RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 POTEAQ6S8J7 498 aa13.14□□□□□ -0.31
TNFRSF9-202ENST00000474475 SHPRHQ149N8 1683 aa13.13□□□□□ -0.31
TNFRSF9-202ENST00000474475 MPHOSPH9Q99550 1183 aa13.13□□□□□ -0.31
TNFRSF9-202ENST00000474475 LRP6O75581 1613 aa13.13□□□□□ -0.31
TNFRSF9-202ENST00000474475 NHSL1Q5SYE7 1610 aa13.12□□□□□ -0.31
TNFRSF9-202ENST00000474475 CCDC144AA2RUR9 1427 aa13.12□□□□□ -0.31
TNFRSF9-202ENST00000474475 PTCH1Q13635 1447 aa13.12□□□□□ -0.31
TNFRSF9-202ENST00000474475 PRAG1Q86YV5 1406 aa13.12□□□□□ -0.31
TNFRSF9-202ENST00000474475 ROBO2Q9HCK4 1378 aa13.11□□□□□ -0.31
TNFRSF9-202ENST00000474475 SPATA31E1Q6ZUB1 1445 aa13.11□□□□□ -0.31
TNFRSF9-202ENST00000474475 SPATA31A6Q5VVP1 1343 aa13.11□□□□□ -0.31
TNFRSF9-202ENST00000474475 IFT172Q9UG01 1749 aa13.1□□□□□ -0.31
TNFRSF9-202ENST00000474475 ADGRF5Q8IZF2 1346 aa13.09□□□□□ -0.31
TNFRSF9-202ENST00000474475 SETD5Q9C0A6 1442 aa13.08□□□□□ -0.32
TNFRSF9-202ENST00000474475 RGL3Q3MIN7 710 aa13.08□□□□□ -0.32
TNFRSF9-202ENST00000474475 C1orf167Q5SNV9 1468 aa13.08□□□□□ -0.32
TNFRSF9-202ENST00000474475 DDX17Q92841 729 aaKnown RBP13.07□□□□□ -0.32
TNFRSF9-202ENST00000474475 ANKRD30BQ9BXX2 1392 aa13.06□□□□□ -0.32
TNFRSF9-202ENST00000474475 MEX3CQ5U5Q3 659 aaKnown RBP13.05□□□□□ -0.32
TNFRSF9-202ENST00000474475 LAMC1P11047 1609 aa13.05□□□□□ -0.32
TNFRSF9-202ENST00000474475 NUTM2BA6NNL0 878 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF9-202ENST00000474475 NUTM2EB1AL46 878 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF9-202ENST00000474475 NUTM2AQ8IVF1 878 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF9-202ENST00000474475 ORAI2Q96SN7 254 aa13.04□□□□□ -0.32
TNFRSF9-202ENST00000474475 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
TNFRSF9-202ENST00000474475 PIK3C2GO75747 1445 aa13.04□□□□□ -0.32
TNFRSF9-202ENST00000474475 CDC42BPGQ6DT37 1551 aa13.03□□□□□ -0.32
TNFRSF9-202ENST00000474475 LRRC59Q96AG4 307 aaKnown RBP13.03□□□□□ -0.32
TNFRSF9-202ENST00000474475 ACIN1Q9UKV3 1341 aaKnown RBP13.03□□□□□ -0.32
TNFRSF9-202ENST00000474475 PNPLA6Q8IY17 1366 aa13.03□□□□□ -0.32
TNFRSF9-202ENST00000474475 TECPR2O15040 1411 aa13.03□□□□□ -0.32
TNFRSF9-202ENST00000474475 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.32
TNFRSF9-202ENST00000474475 SPDYE4A6NLX3 237 aa13.02□□□□□ -0.33
TNFRSF9-202ENST00000474475 TMEM132EQ6IEE7 984 aa13.02□□□□□ -0.33
TNFRSF9-202ENST00000474475 STK26Q9P289 416 aa13.02□□□□□ -0.33
TNFRSF9-202ENST00000474475 LRPPRCP42704 1394 aaKnown RBP13.02□□□□□ -0.33
TNFRSF9-202ENST00000474475 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF9-202ENST00000474475 NRXN1Q9ULB1 1477 aa13□□□□□ -0.33
TNFRSF9-202ENST00000474475 ABCC11Q96J66 1382 aa13□□□□□ -0.33
TNFRSF9-202ENST00000474475 PLEKHH1Q9ULM0 1364 aa13□□□□□ -0.33
TNFRSF9-202ENST00000474475 SOS2Q07890 1332 aaPredicted RBP13□□□□□ -0.33
TNFRSF9-202ENST00000474475 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
TNFRSF9-202ENST00000474475 MYOM2P54296 1465 aa12.99□□□□□ -0.33
TNFRSF9-202ENST00000474475 YTHDC2Q9H6S0 1430 aaKnown RBP12.99□□□□□ -0.33
TNFRSF9-202ENST00000474475 AFF2P51816 1311 aa12.98□□□□□ -0.33
TNFRSF9-202ENST00000474475 C14orf93Q9H972 538 aaKnown RBP12.98□□□□□ -0.33
TNFRSF9-202ENST00000474475 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.33
TNFRSF9-202ENST00000474475 COL22A1Q8NFW1 1626 aaPredicted RBP12.96□□□□□ -0.33
TNFRSF9-202ENST00000474475 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.33
TNFRSF9-202ENST00000474475 CFAP70Q5T0N1 1121 aa12.96□□□□□ -0.33
TNFRSF9-202ENST00000474475 C8orf37Q96NL8 207 aa12.96□□□□□ -0.33
TNFRSF9-202ENST00000474475 PXDNQ92626 1479 aa12.96□□□□□ -0.34
TNFRSF9-202ENST00000474475 NUTM2FA1L443 756 aa12.95□□□□□ -0.34
TNFRSF9-202ENST00000474475 ADAMTS2O95450 1211 aa12.94□□□□□ -0.34
TNFRSF9-202ENST00000474475 RXRBP28702 533 aa12.94□□□□□ -0.34
TNFRSF9-202ENST00000474475 SIRT1Q96EB6 747 aa12.94□□□□□ -0.34
TNFRSF9-202ENST00000474475 NPHP3Q7Z494 1330 aa12.93□□□□□ -0.34
TNFRSF9-202ENST00000474475 FOXO3O43524 673 aa12.93□□□□□ -0.34
TNFRSF9-202ENST00000474475 XPCQ01831 940 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF9-202ENST00000474475 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
TNFRSF9-202ENST00000474475 CDK12Q9NYV4 1490 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF9-202ENST00000474475 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
TNFRSF9-202ENST00000474475 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
TNFRSF9-202ENST00000474475 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
TNFRSF9-202ENST00000474475 SPDYE2Q495Y8 402 aa12.92□□□□□ -0.34
TNFRSF9-202ENST00000474475 NGLY1Q96IV0 654 aa12.92□□□□□ -0.34
TNFRSF9-202ENST00000474475 KIF1AQ12756 1690 aa12.92□□□□□ -0.34
TNFRSF9-202ENST00000474475 HRCP23327 699 aa12.91□□□□□ -0.34
TNFRSF9-202ENST00000474475 QTRT2Q9H974 415 aaKnown RBP12.91□□□□□ -0.34
TNFRSF9-202ENST00000474475 RGPD8O14715 1765 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF9-202ENST00000474475 DLC1Q96QB1 1528 aa12.9□□□□□ -0.34
TNFRSF9-202ENST00000474475 PRAM1Q96QH2 718 aa12.9□□□□□ -0.34
TNFRSF9-202ENST00000474475 RGS12O14924 1447 aa12.89□□□□□ -0.35
TNFRSF9-202ENST00000474475 MARF1Q9Y4F3 1742 aaKnown RBP12.89□□□□□ -0.35
TNFRSF9-202ENST00000474475 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
TNFRSF9-202ENST00000474475 SAFB2Q14151 953 aaKnown RBP eCLIP12.89□□□□□ -0.35
TNFRSF9-202ENST00000474475 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
TNFRSF9-202ENST00000474475 DCAF11Q8TEB1 546 aa12.88□□□□□ -0.35
TNFRSF9-202ENST00000474475 UPF1Q92900 1129 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFRSF9-202ENST00000474475 ZNF692Q9BU19 519 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF9-202ENST00000474475 USP32Q8NFA0 1604 aa12.88□□□□□ -0.35
TNFRSF9-202ENST00000474475 ADGRB2O60241 1585 aa12.87□□□□□ -0.35
TNFRSF9-202ENST00000474475 FNBP4Q8N3X1 1017 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF9-202ENST00000474475 USP21Q9UK80 565 aa12.87□□□□□ -0.35
TNFRSF9-202ENST00000474475 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
TNFRSF9-202ENST00000474475 KRT28Q7Z3Y7 464 aa12.86□□□□□ -0.35
TNFRSF9-202ENST00000474475 POGKQ9P215 609 aa12.86□□□□□ -0.35
TNFRSF9-202ENST00000474475 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
TNFRSF9-202ENST00000474475 TRAK1Q9UPV9 953 aa12.85□□□□□ -0.35
TNFRSF9-202ENST00000474475 ATRNO75882 1429 aa12.85□□□□□ -0.35
TNFRSF9-202ENST00000474475 BCL9LQ86UU0 1499 aa12.85□□□□□ -0.35
TNFRSF9-202ENST00000474475 TRPC5Q9UL62 973 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF9-202ENST00000474475 ANKARQ7Z5J8 1434 aa12.84□□□□□ -0.35
TNFRSF9-202ENST00000474475 TNS3Q68CZ2 1445 aa12.83□□□□□ -0.36
TNFRSF9-202ENST00000474475 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
TNFRSF9-202ENST00000474475 RBM42Q9BTD8 480 aaKnown RBP12.83□□□□□ -0.36
TNFRSF9-202ENST00000474475 HIRIP3Q9BW71 556 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF9-202ENST00000474475 MINK1Q8N4C8 1332 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF9-202ENST00000474475 ARHGEF28Q8N1W1 1705 aaKnown RBP12.82□□□□□ -0.36
TNFRSF9-202ENST00000474475 SBNO1A3KN83 1393 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms