RNA–Protein interactions for RNA: ENST00000473943.1

PHF20-209, Transcript of PHD finger protein 20, humanhuman

TSL 2

Gene PHF20, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-209ENST00000473943 C14orf93Q9H972 538 aaKnown RBP20.45■□□□□ 0.86
PHF20-209ENST00000473943 PNPLA6Q8IY17 1366 aa20.45■□□□□ 0.86
PHF20-209ENST00000473943 SOS2Q07890 1332 aaPredicted RBP20.44■□□□□ 0.86
PHF20-209ENST00000473943 TECPR2O15040 1411 aa20.44■□□□□ 0.86
PHF20-209ENST00000473943 IFT172Q9UG01 1749 aa20.42■□□□□ 0.86
PHF20-209ENST00000473943 CFAP70Q5T0N1 1121 aa20.42■□□□□ 0.86
PHF20-209ENST00000473943 YTHDC2Q9H6S0 1430 aaKnown RBP20.42■□□□□ 0.86
PHF20-209ENST00000473943 NUTM2FA1L443 756 aa20.41■□□□□ 0.86
PHF20-209ENST00000473943 HRCP23327 699 aa20.41■□□□□ 0.86
PHF20-209ENST00000473943 RXRBP28702 533 aa20.41■□□□□ 0.86
PHF20-209ENST00000473943 SIRT1Q96EB6 747 aa20.41■□□□□ 0.86
PHF20-209ENST00000473943 C8orf37Q96NL8 207 aa20.41■□□□□ 0.86
PHF20-209ENST00000473943 AFF2P51816 1311 aa20.41■□□□□ 0.86
PHF20-209ENST00000473943 DHX57Q6P158 1386 aaKnown RBP20.4■□□□□ 0.86
PHF20-209ENST00000473943 NPHP3Q7Z494 1330 aa20.4■□□□□ 0.86
PHF20-209ENST00000473943 CDC42BPGQ6DT37 1551 aa20.39■□□□□ 0.85
PHF20-209ENST00000473943 PLEKHH1Q9ULM0 1364 aa20.39■□□□□ 0.85
PHF20-209ENST00000473943 ADAMTS2O95450 1211 aa20.39■□□□□ 0.85
PHF20-209ENST00000473943 FOXO3O43524 673 aa20.38■□□□□ 0.85
PHF20-209ENST00000473943 NGLY1Q96IV0 654 aa20.38■□□□□ 0.85
PHF20-209ENST00000473943 MYOM2P54296 1465 aa20.37■□□□□ 0.85
PHF20-209ENST00000473943 NRXN1Q9ULB1 1477 aa20.37■□□□□ 0.85
PHF20-209ENST00000473943 LAMC1P11047 1609 aa20.36■□□□□ 0.85
PHF20-209ENST00000473943 KDM2AQ9Y2K7 1162 aa20.35■□□□□ 0.85
PHF20-209ENST00000473943 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
PHF20-209ENST00000473943 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
PHF20-209ENST00000473943 PRAM1Q96QH2 718 aa20.34■□□□□ 0.85
PHF20-209ENST00000473943 QTRT2Q9H974 415 aaKnown RBP20.34■□□□□ 0.85
PHF20-209ENST00000473943 KNDC1Q76NI1 1749 aa20.33■□□□□ 0.85
PHF20-209ENST00000473943 POGKQ9P215 609 aa20.33■□□□□ 0.85
PHF20-209ENST00000473943 SAFB2Q14151 953 aaKnown RBP eCLIP20.32■□□□□ 0.84
PHF20-209ENST00000473943 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
PHF20-209ENST00000473943 RBM6P78332 1123 aaKnown RBP20.3■□□□□ 0.84
PHF20-209ENST00000473943 PXDNQ92626 1479 aa20.29■□□□□ 0.84
PHF20-209ENST00000473943 USP21Q9UK80 565 aa20.28■□□□□ 0.84
PHF20-209ENST00000473943 TRAK1Q9UPV9 953 aa20.28■□□□□ 0.84
PHF20-209ENST00000473943 CDK12Q9NYV4 1490 aaPredicted RBP20.27■□□□□ 0.84
PHF20-209ENST00000473943 KRT28Q7Z3Y7 464 aa20.27■□□□□ 0.84
PHF20-209ENST00000473943 PHF8Q9UPP1 1060 aa20.27■□□□□ 0.84
PHF20-209ENST00000473943 PSME1Q06323 249 aa20.26■□□□□ 0.83
PHF20-209ENST00000473943 FNBP4Q8N3X1 1017 aaPredicted RBP20.26■□□□□ 0.83
PHF20-209ENST00000473943 FMN2Q9NZ56 1722 aa20.25■□□□□ 0.83
PHF20-209ENST00000473943 TRPC5Q9UL62 973 aaPredicted RBP20.25■□□□□ 0.83
PHF20-209ENST00000473943 SPATA31A3Q5VYP0 1347 aa20.25■□□□□ 0.83
PHF20-209ENST00000473943 DLC1Q96QB1 1528 aa20.24■□□□□ 0.83
PHF20-209ENST00000473943 UPF1Q92900 1129 aaKnown RBP eCLIP20.24■□□□□ 0.83
PHF20-209ENST00000473943 COL22A1Q8NFW1 1626 aaPredicted RBP20.23■□□□□ 0.83
PHF20-209ENST00000473943 HIRIP3Q9BW71 556 aaPredicted RBP20.22■□□□□ 0.83
PHF20-209ENST00000473943 ADGRB1O14514 1584 aa20.21■□□□□ 0.83
PHF20-209ENST00000473943 KIF1AQ12756 1690 aa20.21■□□□□ 0.83
PHF20-209ENST00000473943 MINK1Q8N4C8 1332 aaPredicted RBP20.21■□□□□ 0.83
PHF20-209ENST00000473943 HAP1P54257 671 aaPredicted RBP20.2■□□□□ 0.82
PHF20-209ENST00000473943 LMOD2Q6P5Q4 547 aa20.19■□□□□ 0.82
PHF20-209ENST00000473943 PMFBP1Q8TBY8 1022 aa20.19■□□□□ 0.82
PHF20-209ENST00000473943 RGS12O14924 1447 aa20.19■□□□□ 0.82
PHF20-209ENST00000473943 ANKARQ7Z5J8 1434 aa20.19■□□□□ 0.82
PHF20-209ENST00000473943 EIF3AQ14152 1382 aaKnown RBP20.18■□□□□ 0.82
PHF20-209ENST00000473943 WASLO00401 505 aaPredicted RBP20.16■□□□□ 0.82
PHF20-209ENST00000473943 PLEKHG5O94827 1062 aa20.16■□□□□ 0.82
PHF20-209ENST00000473943 SBNO1A3KN83 1393 aa20.16■□□□□ 0.82
PHF20-209ENST00000473943 TNS3Q68CZ2 1445 aa20.16■□□□□ 0.82
PHF20-209ENST00000473943 ATRNO75882 1429 aa20.15■□□□□ 0.82
PHF20-209ENST00000473943 RGPD8O14715 1765 aaPredicted RBP20.14■□□□□ 0.81
PHF20-209ENST00000473943 CABLES1Q8TDN4 633 aa20.14■□□□□ 0.81
PHF20-209ENST00000473943 BCL9LQ86UU0 1499 aa20.13■□□□□ 0.81
PHF20-209ENST00000473943 ARHGEF10O15013 1369 aa20.13■□□□□ 0.81
PHF20-209ENST00000473943 UNC5CLQ8IV45 518 aa20.13■□□□□ 0.81
PHF20-209ENST00000473943 ADGRB2O60241 1585 aa20.12■□□□□ 0.81
PHF20-209ENST00000473943 GPRASP1Q5JY77 1395 aa20.12■□□□□ 0.81
PHF20-209ENST00000473943 GJD4Q96KN9 370 aaPredicted RBP20.12■□□□□ 0.81
PHF20-209ENST00000473943 PRR36Q9H6K5 1346 aa20.11■□□□□ 0.81
PHF20-209ENST00000473943 NGDNQ8NEJ9 315 aaKnown RBP20.11■□□□□ 0.81
PHF20-209ENST00000473943 ATAD2Q6PL18 1390 aa20.09■□□□□ 0.81
PHF20-209ENST00000473943 USP32Q8NFA0 1604 aa20.09■□□□□ 0.81
PHF20-209ENST00000473943 TULP4Q9NRJ4 1543 aa20.08■□□□□ 0.81
PHF20-209ENST00000473943 MARF1Q9Y4F3 1742 aaKnown RBP20.08■□□□□ 0.81
PHF20-209ENST00000473943 NUDT16Q96DE0 195 aaKnown RBP20.08■□□□□ 0.81
PHF20-209ENST00000473943 SLIT2O94813 1529 aa20.07■□□□□ 0.8
PHF20-209ENST00000473943 PAK3O75914 559 aaPredicted RBP20.07■□□□□ 0.8
PHF20-209ENST00000473943 NBPF1Q3BBV0 1214 aa20.06■□□□□ 0.8
PHF20-209ENST00000473943 CDK19Q9BWU1 502 aa20.06■□□□□ 0.8
PHF20-209ENST00000473943 FAM83GA6ND36 823 aa20.04■□□□□ 0.8
PHF20-209ENST00000473943 CCDC9Q9Y3X0 531 aaKnown RBP20.04■□□□□ 0.8
PHF20-209ENST00000473943 VPS72Q15906 364 aa20.03■□□□□ 0.8
PHF20-209ENST00000473943 ARHGEF28Q8N1W1 1705 aaKnown RBP20.02■□□□□ 0.8
PHF20-209ENST00000473943 RALGAPBQ86X10 1494 aa20.02■□□□□ 0.8
PHF20-209ENST00000473943 L3MBTL2Q969R5 705 aa20.01■□□□□ 0.79
PHF20-209ENST00000473943 CCDC61Q9Y6R9 512 aa20.01■□□□□ 0.79
PHF20-209ENST00000473943 KIAA1210Q9ULL0 1709 aa20■□□□□ 0.79
PHF20-209ENST00000473943 ATP7BP35670 1465 aa19.99■□□□□ 0.79
PHF20-209ENST00000473943 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.99■□□□□ 0.79
PHF20-209ENST00000473943 NEUROD1Q13562 356 aa19.99■□□□□ 0.79
PHF20-209ENST00000473943 SIN3AQ96ST3 1273 aa19.99■□□□□ 0.79
PHF20-209ENST00000473943 CENPJQ9HC77 1338 aaPredicted RBP19.99■□□□□ 0.79
PHF20-209ENST00000473943 CCDC125Q86Z20 511 aa19.98■□□□□ 0.79
PHF20-209ENST00000473943 BTG4Q9NY30 223 aa19.98■□□□□ 0.79
PHF20-209ENST00000473943 TRPM3Q9HCF6 1732 aaPredicted RBP19.97■□□□□ 0.79
PHF20-209ENST00000473943 SRPK2P78362 688 aaKnown RBP19.97■□□□□ 0.79
PHF20-209ENST00000473943 NBPF8Q3BBV2 869 aa19.97■□□□□ 0.79
PHF20-209ENST00000473943 SEPT12Q8IYM1 358 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms