RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 NSD3Q9BZ95 1437 aa24.35■■□□□ 1.49
VARS2-206ENST00000473916 NPC1L1Q9UHC9 1359 aa24.34■■□□□ 1.49
VARS2-206ENST00000473916 ADAMTS13Q76LX8 1427 aa24.34■■□□□ 1.49
VARS2-206ENST00000473916 PPP2R1AP30153 589 aa24.34■■□□□ 1.49
VARS2-206ENST00000473916 SRPK2P78362 688 aaKnown RBP24.33■■□□□ 1.49
VARS2-206ENST00000473916 ZBED9Q6R2W3 1325 aa24.33■■□□□ 1.48
VARS2-206ENST00000473916 ABCC11Q96J66 1382 aa24.32■■□□□ 1.48
VARS2-206ENST00000473916 HDGFP51858 240 aaKnown RBP24.32■■□□□ 1.48
VARS2-206ENST00000473916 ADAMTSL3P82987 1691 aa24.31■■□□□ 1.48
VARS2-206ENST00000473916 KNDC1Q76NI1 1749 aa24.31■■□□□ 1.48
VARS2-206ENST00000473916 TXNDC2Q86VQ3 553 aa24.31■■□□□ 1.48
VARS2-206ENST00000473916 SLIT1O75093 1534 aa24.3■■□□□ 1.48
VARS2-206ENST00000473916 PUS7Q96PZ0 661 aaKnown RBP24.3■■□□□ 1.48
VARS2-206ENST00000473916 ARHGAP23Q9P227 1491 aa24.3■■□□□ 1.48
VARS2-206ENST00000473916 PLEKHG1Q9ULL1 1385 aa24.29■■□□□ 1.48
VARS2-206ENST00000473916 CDK19Q9BWU1 502 aa24.27■■□□□ 1.48
VARS2-206ENST00000473916 ANKRD36BQ8N2N9 1353 aa24.27■■□□□ 1.48
VARS2-206ENST00000473916 USP32Q8NFA0 1604 aa24.27■■□□□ 1.48
VARS2-206ENST00000473916 CPS1P31327 1500 aa24.26■■□□□ 1.47
VARS2-206ENST00000473916 CEP170BQ9Y4F5 1589 aaPredicted RBP24.26■■□□□ 1.47
VARS2-206ENST00000473916 SLC26A8Q96RN1 970 aa24.25■■□□□ 1.47
VARS2-206ENST00000473916 A0A1W2PP64 1363 aa24.25■■□□□ 1.47
VARS2-206ENST00000473916 TECPR2O15040 1411 aa24.24■■□□□ 1.47
VARS2-206ENST00000473916 MED14O60244 1454 aa24.24■■□□□ 1.47
VARS2-206ENST00000473916 CD163L1Q9NR16 1453 aa24.24■■□□□ 1.47
VARS2-206ENST00000473916 ATAD2Q6PL18 1390 aa24.23■■□□□ 1.47
VARS2-206ENST00000473916 EID1Q9Y6B2 187 aa24.23■■□□□ 1.47
VARS2-206ENST00000473916 ROBO2Q9HCK4 1378 aa24.22■■□□□ 1.47
VARS2-206ENST00000473916 PTPRUQ92729 1446 aa24.21■■□□□ 1.47
VARS2-206ENST00000473916 THEMISQ8N1K5 641 aaPredicted RBP24.2■■□□□ 1.47
VARS2-206ENST00000473916 TNNT2P45379 298 aaPredicted RBP24.19■■□□□ 1.46
VARS2-206ENST00000473916 FAM135BQ49AJ0 1406 aa24.19■■□□□ 1.46
VARS2-206ENST00000473916 SUPT16HQ9Y5B9 1047 aaKnown RBP24.19■■□□□ 1.46
VARS2-206ENST00000473916 NINLQ9Y2I6 1382 aa24.18■■□□□ 1.46
VARS2-206ENST00000473916 CGNL1Q0VF96 1302 aa24.17■■□□□ 1.46
VARS2-206ENST00000473916 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.17■■□□□ 1.46
VARS2-206ENST00000473916 CABP1Q9NZU7 370 aa24.17■■□□□ 1.46
VARS2-206ENST00000473916 BLMP54132 1417 aaPredicted RBP24.17■■□□□ 1.46
VARS2-206ENST00000473916 ADAMTS8Q9UP79 889 aa24.17■■□□□ 1.46
VARS2-206ENST00000473916 ZNF142P52746 1687 aaPredicted RBP24.16■■□□□ 1.46
VARS2-206ENST00000473916 MORC1Q86VD1 984 aa24.16■■□□□ 1.46
VARS2-206ENST00000473916 SALL2Q9Y467 1007 aaPredicted RBP24.16■■□□□ 1.46
VARS2-206ENST00000473916 WASLO00401 505 aaPredicted RBP24.15■■□□□ 1.46
VARS2-206ENST00000473916 SIRT1Q96EB6 747 aa24.13■■□□□ 1.45
VARS2-206ENST00000473916 NCKAP5LQ9HCH0 1330 aa24.13■■□□□ 1.45
VARS2-206ENST00000473916 FKBP8Q14318 412 aa24.12■■□□□ 1.45
VARS2-206ENST00000473916 TERF2IPQ9NYB0 399 aa24.11■■□□□ 1.45
VARS2-206ENST00000473916 SETD1BQ9UPS6 1966 aaKnown RBP24.1■■□□□ 1.45
VARS2-206ENST00000473916 ANKRD26Q9UPS8 1709 aa24.1■■□□□ 1.45
VARS2-206ENST00000473916 WDR43Q15061 677 aaKnown RBP eCLIP24.1■■□□□ 1.45
VARS2-206ENST00000473916 AMOTL2Q9Y2J4 779 aa24.1■■□□□ 1.45
VARS2-206ENST00000473916 TBX22Q9Y458 520 aa24.1■■□□□ 1.45
VARS2-206ENST00000473916 DIP2AQ14689 1571 aa24.09■■□□□ 1.45
VARS2-206ENST00000473916 KIF20BQ96Q89 1820 aa24.09■■□□□ 1.45
VARS2-206ENST00000473916 GGNBP2Q9H3C7 697 aa24.09■■□□□ 1.45
VARS2-206ENST00000473916 SHPRHQ149N8 1683 aa24.08■■□□□ 1.45
VARS2-206ENST00000473916 PPIP5K1Q6PFW1 1433 aa24.08■■□□□ 1.45
VARS2-206ENST00000473916 ADGRB2O60241 1585 aa24.08■■□□□ 1.45
VARS2-206ENST00000473916 SMG6Q86US8 1419 aaKnown RBP24.08■■□□□ 1.44
VARS2-206ENST00000473916 NSD2O96028 1365 aa24.08■■□□□ 1.44
VARS2-206ENST00000473916 INSRP06213 1382 aa24.07■■□□□ 1.44
VARS2-206ENST00000473916 HDGFL2Q7Z4V5 671 aaPredicted RBP24.07■■□□□ 1.44
VARS2-206ENST00000473916 ATP7BP35670 1465 aa24.07■■□□□ 1.44
VARS2-206ENST00000473916 PRR36Q9H6K5 1346 aa24.07■■□□□ 1.44
VARS2-206ENST00000473916 XRN1Q8IZH2 1706 aaKnown RBP24.06■■□□□ 1.44
VARS2-206ENST00000473916 FYB1O15117 783 aa24.06■■□□□ 1.44
VARS2-206ENST00000473916 NUDT16Q96DE0 195 aaKnown RBP24.06■■□□□ 1.44
VARS2-206ENST00000473916 POLR3AO14802 1390 aaPredicted RBP24.04■■□□□ 1.44
VARS2-206ENST00000473916 IRX6P78412 446 aaPredicted RBP24.03■■□□□ 1.44
VARS2-206ENST00000473916 NUDCQ9Y266 331 aa24.03■■□□□ 1.44
VARS2-206ENST00000473916 NUTM2FA1L443 756 aa24.03■■□□□ 1.44
VARS2-206ENST00000473916 MTHFSP49914 203 aa24.03■■□□□ 1.44
VARS2-206ENST00000473916 CCDC146Q8IYE0 955 aa24.03■■□□□ 1.44
VARS2-206ENST00000473916 CDC42BPGQ6DT37 1551 aa24.02■■□□□ 1.44
VARS2-206ENST00000473916 PTCH1Q13635 1447 aa24.02■■□□□ 1.44
VARS2-206ENST00000473916 NEFLP07196 543 aa24.02■■□□□ 1.44
VARS2-206ENST00000473916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.02■■□□□ 1.44
VARS2-206ENST00000473916 ITSN1Q15811 1721 aa24.02■■□□□ 1.44
VARS2-206ENST00000473916 CPSF1Q10570 1443 aaKnown RBP24.02■■□□□ 1.44
VARS2-206ENST00000473916 AKAP12Q02952 1782 aa24.02■■□□□ 1.44
VARS2-206ENST00000473916 TOPAZ1Q8N9V7 1692 aa24.01■■□□□ 1.43
VARS2-206ENST00000473916 MON2Q7Z3U7 1717 aa24■■□□□ 1.43
VARS2-206ENST00000473916 ANKLE2Q86XL3 938 aa24■■□□□ 1.43
VARS2-206ENST00000473916 KCNA6P17658 529 aa23.99■■□□□ 1.43
VARS2-206ENST00000473916 CCDC61Q9Y6R9 512 aa23.99■■□□□ 1.43
VARS2-206ENST00000473916 CDCA7LQ96GN5 454 aa23.98■■□□□ 1.43
VARS2-206ENST00000473916 RGPD8O14715 1765 aaPredicted RBP23.98■■□□□ 1.43
VARS2-206ENST00000473916 CHD2O14647 1828 aaKnown RBP23.96■■□□□ 1.43
VARS2-206ENST00000473916 NKTRP30414 1462 aaKnown RBP23.96■■□□□ 1.43
VARS2-206ENST00000473916 EDC4Q6P2E9 1401 aaKnown RBP23.94■■□□□ 1.42
VARS2-206ENST00000473916 FBLN1P23142 703 aa23.94■■□□□ 1.42
VARS2-206ENST00000473916 ZRANB1Q9UGI0 708 aa23.94■■□□□ 1.42
VARS2-206ENST00000473916 NME9Q86XW9 330 aa23.93■■□□□ 1.42
VARS2-206ENST00000473916 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
VARS2-206ENST00000473916 APAF1O14727 1248 aa23.91■■□□□ 1.42
VARS2-206ENST00000473916 NRKQ7Z2Y5 1582 aa23.9■■□□□ 1.42
VARS2-206ENST00000473916 MAP2P11137 1827 aaKnown RBP23.9■■□□□ 1.42
VARS2-206ENST00000473916 COL3A1P02461 1466 aaPredicted RBP23.9■■□□□ 1.42
VARS2-206ENST00000473916 RBM33Q96EV2 1170 aaKnown RBP23.89■■□□□ 1.42
VARS2-206ENST00000473916 CFAP53Q96M91 514 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms