RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 RYDENQ9NUL5 291 aaKnown RBP10.83□□□□□ -0.68
CCDC93-207ENST00000474006 SPHKAPQ2M3C7 1700 aa10.83□□□□□ -0.68
CCDC93-207ENST00000474006 UHRF1BP1Q6BDS2 1440 aa10.83□□□□□ -0.68
CCDC93-207ENST00000474006 CFAP65Q6ZU64 1925 aaKnown RBP10.82□□□□□ -0.68
CCDC93-207ENST00000474006 HSPA2P54652 639 aa10.82□□□□□ -0.68
CCDC93-207ENST00000474006 CHRDL2Q6WN34 429 aa10.82□□□□□ -0.68
CCDC93-207ENST00000474006 CCDC61Q9Y6R9 512 aa10.82□□□□□ -0.68
CCDC93-207ENST00000474006 RIMS2Q9UQ26 1411 aa10.82□□□□□ -0.68
CCDC93-207ENST00000474006 PIK3C2BO00750 1634 aa10.81□□□□□ -0.68
CCDC93-207ENST00000474006 CFAP70Q5T0N1 1121 aa10.8□□□□□ -0.68
CCDC93-207ENST00000474006 NCKAP5LQ9HCH0 1330 aa10.8□□□□□ -0.68
CCDC93-207ENST00000474006 ADGRB3O60242 1522 aa10.79□□□□□ -0.68
CCDC93-207ENST00000474006 NBPF1Q3BBV0 1214 aa10.79□□□□□ -0.68
CCDC93-207ENST00000474006 C14orf93Q9H972 538 aaKnown RBP10.79□□□□□ -0.68
CCDC93-207ENST00000474006 TMEM131LA2VDJ0 1609 aa10.79□□□□□ -0.68
CCDC93-207ENST00000474006 NEURL4Q96JN8 1562 aa10.78□□□□□ -0.68
CCDC93-207ENST00000474006 ZFYVE9O95405 1425 aa10.78□□□□□ -0.68
CCDC93-207ENST00000474006 PDAP1Q13442 181 aaKnown RBP10.78□□□□□ -0.68
CCDC93-207ENST00000474006 PIP4P2Q8N4L2 257 aa10.78□□□□□ -0.68
CCDC93-207ENST00000474006 CEP170BQ9Y4F5 1589 aaPredicted RBP10.77□□□□□ -0.69
CCDC93-207ENST00000474006 ARHGAP23Q9P227 1491 aa10.76□□□□□ -0.69
CCDC93-207ENST00000474006 PAK3O75914 559 aaPredicted RBP10.76□□□□□ -0.69
CCDC93-207ENST00000474006 TMEM132EQ6IEE7 984 aa10.76□□□□□ -0.69
CCDC93-207ENST00000474006 ZNF579Q8NAF0 562 aaKnown RBP10.76□□□□□ -0.69
CCDC93-207ENST00000474006 SLC26A8Q96RN1 970 aa10.76□□□□□ -0.69
CCDC93-207ENST00000474006 PRAG1Q86YV5 1406 aa10.75□□□□□ -0.69
CCDC93-207ENST00000474006 TBX22Q9Y458 520 aa10.75□□□□□ -0.69
CCDC93-207ENST00000474006 SETD1BQ9UPS6 1966 aaKnown RBP10.75□□□□□ -0.69
CCDC93-207ENST00000474006 SLIT1O75093 1534 aa10.74□□□□□ -0.69
CCDC93-207ENST00000474006 NEXMIFQ5QGS0 1516 aa10.74□□□□□ -0.69
CCDC93-207ENST00000474006 MYO3AQ8NEV4 1616 aa10.74□□□□□ -0.69
CCDC93-207ENST00000474006 CARD11Q9BXL7 1154 aa10.74□□□□□ -0.69
CCDC93-207ENST00000474006 PLEKHG1Q9ULL1 1385 aa10.74□□□□□ -0.69
CCDC93-207ENST00000474006 LMTK3Q96Q04 1460 aa10.74□□□□□ -0.69
CCDC93-207ENST00000474006 PCDHB8Q9UN66 801 aa10.73□□□□□ -0.69
CCDC93-207ENST00000474006 PCDHB13Q9Y5F0 798 aa10.73□□□□□ -0.69
CCDC93-207ENST00000474006 PIK3C2GO75747 1445 aa10.73□□□□□ -0.69
CCDC93-207ENST00000474006 MYOM2P54296 1465 aa10.73□□□□□ -0.69
CCDC93-207ENST00000474006 NRXN1Q9ULB1 1477 aa10.73□□□□□ -0.69
CCDC93-207ENST00000474006 UBR1Q8IWV7 1749 aa10.72□□□□□ -0.69
CCDC93-207ENST00000474006 KIF1BO60333 1816 aa10.72□□□□□ -0.69
CCDC93-207ENST00000474006 ROCK2O75116 1388 aaKnown RBP10.72□□□□□ -0.69
CCDC93-207ENST00000474006 SCAF11Q99590 1463 aaKnown RBP10.72□□□□□ -0.69
CCDC93-207ENST00000474006 STK26Q9P289 416 aa10.71□□□□□ -0.69
CCDC93-207ENST00000474006 KDM5AP29375 1690 aaKnown RBP10.7□□□□□ -0.7
CCDC93-207ENST00000474006 METP08581 1390 aa10.7□□□□□ -0.7
CCDC93-207ENST00000474006 PSEN1P49768 467 aa10.7□□□□□ -0.7
CCDC93-207ENST00000474006 TRAK1Q9UPV9 953 aa10.7□□□□□ -0.7
CCDC93-207ENST00000474006 NPHP4O75161 1426 aaPredicted RBP10.69□□□□□ -0.7
CCDC93-207ENST00000474006 ADAMTS13Q76LX8 1427 aa10.69□□□□□ -0.7
CCDC93-207ENST00000474006 EIF4G2P78344 907 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCDC93-207ENST00000474006 KIF12Q96FN5 646 aa10.68□□□□□ -0.7
CCDC93-207ENST00000474006 HIRIP3Q9BW71 556 aaPredicted RBP10.68□□□□□ -0.7
CCDC93-207ENST00000474006 AMOTL2Q9Y2J4 779 aa10.68□□□□□ -0.7
CCDC93-207ENST00000474006 MED14O60244 1454 aa10.68□□□□□ -0.7
CCDC93-207ENST00000474006 GPRASP1Q5JY77 1395 aa10.67□□□□□ -0.7
CCDC93-207ENST00000474006 ZNF142P52746 1687 aaPredicted RBP10.67□□□□□ -0.7
CCDC93-207ENST00000474006 ST20-MTHFSA0A0A6YYL1 179 aa10.67□□□□□ -0.7
CCDC93-207ENST00000474006 HSPA5P11021 654 aaKnown RBP10.67□□□□□ -0.7
CCDC93-207ENST00000474006 RALGAPBQ86X10 1494 aa10.67□□□□□ -0.7
CCDC93-207ENST00000474006 ALKQ9UM73 1620 aa10.66□□□□□ -0.7
CCDC93-207ENST00000474006 KCNA6P17658 529 aa10.66□□□□□ -0.7
CCDC93-207ENST00000474006 IFNL1Q8IU54 200 aa10.66□□□□□ -0.7
CCDC93-207ENST00000474006 SIRT1Q96EB6 747 aa10.66□□□□□ -0.7
CCDC93-207ENST00000474006 LRPPRCP42704 1394 aaKnown RBP10.65□□□□□ -0.7
CCDC93-207ENST00000474006 ABCC11Q96J66 1382 aa10.65□□□□□ -0.7
CCDC93-207ENST00000474006 MYO5BQ9ULV0 1848 aa10.65□□□□□ -0.7
CCDC93-207ENST00000474006 PPLO60437 1756 aa10.65□□□□□ -0.7
CCDC93-207ENST00000474006 MAP3K13O43283 966 aa10.65□□□□□ -0.7
CCDC93-207ENST00000474006 WAPLQ7Z5K2 1190 aa10.65□□□□□ -0.7
CCDC93-207ENST00000474006 POGKQ9P215 609 aa10.65□□□□□ -0.7
CCDC93-207ENST00000474006 YTHDC2Q9H6S0 1430 aaKnown RBP10.65□□□□□ -0.7
CCDC93-207ENST00000474006 SETBP1Q9Y6X0 1596 aa10.65□□□□□ -0.71
CCDC93-207ENST00000474006 PRAM1Q96QH2 718 aa10.64□□□□□ -0.71
CCDC93-207ENST00000474006 PTPRUQ92729 1446 aa10.64□□□□□ -0.71
CCDC93-207ENST00000474006 USP47Q96K76 1375 aa10.64□□□□□ -0.71
CCDC93-207ENST00000474006 PIK3R4Q99570 1358 aa10.64□□□□□ -0.71
CCDC93-207ENST00000474006 SAFB2Q14151 953 aaKnown RBP eCLIP10.63□□□□□ -0.71
CCDC93-207ENST00000474006 IFT172Q9UG01 1749 aa10.63□□□□□ -0.71
CCDC93-207ENST00000474006 ADGRB1O14514 1584 aa10.62□□□□□ -0.71
CCDC93-207ENST00000474006 PROSER2Q86WR7 435 aaPredicted RBP10.62□□□□□ -0.71
CCDC93-207ENST00000474006 CENPJQ9HC77 1338 aaPredicted RBP10.61□□□□□ -0.71
CCDC93-207ENST00000474006 CD44P16070 742 aaKnown RBP10.61□□□□□ -0.71
CCDC93-207ENST00000474006 RBM33Q96EV2 1170 aaKnown RBP10.61□□□□□ -0.71
CCDC93-207ENST00000474006 TESK2Q96S53 571 aa10.61□□□□□ -0.71
CCDC93-207ENST00000474006 MFRPQ9BY79 579 aa10.61□□□□□ -0.71
CCDC93-207ENST00000474006 ZRANB1Q9UGI0 708 aa10.61□□□□□ -0.71
CCDC93-207ENST00000474006 ROBO2Q9HCK4 1378 aa10.61□□□□□ -0.71
CCDC93-207ENST00000474006 TRPM1Q7Z4N2 1603 aa10.6□□□□□ -0.71
CCDC93-207ENST00000474006 NRXN3Q9Y4C0 1643 aa10.6□□□□□ -0.71
CCDC93-207ENST00000474006 ZNF316A6NFI3 1004 aaPredicted RBP10.6□□□□□ -0.71
CCDC93-207ENST00000474006 C11orf95C9JLR9 678 aaPredicted RBP10.6□□□□□ -0.71
CCDC93-207ENST00000474006 NBR1Q14596 966 aa10.6□□□□□ -0.71
CCDC93-207ENST00000474006 POTEHQ6S545 545 aa10.6□□□□□ -0.71
CCDC93-207ENST00000474006 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
CCDC93-207ENST00000474006 PLEKHH1Q9ULM0 1364 aa10.6□□□□□ -0.71
CCDC93-207ENST00000474006 ZNF335Q9H4Z2 1342 aaPredicted RBP10.59□□□□□ -0.71
CCDC93-207ENST00000474006 ASXL1Q8IXJ9 1541 aa10.59□□□□□ -0.71
CCDC93-207ENST00000474006 MINK1Q8N4C8 1332 aaPredicted RBP10.58□□□□□ -0.71
CCDC93-207ENST00000474006 TECPR2O15040 1411 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms