RNA–Protein interactions for RNA: ENST00000473911.1

CLIC3-201, Transcript of chloride intracellular channel 3, humanhuman

TSL 5

Gene CLIC3, Length 732 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-201ENST00000473911 LAMC1P11047 1609 aa22.97■■□□□ 1.27
CLIC3-201ENST00000473911 RGS12O14924 1447 aa22.96■■□□□ 1.27
CLIC3-201ENST00000473911 SOS2Q07890 1332 aaPredicted RBP22.95■■□□□ 1.26
CLIC3-201ENST00000473911 STK26Q9P289 416 aa22.93■■□□□ 1.26
CLIC3-201ENST00000473911 PRAG1Q86YV5 1406 aa22.92■■□□□ 1.26
CLIC3-201ENST00000473911 RBM6P78332 1123 aaKnown RBP22.91■■□□□ 1.26
CLIC3-201ENST00000473911 NGLY1Q96IV0 654 aa22.91■■□□□ 1.26
CLIC3-201ENST00000473911 PIK3C2GO75747 1445 aa22.9■■□□□ 1.26
CLIC3-201ENST00000473911 HRCP23327 699 aa22.89■■□□□ 1.25
CLIC3-201ENST00000473911 TMEM132EQ6IEE7 984 aa22.89■■□□□ 1.25
CLIC3-201ENST00000473911 LRPPRCP42704 1394 aaKnown RBP22.88■■□□□ 1.25
CLIC3-201ENST00000473911 IFT172Q9UG01 1749 aa22.87■■□□□ 1.25
CLIC3-201ENST00000473911 XPCQ01831 940 aaPredicted RBP22.86■■□□□ 1.25
CLIC3-201ENST00000473911 WAPLQ7Z5K2 1190 aa22.86■■□□□ 1.25
CLIC3-201ENST00000473911 SRCAPQ6ZRS2 3230 aa22.85■■□□□ 1.25
CLIC3-201ENST00000473911 COL22A1Q8NFW1 1626 aaPredicted RBP22.84■■□□□ 1.25
CLIC3-201ENST00000473911 NUTM2FA1L443 756 aa22.84■■□□□ 1.25
CLIC3-201ENST00000473911 ESCO1Q5FWF5 840 aa22.84■■□□□ 1.25
CLIC3-201ENST00000473911 USP21Q9UK80 565 aa22.84■■□□□ 1.25
CLIC3-201ENST00000473911 ABCC11Q96J66 1382 aa22.84■■□□□ 1.25
CLIC3-201ENST00000473911 PLEKHH1Q9ULM0 1364 aa22.84■■□□□ 1.25
CLIC3-201ENST00000473911 TECPR2O15040 1411 aa22.83■■□□□ 1.25
CLIC3-201ENST00000473911 C14orf93Q9H972 538 aaKnown RBP22.83■■□□□ 1.25
CLIC3-201ENST00000473911 MYOM2P54296 1465 aa22.83■■□□□ 1.25
CLIC3-201ENST00000473911 PXDNQ92626 1479 aa22.83■■□□□ 1.25
CLIC3-201ENST00000473911 CDC42BPGQ6DT37 1551 aa22.82■■□□□ 1.24
CLIC3-201ENST00000473911 CFAP70Q5T0N1 1121 aa22.82■■□□□ 1.24
CLIC3-201ENST00000473911 YTHDC2Q9H6S0 1430 aaKnown RBP22.82■■□□□ 1.24
CLIC3-201ENST00000473911 FOXO3O43524 673 aa22.81■■□□□ 1.24
CLIC3-201ENST00000473911 FNBP4Q8N3X1 1017 aaPredicted RBP22.81■■□□□ 1.24
CLIC3-201ENST00000473911 EP400Q96L91 3159 aa22.81■■□□□ 1.24
CLIC3-201ENST00000473911 NRXN1Q9ULB1 1477 aa22.8■■□□□ 1.24
CLIC3-201ENST00000473911 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
CLIC3-201ENST00000473911 ATRNO75882 1429 aa22.79■■□□□ 1.24
CLIC3-201ENST00000473911 TRPC5Q9UL62 973 aaPredicted RBP22.78■■□□□ 1.24
CLIC3-201ENST00000473911 KDM2AQ9Y2K7 1162 aa22.78■■□□□ 1.24
CLIC3-201ENST00000473911 NPHP3Q7Z494 1330 aa22.78■■□□□ 1.24
CLIC3-201ENST00000473911 DCAF11Q8TEB1 546 aa22.77■■□□□ 1.24
CLIC3-201ENST00000473911 BCL9LQ86UU0 1499 aa22.77■■□□□ 1.24
CLIC3-201ENST00000473911 MARF1Q9Y4F3 1742 aaKnown RBP22.75■■□□□ 1.23
CLIC3-201ENST00000473911 SIRT1Q96EB6 747 aa22.75■■□□□ 1.23
CLIC3-201ENST00000473911 KNDC1Q76NI1 1749 aa22.74■■□□□ 1.23
CLIC3-201ENST00000473911 FMN2Q9NZ56 1722 aa22.72■■□□□ 1.23
CLIC3-201ENST00000473911 SAFB2Q14151 953 aaKnown RBP eCLIP22.71■■□□□ 1.23
CLIC3-201ENST00000473911 PRAM1Q96QH2 718 aa22.71■■□□□ 1.23
CLIC3-201ENST00000473911 RGPD8O14715 1765 aaPredicted RBP22.71■■□□□ 1.23
CLIC3-201ENST00000473911 STAC3Q96MF2 364 aa22.7■■□□□ 1.22
CLIC3-201ENST00000473911 POGKQ9P215 609 aa22.7■■□□□ 1.22
CLIC3-201ENST00000473911 ATAD2Q6PL18 1390 aa22.7■■□□□ 1.22
CLIC3-201ENST00000473911 SPATA31A3Q5VYP0 1347 aa22.67■■□□□ 1.22
CLIC3-201ENST00000473911 GJD4Q96KN9 370 aaPredicted RBP22.66■■□□□ 1.22
CLIC3-201ENST00000473911 TRAK1Q9UPV9 953 aa22.66■■□□□ 1.22
CLIC3-201ENST00000473911 KRT28Q7Z3Y7 464 aa22.65■■□□□ 1.22
CLIC3-201ENST00000473911 GLI3P10071 1580 aa22.64■■□□□ 1.22
CLIC3-201ENST00000473911 ADGRB1O14514 1584 aa22.63■■□□□ 1.21
CLIC3-201ENST00000473911 SLIT2O94813 1529 aa22.63■■□□□ 1.21
CLIC3-201ENST00000473911 DLC1Q96QB1 1528 aa22.63■■□□□ 1.21
CLIC3-201ENST00000473911 PLEKHG5O94827 1062 aa22.63■■□□□ 1.21
CLIC3-201ENST00000473911 CABLES1Q8TDN4 633 aa22.63■■□□□ 1.21
CLIC3-201ENST00000473911 KIF1AQ12756 1690 aa22.62■■□□□ 1.21
CLIC3-201ENST00000473911 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.61■■□□□ 1.21
CLIC3-201ENST00000473911 RALGAPBQ86X10 1494 aa22.6■■□□□ 1.21
CLIC3-201ENST00000473911 UNC5CLQ8IV45 518 aa22.6■■□□□ 1.21
CLIC3-201ENST00000473911 PHF8Q9UPP1 1060 aa22.6■■□□□ 1.21
CLIC3-201ENST00000473911 USP32Q8NFA0 1604 aa22.6■■□□□ 1.21
CLIC3-201ENST00000473911 BRWD3Q6RI45 1802 aa22.59■■□□□ 1.21
CLIC3-201ENST00000473911 MINK1Q8N4C8 1332 aaPredicted RBP22.58■■□□□ 1.21
CLIC3-201ENST00000473911 HIRIP3Q9BW71 556 aaPredicted RBP22.58■■□□□ 1.21
CLIC3-201ENST00000473911 TNS3Q68CZ2 1445 aa22.57■■□□□ 1.2
CLIC3-201ENST00000473911 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
CLIC3-201ENST00000473911 ABCA3Q99758 1704 aa22.54■■□□□ 1.2
CLIC3-201ENST00000473911 PSME1Q06323 249 aa22.54■■□□□ 1.2
CLIC3-201ENST00000473911 ANKARQ7Z5J8 1434 aa22.54■■□□□ 1.2
CLIC3-201ENST00000473911 EIF3AQ14152 1382 aaKnown RBP22.53■■□□□ 1.2
CLIC3-201ENST00000473911 ZRANB1Q9UGI0 708 aa22.53■■□□□ 1.2
CLIC3-201ENST00000473911 PLCH1Q4KWH8 1693 aa22.52■■□□□ 1.2
CLIC3-201ENST00000473911 LMOD2Q6P5Q4 547 aa22.52■■□□□ 1.2
CLIC3-201ENST00000473911 ADGRB2O60241 1585 aa22.51■■□□□ 1.19
CLIC3-201ENST00000473911 SEPT12Q8IYM1 358 aa22.51■■□□□ 1.19
CLIC3-201ENST00000473911 SBNO1A3KN83 1393 aa22.5■■□□□ 1.19
CLIC3-201ENST00000473911 FAM83GA6ND36 823 aa22.5■■□□□ 1.19
CLIC3-201ENST00000473911 WASLO00401 505 aaPredicted RBP22.5■■□□□ 1.19
CLIC3-201ENST00000473911 DEFB132Q7Z7B7 95 aa22.5■■□□□ 1.19
CLIC3-201ENST00000473911 CCDC125Q86Z20 511 aa22.5■■□□□ 1.19
CLIC3-201ENST00000473911 HAP1P54257 671 aaPredicted RBP22.49■■□□□ 1.19
CLIC3-201ENST00000473911 VPS72Q15906 364 aa22.49■■□□□ 1.19
CLIC3-201ENST00000473911 PRR36Q9H6K5 1346 aa22.49■■□□□ 1.19
CLIC3-201ENST00000473911 TRPM3Q9HCF6 1732 aaPredicted RBP22.48■■□□□ 1.19
CLIC3-201ENST00000473911 NWD2Q9ULI1 1742 aa22.46■■□□□ 1.19
CLIC3-201ENST00000473911 TULP4Q9NRJ4 1543 aa22.46■■□□□ 1.19
CLIC3-201ENST00000473911 ONECUT3O60422 494 aaPredicted RBP22.45■■□□□ 1.18
CLIC3-201ENST00000473911 NEUROD1Q13562 356 aa22.45■■□□□ 1.18
CLIC3-201ENST00000473911 NBPF1Q3BBV0 1214 aa22.45■■□□□ 1.18
CLIC3-201ENST00000473911 SIN3AQ96ST3 1273 aa22.45■■□□□ 1.18
CLIC3-201ENST00000473911 CCDC9Q9Y3X0 531 aaKnown RBP22.45■■□□□ 1.18
CLIC3-201ENST00000473911 BLMP54132 1417 aaPredicted RBP22.45■■□□□ 1.18
CLIC3-201ENST00000473911 ARHGEF10O15013 1369 aa22.44■■□□□ 1.18
CLIC3-201ENST00000473911 GPRASP1Q5JY77 1395 aa22.44■■□□□ 1.18
CLIC3-201ENST00000473911 L3MBTL2Q969R5 705 aa22.44■■□□□ 1.18
CLIC3-201ENST00000473911 NRAPQ86VF7 1730 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms