RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 LRPPRCP42704 1394 aaKnown RBP36.84■■■■□ 3.49
PKD1-211ENST00000474088 TMEM132EQ6IEE7 984 aa36.84■■■■□ 3.49
PKD1-211ENST00000474088 TECPR2O15040 1411 aa36.84■■■■□ 3.49
PKD1-211ENST00000474088 WAPLQ7Z5K2 1190 aa36.83■■■■□ 3.49
PKD1-211ENST00000474088 ABCC11Q96J66 1382 aa36.82■■■■□ 3.49
PKD1-211ENST00000474088 ESCO1Q5FWF5 840 aa36.82■■■■□ 3.48
PKD1-211ENST00000474088 CDC42BPGQ6DT37 1551 aa36.82■■■■□ 3.48
PKD1-211ENST00000474088 PIK3C2GO75747 1445 aa36.81■■■■□ 3.48
PKD1-211ENST00000474088 CDK12Q9NYV4 1490 aaPredicted RBP36.81■■■■□ 3.48
PKD1-211ENST00000474088 ADAMTS2O95450 1211 aa36.8■■■■□ 3.48
PKD1-211ENST00000474088 QTRT2Q9H974 415 aaKnown RBP36.8■■■■□ 3.48
PKD1-211ENST00000474088 UPF1Q92900 1129 aaKnown RBP eCLIP36.79■■■■□ 3.48
PKD1-211ENST00000474088 NGLY1Q96IV0 654 aa36.78■■■■□ 3.48
PKD1-211ENST00000474088 NPHP3Q7Z494 1330 aa36.77■■■■□ 3.48
PKD1-211ENST00000474088 RBM6P78332 1123 aaKnown RBP36.74■■■■□ 3.47
PKD1-211ENST00000474088 PLEKHH1Q9ULM0 1364 aa36.74■■■■□ 3.47
PKD1-211ENST00000474088 C14orf93Q9H972 538 aaKnown RBP36.73■■■■□ 3.47
PKD1-211ENST00000474088 YTHDC2Q9H6S0 1430 aaKnown RBP36.72■■■■□ 3.47
PKD1-211ENST00000474088 KNDC1Q76NI1 1749 aa36.71■■■■□ 3.47
PKD1-211ENST00000474088 NUTM2FA1L443 756 aa36.71■■■■□ 3.47
PKD1-211ENST00000474088 FOXO3O43524 673 aa36.71■■■■□ 3.47
PKD1-211ENST00000474088 SIRT1Q96EB6 747 aa36.7■■■■□ 3.47
PKD1-211ENST00000474088 PXDNQ92626 1479 aa36.68■■■■□ 3.46
PKD1-211ENST00000474088 RAB3GAP2Q9H2M9 1393 aa36.67■■■■□ 3.46
PKD1-211ENST00000474088 COL22A1Q8NFW1 1626 aaPredicted RBP36.67■■■■□ 3.46
PKD1-211ENST00000474088 XPCQ01831 940 aaPredicted RBP36.66■■■■□ 3.46
PKD1-211ENST00000474088 CFAP70Q5T0N1 1121 aa36.66■■■■□ 3.46
PKD1-211ENST00000474088 USP21Q9UK80 565 aa36.66■■■■□ 3.46
PKD1-211ENST00000474088 NRXN1Q9ULB1 1477 aa36.65■■■■□ 3.46
PKD1-211ENST00000474088 FNBP4Q8N3X1 1017 aaPredicted RBP36.64■■■■□ 3.46
PKD1-211ENST00000474088 RGS12O14924 1447 aa36.64■■■■□ 3.46
PKD1-211ENST00000474088 DHX57Q6P158 1386 aaKnown RBP36.63■■■■□ 3.45
PKD1-211ENST00000474088 MYOM2P54296 1465 aa36.62■■■■□ 3.45
PKD1-211ENST00000474088 TRPC5Q9UL62 973 aaPredicted RBP36.59■■■■□ 3.45
PKD1-211ENST00000474088 FMN2Q9NZ56 1722 aa36.59■■■■□ 3.45
PKD1-211ENST00000474088 PRAM1Q96QH2 718 aa36.52■■■■□ 3.44
PKD1-211ENST00000474088 SPATA31A3Q5VYP0 1347 aa36.52■■■■□ 3.44
PKD1-211ENST00000474088 KRT28Q7Z3Y7 464 aa36.51■■■■□ 3.44
PKD1-211ENST00000474088 KIF1AQ12756 1690 aa36.51■■■■□ 3.43
PKD1-211ENST00000474088 ATRNO75882 1429 aa36.51■■■■□ 3.43
PKD1-211ENST00000474088 SAFB2Q14151 953 aaKnown RBP eCLIP36.49■■■■□ 3.43
PKD1-211ENST00000474088 PHF8Q9UPP1 1060 aa36.49■■■■□ 3.43
PKD1-211ENST00000474088 BCL9LQ86UU0 1499 aa36.48■■■■□ 3.43
PKD1-211ENST00000474088 POGKQ9P215 609 aa36.46■■■■□ 3.43
PKD1-211ENST00000474088 MARF1Q9Y4F3 1742 aaKnown RBP36.45■■■■□ 3.43
PKD1-211ENST00000474088 DLC1Q96QB1 1528 aa36.44■■■■□ 3.42
PKD1-211ENST00000474088 HRCP23327 699 aa36.43■■■■□ 3.42
PKD1-211ENST00000474088 RGPD8O14715 1765 aaPredicted RBP36.43■■■■□ 3.42
PKD1-211ENST00000474088 PSME1Q06323 249 aa36.42■■■■□ 3.42
PKD1-211ENST00000474088 KDM2AQ9Y2K7 1162 aa36.42■■■■□ 3.42
PKD1-211ENST00000474088 DCAF11Q8TEB1 546 aa36.4■■■■□ 3.42
PKD1-211ENST00000474088 ADGRB1O14514 1584 aa36.4■■■■□ 3.42
PKD1-211ENST00000474088 TRAK1Q9UPV9 953 aa36.39■■■■□ 3.42
PKD1-211ENST00000474088 ATAD2Q6PL18 1390 aa36.39■■■■□ 3.42
PKD1-211ENST00000474088 GJD4Q96KN9 370 aaPredicted RBP36.37■■■■□ 3.41
PKD1-211ENST00000474088 STAC3Q96MF2 364 aa36.37■■■■□ 3.41
PKD1-211ENST00000474088 TNS3Q68CZ2 1445 aa36.36■■■■□ 3.41
PKD1-211ENST00000474088 UNC5CLQ8IV45 518 aa36.34■■■■□ 3.41
PKD1-211ENST00000474088 SBNO1A3KN83 1393 aa36.34■■■■□ 3.41
PKD1-211ENST00000474088 ANKARQ7Z5J8 1434 aa36.34■■■■□ 3.41
PKD1-211ENST00000474088 SLIT2O94813 1529 aa36.33■■■■□ 3.41
PKD1-211ENST00000474088 PMFBP1Q8TBY8 1022 aa36.32■■■■□ 3.4
PKD1-211ENST00000474088 HAP1P54257 671 aaPredicted RBP36.31■■■■□ 3.4
PKD1-211ENST00000474088 CABLES1Q8TDN4 633 aa36.31■■■■□ 3.4
PKD1-211ENST00000474088 HIRIP3Q9BW71 556 aaPredicted RBP36.31■■■■□ 3.4
PKD1-211ENST00000474088 ADGRB2O60241 1585 aa36.31■■■■□ 3.4
PKD1-211ENST00000474088 USP32Q8NFA0 1604 aa36.3■■■■□ 3.4
PKD1-211ENST00000474088 LMOD2Q6P5Q4 547 aa36.29■■■■□ 3.4
PKD1-211ENST00000474088 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.28■■■■□ 3.4
PKD1-211ENST00000474088 MINK1Q8N4C8 1332 aaPredicted RBP36.28■■■■□ 3.4
PKD1-211ENST00000474088 PLEKHG5O94827 1062 aa36.26■■■■□ 3.4
PKD1-211ENST00000474088 ARHGEF10O15013 1369 aa36.26■■■■□ 3.39
PKD1-211ENST00000474088 WASLO00401 505 aaPredicted RBP36.23■■■■□ 3.39
PKD1-211ENST00000474088 PRR36Q9H6K5 1346 aa36.22■■■■□ 3.39
PKD1-211ENST00000474088 EIF3AQ14152 1382 aaKnown RBP36.22■■■■□ 3.39
PKD1-211ENST00000474088 RALGAPBQ86X10 1494 aa36.22■■■■□ 3.39
PKD1-211ENST00000474088 GLI3P10071 1580 aa36.2■■■■□ 3.39
PKD1-211ENST00000474088 TULP4Q9NRJ4 1543 aa36.18■■■■□ 3.38
PKD1-211ENST00000474088 GPRASP1Q5JY77 1395 aa36.17■■■■□ 3.38
PKD1-211ENST00000474088 CCDC125Q86Z20 511 aa36.17■■■■□ 3.38
PKD1-211ENST00000474088 VPS72Q15906 364 aa36.16■■■■□ 3.38
PKD1-211ENST00000474088 ABCA3Q99758 1704 aa36.14■■■■□ 3.38
PKD1-211ENST00000474088 FAM83GA6ND36 823 aa36.14■■■■□ 3.38
PKD1-211ENST00000474088 TRPM3Q9HCF6 1732 aaPredicted RBP36.14■■■■□ 3.38
PKD1-211ENST00000474088 NGDNQ8NEJ9 315 aaKnown RBP36.11■■■■□ 3.37
PKD1-211ENST00000474088 NWD2Q9ULI1 1742 aa36.11■■■■□ 3.37
PKD1-211ENST00000474088 PLCH1Q4KWH8 1693 aa36.1■■■■□ 3.37
PKD1-211ENST00000474088 CCDC9Q9Y3X0 531 aaKnown RBP36.1■■■■□ 3.37
PKD1-211ENST00000474088 SEPT12Q8IYM1 358 aa36.09■■■■□ 3.37
PKD1-211ENST00000474088 ARHGEF28Q8N1W1 1705 aaKnown RBP36.08■■■■□ 3.37
PKD1-211ENST00000474088 ONECUT3O60422 494 aaPredicted RBP36.08■■■■□ 3.37
PKD1-211ENST00000474088 ALS2Q96Q42 1657 aa36.07■■■■□ 3.37
PKD1-211ENST00000474088 NUDT16Q96DE0 195 aaKnown RBP36.06■■■■□ 3.36
PKD1-211ENST00000474088 PAK3O75914 559 aaPredicted RBP36.04■■■■□ 3.36
PKD1-211ENST00000474088 CDK19Q9BWU1 502 aa36.02■■■■□ 3.36
PKD1-211ENST00000474088 BTG4Q9NY30 223 aa36.02■■■■□ 3.36
PKD1-211ENST00000474088 ATP7BP35670 1465 aa36.01■■■■□ 3.36
PKD1-211ENST00000474088 ZRANB1Q9UGI0 708 aa36.01■■■■□ 3.36
PKD1-211ENST00000474088 BRWD3Q6RI45 1802 aa36.01■■■■□ 3.35
PKD1-211ENST00000474088 BLMP54132 1417 aaPredicted RBP35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms