RNA–Protein interactions for RNA: ENST00000474064.5

RNF220-209, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 2,734 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-209ENST00000474064 WDR43Q15061 677 aaKnown RBP eCLIP28.04■■■□□ 2.08
RNF220-209ENST00000474064 SPATA31D1Q6ZQQ2 1576 aa28.03■■■□□ 2.08
RNF220-209ENST00000474064 NSD3Q9BZ95 1437 aa28.02■■■□□ 2.08
RNF220-209ENST00000474064 PRAM1Q96QH2 718 aa28.02■■■□□ 2.08
RNF220-209ENST00000474064 A2ML1A8K2U0 1454 aa28.02■■■□□ 2.08
RNF220-209ENST00000474064 MINK1Q8N4C8 1332 aaPredicted RBP28.01■■■□□ 2.07
RNF220-209ENST00000474064 POGKQ9P215 609 aa28.01■■■□□ 2.07
RNF220-209ENST00000474064 TULP4Q9NRJ4 1543 aa28■■■□□ 2.07
RNF220-209ENST00000474064 TNNT2P45379 298 aaPredicted RBP28■■■□□ 2.07
RNF220-209ENST00000474064 BLMP54132 1417 aaPredicted RBP27.99■■■□□ 2.07
RNF220-209ENST00000474064 YTHDC2Q9H6S0 1430 aaKnown RBP27.99■■■□□ 2.07
RNF220-209ENST00000474064 SRPK2P78362 688 aaKnown RBP27.98■■■□□ 2.07
RNF220-209ENST00000474064 RIMS2Q9UQ26 1411 aa27.98■■■□□ 2.07
RNF220-209ENST00000474064 CDCA7LQ96GN5 454 aa27.97■■■□□ 2.07
RNF220-209ENST00000474064 ALKQ9UM73 1620 aa27.97■■■□□ 2.07
RNF220-209ENST00000474064 MORC1Q86VD1 984 aa27.94■■■□□ 2.06
RNF220-209ENST00000474064 PTPRMP28827 1452 aa27.94■■■□□ 2.06
RNF220-209ENST00000474064 TRHP20396 242 aaPredicted RBP27.92■■■□□ 2.06
RNF220-209ENST00000474064 RTL5Q5HYW3 569 aaPredicted RBP27.92■■■□□ 2.06
RNF220-209ENST00000474064 PLPPR3Q6T4P5 718 aa27.92■■■□□ 2.06
RNF220-209ENST00000474064 CCDC146Q8IYE0 955 aa27.91■■■□□ 2.06
RNF220-209ENST00000474064 INSRP06213 1382 aa27.9■■■□□ 2.06
RNF220-209ENST00000474064 PDE3BQ13370 1112 aa27.89■■■□□ 2.05
RNF220-209ENST00000474064 WAPLQ7Z5K2 1190 aa27.89■■■□□ 2.05
RNF220-209ENST00000474064 IPO9Q96P70 1041 aaKnown RBP27.89■■■□□ 2.05
RNF220-209ENST00000474064 PUS7Q96PZ0 661 aaKnown RBP27.89■■■□□ 2.05
RNF220-209ENST00000474064 ANP32AP39687 249 aaKnown RBP27.88■■■□□ 2.05
RNF220-209ENST00000474064 TNRQ92752 1358 aa27.88■■■□□ 2.05
RNF220-209ENST00000474064 CGNL1Q0VF96 1302 aa27.88■■■□□ 2.05
RNF220-209ENST00000474064 CEBPAP49715 358 aaPredicted RBP27.87■■■□□ 2.05
RNF220-209ENST00000474064 ANKRD36BQ8N2N9 1353 aa27.86■■■□□ 2.05
RNF220-209ENST00000474064 RNF123Q5XPI4 1314 aa27.85■■■□□ 2.05
RNF220-209ENST00000474064 IL27Q8NEV9 243 aa27.84■■■□□ 2.05
RNF220-209ENST00000474064 ZBTB47Q9UFB7 747 aaPredicted RBP27.84■■■□□ 2.05
RNF220-209ENST00000474064 CDK19Q9BWU1 502 aa27.83■■■□□ 2.05
RNF220-209ENST00000474064 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.83■■■□□ 2.05
RNF220-209ENST00000474064 RCAN3Q9UKA8 241 aa27.83■■■□□ 2.05
RNF220-209ENST00000474064 A0A1W2PP64 1363 aa27.81■■■□□ 2.04
RNF220-209ENST00000474064 PLEKHH1Q9ULM0 1364 aa27.81■■■□□ 2.04
RNF220-209ENST00000474064 METP08581 1390 aa27.79■■■□□ 2.04
RNF220-209ENST00000474064 ATAD2Q6PL18 1390 aa27.78■■■□□ 2.04
RNF220-209ENST00000474064 APAF1O14727 1248 aa27.77■■■□□ 2.04
RNF220-209ENST00000474064 TXNDC2Q86VQ3 553 aa27.77■■■□□ 2.04
RNF220-209ENST00000474064 RTN4Q9NQC3 1192 aaKnown RBP27.77■■■□□ 2.04
RNF220-209ENST00000474064 MTHFSP49914 203 aa27.77■■■□□ 2.04
RNF220-209ENST00000474064 HDGFP51858 240 aaKnown RBP27.76■■■□□ 2.03
RNF220-209ENST00000474064 GGNBP2Q9H3C7 697 aa27.76■■■□□ 2.03
RNF220-209ENST00000474064 CABP1Q9NZU7 370 aa27.76■■■□□ 2.03
RNF220-209ENST00000474064 POLR3AO14802 1390 aaPredicted RBP27.75■■■□□ 2.03
RNF220-209ENST00000474064 RRP1P56182 461 aaKnown RBP27.75■■■□□ 2.03
RNF220-209ENST00000474064 CCDC136Q96JN2 1154 aa27.75■■■□□ 2.03
RNF220-209ENST00000474064 TERF2IPQ9NYB0 399 aa27.75■■■□□ 2.03
RNF220-209ENST00000474064 NINLQ9Y2I6 1382 aa27.73■■■□□ 2.03
RNF220-209ENST00000474064 NRXN3Q9Y4C0 1643 aa27.73■■■□□ 2.03
RNF220-209ENST00000474064 SETD1AO15047 1707 aaKnown RBP27.73■■■□□ 2.03
RNF220-209ENST00000474064 TMEM2Q9UHN6 1383 aa27.73■■■□□ 2.03
RNF220-209ENST00000474064 USP32Q8NFA0 1604 aa27.72■■■□□ 2.03
RNF220-209ENST00000474064 ABCC11Q96J66 1382 aa27.72■■■□□ 2.03
RNF220-209ENST00000474064 HDGFL2Q7Z4V5 671 aaPredicted RBP27.69■■■□□ 2.02
RNF220-209ENST00000474064 GOLGA2Q08379 1002 aa27.69■■■□□ 2.02
RNF220-209ENST00000474064 ZNF521Q96K83 1311 aa27.68■■■□□ 2.02
RNF220-209ENST00000474064 NSD2O96028 1365 aa27.68■■■□□ 2.02
RNF220-209ENST00000474064 CD163L1Q9NR16 1453 aa27.68■■■□□ 2.02
RNF220-209ENST00000474064 LTKP29376 864 aa27.68■■■□□ 2.02
RNF220-209ENST00000474064 DLC1Q96QB1 1528 aa27.68■■■□□ 2.02
RNF220-209ENST00000474064 UBR1Q8IWV7 1749 aa27.67■■■□□ 2.02
RNF220-209ENST00000474064 CFAP53Q96M91 514 aa27.67■■■□□ 2.02
RNF220-209ENST00000474064 FYB1O15117 783 aa27.67■■■□□ 2.02
RNF220-209ENST00000474064 PLIN1O60240 522 aa27.67■■■□□ 2.02
RNF220-209ENST00000474064 DUSP27Q5VZP5 1158 aa27.65■■■□□ 2.02
RNF220-209ENST00000474064 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.65■■■□□ 2.02
RNF220-209ENST00000474064 NEUROD2Q15784 382 aa27.64■■■□□ 2.01
RNF220-209ENST00000474064 WASLO00401 505 aaPredicted RBP27.62■■■□□ 2.01
RNF220-209ENST00000474064 SPINK5Q9NQ38 1064 aaPredicted RBP27.62■■■□□ 2.01
RNF220-209ENST00000474064 EXOC6Q8TAG9 804 aa27.62■■■□□ 2.01
RNF220-209ENST00000474064 SLC26A8Q96RN1 970 aa27.61■■■□□ 2.01
RNF220-209ENST00000474064 RRP7AQ9Y3A4 280 aaKnown RBP27.61■■■□□ 2.01
RNF220-209ENST00000474064 SHPRHQ149N8 1683 aa27.61■■■□□ 2.01
RNF220-209ENST00000474064 NCKAP5LQ9HCH0 1330 aa27.6■■■□□ 2.01
RNF220-209ENST00000474064 SLFN5Q08AF3 891 aa27.6■■■□□ 2.01
RNF220-209ENST00000474064 DMRT2Q9Y5R5 561 aa27.59■■■□□ 2.01
RNF220-209ENST00000474064 NLRP1Q9C000 1473 aa27.59■■■□□ 2.01
RNF220-209ENST00000474064 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.59■■■□□ 2.01
RNF220-209ENST00000474064 U2AF1L5P0DN76 240 aaPredicted RBP27.58■■■□□ 2.01
RNF220-209ENST00000474064 U2AF1Q01081 240 aaKnown RBP eCLIP27.58■■■□□ 2.01
RNF220-209ENST00000474064 C3P01024 1663 aa27.57■■■□□ 2
RNF220-209ENST00000474064 EID1Q9Y6B2 187 aa27.57■■■□□ 2
RNF220-209ENST00000474064 ADAMTS13Q76LX8 1427 aa27.57■■■□□ 2
RNF220-209ENST00000474064 RUNDC1Q96C34 613 aa27.57■■■□□ 2
RNF220-209ENST00000474064 NPM2Q86SE8 214 aaKnown RBP27.56■■■□□ 2
RNF220-209ENST00000474064 ROBO2Q9HCK4 1378 aa27.55■■■□□ 2
RNF220-209ENST00000474064 TCP11L2Q8N4U5 519 aa27.55■■■□□ 2
RNF220-209ENST00000474064 NUDT16Q96DE0 195 aaKnown RBP27.55■■■□□ 2
RNF220-209ENST00000474064 NEFMP07197 916 aa27.54■■■□□ 2
RNF220-209ENST00000474064 FBLN1P23142 703 aa27.54■■■□□ 2
RNF220-209ENST00000474064 FER1L4A9Z1Z3 1794 aa27.54■■■□□ 2
RNF220-209ENST00000474064 PPIP5K1Q6PFW1 1433 aa27.54■■■□□ 2
RNF220-209ENST00000474064 LAS1LQ9Y4W2 734 aaKnown RBP27.54■■■□□ 2
RNF220-209ENST00000474064 PLEKHG1Q9ULL1 1385 aa27.54■■■□□ 2
RNF220-209ENST00000474064 U2SURPO15042 1029 aaKnown RBP27.54■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms