENST00000474548 USP32Q8NFA0 1604 aa23.45■■□□□ 1.34
MRPL38-206ENST00000474548 MED1Q15648 1581 aaPredicted RBP23.45■■□□□ 1.34
MRPL38-206ENST00000474548 NPC1L1Q9UHC9 1359 aa23.45■■□□□ 1.34
MRPL38-206ENST00000474548 KTN1Q86UP2 1357 aaKnown RBP23.44■■□□□ 1.34
MRPL38-206ENST00000474548 HSPA1LP34931 641 aa23.44■■□□□ 1.34
MRPL38-206ENST00000474548 MYOM1P52179 1685 aa23.44■■□□□ 1.34
MRPL38-206ENST00000474548 A0A1W2PP64 1363 aa23.43■■□□□ 1.34
MRPL38-206ENST00000474548 CGNL1Q0VF96 1302 aa23.43■■□□□ 1.34
MRPL38-206ENST00000474548 PSME1Q06323 249 aa23.43■■□□□ 1.34
MRPL38-206ENST00000474548 NPHP3Q7Z494 1330 aa23.42■■□□□ 1.34
MRPL38-206ENST00000474548 PMFBP1Q8TBY8 1022 aa23.42■■□□□ 1.34
MRPL38-206ENST00000474548 ORAI2Q96SN7 254 aa23.42■■□□□ 1.34
MRPL38-206ENST00000474548 CD163L1Q9NR16 1453 aa23.42■■□□□ 1.34
MRPL38-206ENST00000474548 EDC4Q6P2E9 1401 aaKnown RBP23.42■■□□□ 1.34
MRPL38-206ENST00000474548 KIF1AQ12756 1690 aa23.41■■□□□ 1.34
MRPL38-206ENST00000474548 TTC21AQ8NDW8 1320 aa23.41■■□□□ 1.34
MRPL38-206ENST00000474548 NSD2O96028 1365 aa23.4■■□□□ 1.34
MRPL38-206ENST00000474548 CARD14Q9BXL6 1004 aa23.4■■□□□ 1.34
MRPL38-206ENST00000474548 ANP32CO43423 234 aa23.38■■□□□ 1.33
MRPL38-206ENST00000474548 BRINP3Q76B58 766 aa23.38■■□□□ 1.33
MRPL38-206ENST00000474548 USP6P35125 1406 aa23.38■■□□□ 1.33
MRPL38-206ENST00000474548 NSD3Q9BZ95 1437 aa23.36■■□□□ 1.33
MRPL38-206ENST00000474548 FOXO3O43524 673 aa23.36■■□□□ 1.33
MRPL38-206ENST00000474548 AMER1Q5JTC6 1135 aaPredicted RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms