RNA–Protein interactions for RNA: ENST00000474251.5

PDE6B-208, Transcript of phosphodiesterase 6B, humanhuman

TSL 4

Gene PDE6B, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-208ENST00000474251 PIK3C2GO75747 1445 aa26.97■■□□□ 1.91
PDE6B-208ENST00000474251 FMN2Q9NZ56 1722 aa26.96■■□□□ 1.91
PDE6B-208ENST00000474251 SOS2Q07890 1332 aaPredicted RBP26.96■■□□□ 1.91
PDE6B-208ENST00000474251 RGL3Q3MIN7 710 aa26.94■■□□□ 1.9
PDE6B-208ENST00000474251 RXRBP28702 533 aa26.93■■□□□ 1.9
PDE6B-208ENST00000474251 RGPD8O14715 1765 aaPredicted RBP26.93■■□□□ 1.9
PDE6B-208ENST00000474251 LRPPRCP42704 1394 aaKnown RBP26.92■■□□□ 1.9
PDE6B-208ENST00000474251 C8orf37Q96NL8 207 aa26.91■■□□□ 1.9
PDE6B-208ENST00000474251 PXDNQ92626 1479 aa26.9■■□□□ 1.9
PDE6B-208ENST00000474251 KIF1AQ12756 1690 aa26.89■■□□□ 1.89
PDE6B-208ENST00000474251 ABCC11Q96J66 1382 aa26.88■■□□□ 1.89
PDE6B-208ENST00000474251 NRXN1Q9ULB1 1477 aa26.87■■□□□ 1.89
PDE6B-208ENST00000474251 RGS12O14924 1447 aa26.87■■□□□ 1.89
PDE6B-208ENST00000474251 MYOM2P54296 1465 aa26.87■■□□□ 1.89
PDE6B-208ENST00000474251 PLEKHH1Q9ULM0 1364 aa26.86■■□□□ 1.89
PDE6B-208ENST00000474251 UPF1Q92900 1129 aaKnown RBP eCLIP26.86■■□□□ 1.89
PDE6B-208ENST00000474251 YTHDC2Q9H6S0 1430 aaKnown RBP26.86■■□□□ 1.89
PDE6B-208ENST00000474251 STK26Q9P289 416 aa26.86■■□□□ 1.89
PDE6B-208ENST00000474251 ACIN1Q9UKV3 1341 aaKnown RBP26.85■■□□□ 1.89
PDE6B-208ENST00000474251 ADAMTS2O95450 1211 aa26.84■■□□□ 1.89
PDE6B-208ENST00000474251 TMEM132EQ6IEE7 984 aa26.84■■□□□ 1.89
PDE6B-208ENST00000474251 WAPLQ7Z5K2 1190 aa26.84■■□□□ 1.89
PDE6B-208ENST00000474251 NPHP3Q7Z494 1330 aa26.84■■□□□ 1.89
PDE6B-208ENST00000474251 ESCO1Q5FWF5 840 aa26.82■■□□□ 1.88
PDE6B-208ENST00000474251 QTRT2Q9H974 415 aaKnown RBP26.81■■□□□ 1.88
PDE6B-208ENST00000474251 RBM6P78332 1123 aaKnown RBP26.8■■□□□ 1.88
PDE6B-208ENST00000474251 NGLY1Q96IV0 654 aa26.8■■□□□ 1.88
PDE6B-208ENST00000474251 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.79■■□□□ 1.88
PDE6B-208ENST00000474251 RAB3GAP2Q9H2M9 1393 aa26.79■■□□□ 1.88
PDE6B-208ENST00000474251 NUTM2FA1L443 756 aa26.76■■□□□ 1.87
PDE6B-208ENST00000474251 C14orf93Q9H972 538 aaKnown RBP26.76■■□□□ 1.87
PDE6B-208ENST00000474251 FOXO3O43524 673 aa26.75■■□□□ 1.87
PDE6B-208ENST00000474251 ATRNO75882 1429 aa26.74■■□□□ 1.87
PDE6B-208ENST00000474251 ABCA3Q99758 1704 aa26.74■■□□□ 1.87
PDE6B-208ENST00000474251 XPCQ01831 940 aaPredicted RBP26.74■■□□□ 1.87
PDE6B-208ENST00000474251 DLC1Q96QB1 1528 aa26.74■■□□□ 1.87
PDE6B-208ENST00000474251 FNBP4Q8N3X1 1017 aaPredicted RBP26.73■■□□□ 1.87
PDE6B-208ENST00000474251 SIRT1Q96EB6 747 aa26.73■■□□□ 1.87
PDE6B-208ENST00000474251 USP21Q9UK80 565 aa26.73■■□□□ 1.87
PDE6B-208ENST00000474251 USP32Q8NFA0 1604 aa26.72■■□□□ 1.87
PDE6B-208ENST00000474251 ADGRB2O60241 1585 aa26.72■■□□□ 1.87
PDE6B-208ENST00000474251 DHX57Q6P158 1386 aaKnown RBP26.71■■□□□ 1.87
PDE6B-208ENST00000474251 ADGRB1O14514 1584 aa26.71■■□□□ 1.87
PDE6B-208ENST00000474251 CFAP70Q5T0N1 1121 aa26.71■■□□□ 1.87
PDE6B-208ENST00000474251 TRPC5Q9UL62 973 aaPredicted RBP26.7■■□□□ 1.86
PDE6B-208ENST00000474251 BCL9LQ86UU0 1499 aa26.68■■□□□ 1.86
PDE6B-208ENST00000474251 PLCH1Q4KWH8 1693 aa26.66■■□□□ 1.86
PDE6B-208ENST00000474251 SPATA31A3Q5VYP0 1347 aa26.65■■□□□ 1.86
PDE6B-208ENST00000474251 TNS3Q68CZ2 1445 aa26.64■■□□□ 1.85
PDE6B-208ENST00000474251 ARHGEF28Q8N1W1 1705 aaKnown RBP26.63■■□□□ 1.85
PDE6B-208ENST00000474251 TRPM3Q9HCF6 1732 aaPredicted RBP26.63■■□□□ 1.85
PDE6B-208ENST00000474251 NWD2Q9ULI1 1742 aa26.63■■□□□ 1.85
PDE6B-208ENST00000474251 BRWD3Q6RI45 1802 aa26.62■■□□□ 1.85
PDE6B-208ENST00000474251 EP400Q96L91 3159 aa26.62■■□□□ 1.85
PDE6B-208ENST00000474251 PRAM1Q96QH2 718 aa26.62■■□□□ 1.85
PDE6B-208ENST00000474251 GLI3P10071 1580 aa26.62■■□□□ 1.85
PDE6B-208ENST00000474251 ATAD2Q6PL18 1390 aa26.61■■□□□ 1.85
PDE6B-208ENST00000474251 SLIT2O94813 1529 aa26.61■■□□□ 1.85
PDE6B-208ENST00000474251 ANKARQ7Z5J8 1434 aa26.6■■□□□ 1.85
PDE6B-208ENST00000474251 SAFB2Q14151 953 aaKnown RBP eCLIP26.6■■□□□ 1.85
PDE6B-208ENST00000474251 PHF8Q9UPP1 1060 aa26.6■■□□□ 1.85
PDE6B-208ENST00000474251 KRT28Q7Z3Y7 464 aa26.59■■□□□ 1.85
PDE6B-208ENST00000474251 ALS2Q96Q42 1657 aa26.58■■□□□ 1.85
PDE6B-208ENST00000474251 ITSN1Q15811 1721 aa26.56■■□□□ 1.84
PDE6B-208ENST00000474251 SBNO1A3KN83 1393 aa26.56■■□□□ 1.84
PDE6B-208ENST00000474251 CRYBG1Q9Y4K1 1723 aa26.55■■□□□ 1.84
PDE6B-208ENST00000474251 TULP4Q9NRJ4 1543 aa26.55■■□□□ 1.84
PDE6B-208ENST00000474251 POGKQ9P215 609 aa26.54■■□□□ 1.84
PDE6B-208ENST00000474251 RALGAPBQ86X10 1494 aa26.53■■□□□ 1.84
PDE6B-208ENST00000474251 NRAPQ86VF7 1730 aa26.53■■□□□ 1.84
PDE6B-208ENST00000474251 PSME1Q06323 249 aa26.52■■□□□ 1.84
PDE6B-208ENST00000474251 GJD4Q96KN9 370 aaPredicted RBP26.52■■□□□ 1.84
PDE6B-208ENST00000474251 TRAK1Q9UPV9 953 aa26.51■■□□□ 1.83
PDE6B-208ENST00000474251 KIAA1210Q9ULL0 1709 aa26.51■■□□□ 1.83
PDE6B-208ENST00000474251 ARHGEF10O15013 1369 aa26.5■■□□□ 1.83
PDE6B-208ENST00000474251 HRCP23327 699 aa26.5■■□□□ 1.83
PDE6B-208ENST00000474251 UNC5CLQ8IV45 518 aa26.5■■□□□ 1.83
PDE6B-208ENST00000474251 DCAF11Q8TEB1 546 aa26.5■■□□□ 1.83
PDE6B-208ENST00000474251 KDM2AQ9Y2K7 1162 aa26.5■■□□□ 1.83
PDE6B-208ENST00000474251 EIF3AQ14152 1382 aaKnown RBP26.47■■□□□ 1.83
PDE6B-208ENST00000474251 PMFBP1Q8TBY8 1022 aa26.47■■□□□ 1.83
PDE6B-208ENST00000474251 CABLES1Q8TDN4 633 aa26.47■■□□□ 1.83
PDE6B-208ENST00000474251 HIRIP3Q9BW71 556 aaPredicted RBP26.47■■□□□ 1.83
PDE6B-208ENST00000474251 MINK1Q8N4C8 1332 aaPredicted RBP26.46■■□□□ 1.83
PDE6B-208ENST00000474251 PRR36Q9H6K5 1346 aa26.46■■□□□ 1.83
PDE6B-208ENST00000474251 STAC3Q96MF2 364 aa26.46■■□□□ 1.83
PDE6B-208ENST00000474251 TOPAZ1Q8N9V7 1692 aa26.45■■□□□ 1.82
PDE6B-208ENST00000474251 HAP1P54257 671 aaPredicted RBP26.45■■□□□ 1.82
PDE6B-208ENST00000474251 COL14A1Q05707 1796 aaKnown RBP26.45■■□□□ 1.82
PDE6B-208ENST00000474251 LMOD2Q6P5Q4 547 aa26.42■■□□□ 1.82
PDE6B-208ENST00000474251 ATP7BP35670 1465 aa26.42■■□□□ 1.82
PDE6B-208ENST00000474251 WASLO00401 505 aaPredicted RBP26.41■■□□□ 1.82
PDE6B-208ENST00000474251 PLEKHG5O94827 1062 aa26.41■■□□□ 1.82
PDE6B-208ENST00000474251 PHRF1Q9P1Y6 1649 aaKnown RBP26.39■■□□□ 1.82
PDE6B-208ENST00000474251 GPRASP1Q5JY77 1395 aa26.39■■□□□ 1.82
PDE6B-208ENST00000474251 VPS72Q15906 364 aa26.39■■□□□ 1.82
PDE6B-208ENST00000474251 CCDC125Q86Z20 511 aa26.36■■□□□ 1.81
PDE6B-208ENST00000474251 FAM83GA6ND36 823 aa26.34■■□□□ 1.81
PDE6B-208ENST00000474251 BLMP54132 1417 aaPredicted RBP26.33■■□□□ 1.81
PDE6B-208ENST00000474251 SEPT12Q8IYM1 358 aa26.32■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms