RNA–Protein interactions for RNA: ENST00000474336.5

PKNOX1-205, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-205ENST00000474336 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
PKNOX1-205ENST00000474336 EYA1Q99502 592 aa11.88□□□□□ -0.51
PKNOX1-205ENST00000474336 CARMIL2Q6F5E8 1435 aa11.87□□□□□ -0.51
PKNOX1-205ENST00000474336 DISP1Q96F81 1524 aa11.87□□□□□ -0.51
PKNOX1-205ENST00000474336 PCDHB3Q9Y5E6 796 aa11.87□□□□□ -0.51
PKNOX1-205ENST00000474336 CFAP43Q8NDM7 1665 aa11.87□□□□□ -0.51
PKNOX1-205ENST00000474336 TTBK1Q5TCY1 1321 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-205ENST00000474336 LRRIQ1Q96JM4 1722 aa11.86□□□□□ -0.51
PKNOX1-205ENST00000474336 ZNF775Q96BV0 537 aaPredicted RBP11.86□□□□□ -0.51
PKNOX1-205ENST00000474336 SLC19A1P41440 591 aa11.85□□□□□ -0.51
PKNOX1-205ENST00000474336 HECW1Q76N89 1606 aa11.85□□□□□ -0.51
PKNOX1-205ENST00000474336 FMN1Q68DA7 1419 aa11.85□□□□□ -0.51
PKNOX1-205ENST00000474336 RNF223E7ERA6 249 aa11.84□□□□□ -0.51
PKNOX1-205ENST00000474336 TRIM67Q6ZTA4 783 aa11.84□□□□□ -0.51
PKNOX1-205ENST00000474336 PRG4Q92954 1404 aaPredicted RBP11.84□□□□□ -0.51
PKNOX1-205ENST00000474336 RAPGEF6Q8TEU7 1601 aa11.83□□□□□ -0.52
PKNOX1-205ENST00000474336 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
PKNOX1-205ENST00000474336 FYCO1Q9BQS8 1478 aa11.83□□□□□ -0.52
PKNOX1-205ENST00000474336 BLOC1S3Q6QNY0 202 aa11.82□□□□□ -0.52
PKNOX1-205ENST00000474336 ATP1B4Q9UN42 357 aaPredicted RBP11.82□□□□□ -0.52
PKNOX1-205ENST00000474336 EMID1Q96A84 441 aaPredicted RBP11.81□□□□□ -0.52
PKNOX1-205ENST00000474336 PKDCCQ504Y2 493 aa11.8□□□□□ -0.52
PKNOX1-205ENST00000474336 SPRYD7Q5W111 196 aa11.8□□□□□ -0.52
PKNOX1-205ENST00000474336 CFAP44Q96MT7 982 aa11.8□□□□□ -0.52
PKNOX1-205ENST00000474336 TIAM1Q13009 1591 aa11.79□□□□□ -0.52
PKNOX1-205ENST00000474336 ZNF598Q86UK7 904 aaKnown RBP11.79□□□□□ -0.52
PKNOX1-205ENST00000474336 CASKIN1Q8WXD9 1431 aa11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 DGAT1O75907 488 aa11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 DNAJB2P25686 324 aa11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 PRR20EP86478 221 aa11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 PRR20CP86479 221 aa11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 PRR20DP86480 221 aa11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 PRR20BP86481 221 aa11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 PRR20AP86496 221 aa11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 PPARGC1BQ86YN6 1023 aaKnown RBP11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 ANKLE1Q8NAG6 615 aa11.78□□□□□ -0.52
PKNOX1-205ENST00000474336 MYT1Q01538 1121 aa11.77□□□□□ -0.53
PKNOX1-205ENST00000474336 TLL1O43897 1013 aa11.75□□□□□ -0.53
PKNOX1-205ENST00000474336 CCDC18Q5T9S5 1454 aa11.75□□□□□ -0.53
PKNOX1-205ENST00000474336 PLB1Q6P1J6 1458 aa11.75□□□□□ -0.53
PKNOX1-205ENST00000474336 ACTN4O43707 911 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-205ENST00000474336 KMT5BQ4FZB7 885 aa11.74□□□□□ -0.53
PKNOX1-205ENST00000474336 RBM46Q8TBY0 533 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-205ENST00000474336 TMEM134Q9H6X4 195 aa11.74□□□□□ -0.53
PKNOX1-205ENST00000474336 ABCA8O94911 1581 aa11.74□□□□□ -0.53
PKNOX1-205ENST00000474336 PPEF1O14829 653 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-205ENST00000474336 S1PR4O95977 384 aa11.73□□□□□ -0.53
PKNOX1-205ENST00000474336 PTPRGP23470 1445 aa11.73□□□□□ -0.53
PKNOX1-205ENST00000474336 CDK13Q14004 1512 aaKnown RBP11.73□□□□□ -0.53
PKNOX1-205ENST00000474336 LIAT1Q6ZQX7 453 aa11.73□□□□□ -0.53
PKNOX1-205ENST00000474336 ARID3CA6NKF2 412 aa11.72□□□□□ -0.53
PKNOX1-205ENST00000474336 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
PKNOX1-205ENST00000474336 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-205ENST00000474336 MAP3K1Q13233 1512 aa11.71□□□□□ -0.53
PKNOX1-205ENST00000474336 PTGDRQ13258 359 aa11.71□□□□□ -0.53
PKNOX1-205ENST00000474336 RIMBP3CA6NJZ7 1639 aa11.71□□□□□ -0.54
PKNOX1-205ENST00000474336 RIMBP3BA6NNM3 1639 aa11.71□□□□□ -0.54
PKNOX1-205ENST00000474336 RIMBP3Q9UFD9 1639 aa11.71□□□□□ -0.54
PKNOX1-205ENST00000474336 NUP153P49790 1475 aaKnown RBP11.7□□□□□ -0.54
PKNOX1-205ENST00000474336 SUPT6HQ7KZ85 1726 aaKnown RBP11.7□□□□□ -0.54
PKNOX1-205ENST00000474336 MLLT3P42568 568 aaPredicted RBP11.7□□□□□ -0.54
PKNOX1-205ENST00000474336 ADGRG1Q9Y653 693 aa11.7□□□□□ -0.54
PKNOX1-205ENST00000474336 ARHGEF11O15085 1522 aa11.7□□□□□ -0.54
PKNOX1-205ENST00000474336 EHBP1L1Q8N3D4 1523 aa11.7□□□□□ -0.54
PKNOX1-205ENST00000474336 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
PKNOX1-205ENST00000474336 ZCCHC11Q5TAX3 1644 aaKnown RBP11.68□□□□□ -0.54
PKNOX1-205ENST00000474336 FAM187AA6NFU0 413 aa11.68□□□□□ -0.54
PKNOX1-205ENST00000474336 GDF9O60383 454 aa11.68□□□□□ -0.54
PKNOX1-205ENST00000474336 CFHP08603 1231 aa11.68□□□□□ -0.54
PKNOX1-205ENST00000474336 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
PKNOX1-205ENST00000474336 LRRC9Q6ZRR7 1453 aa11.68□□□□□ -0.54
PKNOX1-205ENST00000474336 ADCY10Q96PN6 1610 aa11.68□□□□□ -0.54
PKNOX1-205ENST00000474336 RCCD1A6NED2 376 aa11.67□□□□□ -0.54
PKNOX1-205ENST00000474336 POTECB2RU33 542 aa11.67□□□□□ -0.54
PKNOX1-205ENST00000474336 ADH1BP00325 375 aa11.67□□□□□ -0.54
PKNOX1-205ENST00000474336 UACAQ9BZF9 1416 aa11.67□□□□□ -0.54
PKNOX1-205ENST00000474336 MTUS2Q5JR59 1369 aa11.67□□□□□ -0.54
PKNOX1-205ENST00000474336 NR1I2O75469 434 aa11.66□□□□□ -0.54
PKNOX1-205ENST00000474336 TNFRSF10AO00220 468 aa11.65□□□□□ -0.54
PKNOX1-205ENST00000474336 MAGI3Q5TCQ9 1506 aa11.65□□□□□ -0.55
PKNOX1-205ENST00000474336 KANK4Q5T7N3 995 aaPredicted RBP11.64□□□□□ -0.55
PKNOX1-205ENST00000474336 SLC6A16Q9GZN6 736 aa11.64□□□□□ -0.55
PKNOX1-205ENST00000474336 SLC10A3P09131 477 aa11.63□□□□□ -0.55
PKNOX1-205ENST00000474336 KIF14Q15058 1648 aa11.63□□□□□ -0.55
PKNOX1-205ENST00000474336 ITSN2Q9NZM3 1697 aa11.62□□□□□ -0.55
PKNOX1-205ENST00000474336 FAM161AQ3B820 660 aa11.61□□□□□ -0.55
PKNOX1-205ENST00000474336 UHRF1BP1LA0JNW5 1464 aa11.61□□□□□ -0.55
PKNOX1-205ENST00000474336 ATP10BO94823 1461 aa11.6□□□□□ -0.55
PKNOX1-205ENST00000474336 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.6□□□□□ -0.55
PKNOX1-205ENST00000474336 NUTM2FA1L443 756 aa11.6□□□□□ -0.55
PKNOX1-205ENST00000474336 PLA2G2CQ5R387 149 aa11.6□□□□□ -0.55
PKNOX1-205ENST00000474336 TRIM26Q12899 539 aaPredicted RBP11.59□□□□□ -0.55
PKNOX1-205ENST00000474336 SCUBE3Q8IX30 993 aa11.59□□□□□ -0.55
PKNOX1-205ENST00000474336 AAASQ9NRG9 546 aa11.59□□□□□ -0.55
PKNOX1-205ENST00000474336 CDK11AQ9UQ88 783 aaPredicted RBP11.59□□□□□ -0.55
PKNOX1-205ENST00000474336 NCOA2Q15596 1464 aa11.58□□□□□ -0.56
PKNOX1-205ENST00000474336 CDC42BPAQ5VT25 1732 aa11.58□□□□□ -0.56
PKNOX1-205ENST00000474336 MYO5CQ9NQX4 1742 aa11.57□□□□□ -0.56
PKNOX1-205ENST00000474336 KDM5BQ9UGL1 1544 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms