RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 GJD4Q96KN9 370 aaPredicted RBP17.59■□□□□ 0.41
MACF1-215ENST00000473843 SF3B2Q13435 895 aaKnown RBP17.58■□□□□ 0.4
MACF1-215ENST00000473843 E9PCH4 1651 aa17.58■□□□□ 0.4
MACF1-215ENST00000473843 GLI3P10071 1580 aa17.57■□□□□ 0.4
MACF1-215ENST00000473843 KANK4Q5T7N3 995 aaPredicted RBP17.57■□□□□ 0.4
MACF1-215ENST00000473843 IQGAP3Q86VI3 1631 aa17.57■□□□□ 0.4
MACF1-215ENST00000473843 HRCP23327 699 aa17.56■□□□□ 0.4
MACF1-215ENST00000473843 CHIC2Q9UKJ5 165 aa17.56■□□□□ 0.4
MACF1-215ENST00000473843 ADGRL2O95490 1459 aa17.55■□□□□ 0.4
MACF1-215ENST00000473843 RALGAPBQ86X10 1494 aa17.55■□□□□ 0.4
MACF1-215ENST00000473843 VPS8Q8N3P4 1428 aa17.55■□□□□ 0.4
MACF1-215ENST00000473843 PSDA5PKW4 1024 aaPredicted RBP17.53■□□□□ 0.4
MACF1-215ENST00000473843 METP08581 1390 aa17.53■□□□□ 0.4
MACF1-215ENST00000473843 ANKRD50Q9ULJ7 1429 aa17.51■□□□□ 0.39
MACF1-215ENST00000473843 ORAI2Q96SN7 254 aa17.5■□□□□ 0.39
MACF1-215ENST00000473843 SLIT2O94813 1529 aa17.48■□□□□ 0.39
MACF1-215ENST00000473843 YY1P25490 414 aa17.48■□□□□ 0.39
MACF1-215ENST00000473843 UNC5CLQ8IV45 518 aa17.48■□□□□ 0.39
MACF1-215ENST00000473843 PXDNQ92626 1479 aa17.47■□□□□ 0.39
MACF1-215ENST00000473843 BAG6P46379 1132 aa17.46■□□□□ 0.39
MACF1-215ENST00000473843 NPHP3Q7Z494 1330 aa17.45■□□□□ 0.38
MACF1-215ENST00000473843 RGPD1P0DJD0 1748 aa17.44■□□□□ 0.38
MACF1-215ENST00000473843 SEPT12Q8IYM1 358 aa17.44■□□□□ 0.38
MACF1-215ENST00000473843 USP32Q8NFA0 1604 aa17.43■□□□□ 0.38
MACF1-215ENST00000473843 NWD2Q9ULI1 1742 aa17.41■□□□□ 0.38
MACF1-215ENST00000473843 KRT27Q7Z3Y8 459 aa17.41■□□□□ 0.38
MACF1-215ENST00000473843 PLCH1Q4KWH8 1693 aa17.4■□□□□ 0.38
MACF1-215ENST00000473843 CDC42BPGQ6DT37 1551 aa17.4■□□□□ 0.38
MACF1-215ENST00000473843 PRAG1Q86YV5 1406 aa17.39■□□□□ 0.38
MACF1-215ENST00000473843 NEXMIFQ5QGS0 1516 aa17.39■□□□□ 0.37
MACF1-215ENST00000473843 ROBO2Q9HCK4 1378 aa17.39■□□□□ 0.37
MACF1-215ENST00000473843 ONECUT3O60422 494 aaPredicted RBP17.38■□□□□ 0.37
MACF1-215ENST00000473843 R3HDM1Q15032 1099 aaKnown RBP17.38■□□□□ 0.37
MACF1-215ENST00000473843 VPS72Q15906 364 aa17.37■□□□□ 0.37
MACF1-215ENST00000473843 ZNF326Q5BKZ1 582 aaKnown RBP17.37■□□□□ 0.37
MACF1-215ENST00000473843 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
MACF1-215ENST00000473843 LRPPRCP42704 1394 aaKnown RBP17.36■□□□□ 0.37
MACF1-215ENST00000473843 HFM1A2PYH4 1435 aa17.36■□□□□ 0.37
MACF1-215ENST00000473843 TNS1Q9HBL0 1735 aaKnown RBP17.35■□□□□ 0.37
MACF1-215ENST00000473843 XPCQ01831 940 aaPredicted RBP17.35■□□□□ 0.37
MACF1-215ENST00000473843 DISP2A7MBM2 1401 aa17.35■□□□□ 0.37
MACF1-215ENST00000473843 EN1Q05925 392 aaPredicted RBP17.34■□□□□ 0.37
MACF1-215ENST00000473843 FOXO3O43524 673 aa17.33■□□□□ 0.36
MACF1-215ENST00000473843 ABCA3Q99758 1704 aa17.32■□□□□ 0.36
MACF1-215ENST00000473843 KIF1BO60333 1816 aa17.31■□□□□ 0.36
MACF1-215ENST00000473843 IFFO2Q5TF58 517 aa17.31■□□□□ 0.36
MACF1-215ENST00000473843 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
MACF1-215ENST00000473843 KIF1AQ12756 1690 aa17.31■□□□□ 0.36
MACF1-215ENST00000473843 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
MACF1-215ENST00000473843 ADGRB2O60241 1585 aa17.3■□□□□ 0.36
MACF1-215ENST00000473843 CLTCL1P53675 1640 aa17.29■□□□□ 0.36
MACF1-215ENST00000473843 NRAPQ86VF7 1730 aa17.28■□□□□ 0.36
MACF1-215ENST00000473843 A0A0G2JS52 829 aa17.28■□□□□ 0.36
MACF1-215ENST00000473843 MYT1Q01538 1121 aa17.28■□□□□ 0.36
MACF1-215ENST00000473843 CCDC144AA2RUR9 1427 aa17.28■□□□□ 0.36
MACF1-215ENST00000473843 NUP155O75694 1391 aa17.28■□□□□ 0.36
MACF1-215ENST00000473843 FAM50AQ14320 339 aaKnown RBP17.26■□□□□ 0.35
MACF1-215ENST00000473843 HAP1P54257 671 aaPredicted RBP17.25■□□□□ 0.35
MACF1-215ENST00000473843 RREB1Q92766 1687 aa17.25■□□□□ 0.35
MACF1-215ENST00000473843 FMN2Q9NZ56 1722 aa17.24■□□□□ 0.35
MACF1-215ENST00000473843 NAIPQ13075 1403 aa17.24■□□□□ 0.35
MACF1-215ENST00000473843 APLP2Q06481 763 aa17.24■□□□□ 0.35
MACF1-215ENST00000473843 TNS3Q68CZ2 1445 aa17.23■□□□□ 0.35
MACF1-215ENST00000473843 EZH2Q15910 746 aaKnown RBP17.23■□□□□ 0.35
MACF1-215ENST00000473843 FAM98CQ17RN3 349 aaKnown RBP17.23■□□□□ 0.35
MACF1-215ENST00000473843 NUP188Q5SRE5 1749 aa17.23■□□□□ 0.35
MACF1-215ENST00000473843 NINLQ9Y2I6 1382 aa17.23■□□□□ 0.35
MACF1-215ENST00000473843 THSD7AQ9UPZ6 1657 aa17.23■□□□□ 0.35
MACF1-215ENST00000473843 ROCK1Q13464 1354 aa17.22■□□□□ 0.35
MACF1-215ENST00000473843 PARD3Q8TEW0 1356 aa17.22■□□□□ 0.35
MACF1-215ENST00000473843 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.35
MACF1-215ENST00000473843 SENP3-EIF4A1A0A087X0R7 540 aa17.2■□□□□ 0.34
MACF1-215ENST00000473843 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
MACF1-215ENST00000473843 CAMKK2Q96RR4 588 aa17.2■□□□□ 0.34
MACF1-215ENST00000473843 FAM182BQ5T319 152 aa17.19■□□□□ 0.34
MACF1-215ENST00000473843 KRT28Q7Z3Y7 464 aa17.19■□□□□ 0.34
MACF1-215ENST00000473843 CABLES1Q8TDN4 633 aa17.19■□□□□ 0.34
MACF1-215ENST00000473843 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
MACF1-215ENST00000473843 RGPD8O14715 1765 aaPredicted RBP17.19■□□□□ 0.34
MACF1-215ENST00000473843 PPLO60437 1756 aa17.19■□□□□ 0.34
MACF1-215ENST00000473843 NUTM2FA1L443 756 aa17.18■□□□□ 0.34
MACF1-215ENST00000473843 COL14A1Q05707 1796 aaKnown RBP17.17■□□□□ 0.34
MACF1-215ENST00000473843 CHD4Q14839 1912 aa17.17■□□□□ 0.34
MACF1-215ENST00000473843 ZNF784Q8NCA9 323 aaPredicted RBP17.17■□□□□ 0.34
MACF1-215ENST00000473843 FAM83GA6ND36 823 aa17.16■□□□□ 0.34
MACF1-215ENST00000473843 SPON1Q9HCB6 807 aa17.16■□□□□ 0.34
MACF1-215ENST00000473843 KNDC1Q76NI1 1749 aa17.16■□□□□ 0.34
MACF1-215ENST00000473843 IFT172Q9UG01 1749 aa17.16■□□□□ 0.34
MACF1-215ENST00000473843 ARHGEF10O15013 1369 aa17.15■□□□□ 0.34
MACF1-215ENST00000473843 TECPR2O15040 1411 aa17.15■□□□□ 0.34
MACF1-215ENST00000473843 SBNO1A3KN83 1393 aa17.15■□□□□ 0.34
MACF1-215ENST00000473843 PSME1Q06323 249 aa17.14■□□□□ 0.33
MACF1-215ENST00000473843 SPATA31A5Q5VU36 1347 aa17.13■□□□□ 0.33
MACF1-215ENST00000473843 SPATA31A7Q8IWB4 1347 aa17.13■□□□□ 0.33
MACF1-215ENST00000473843 KCNQ2O43526 872 aa17.12■□□□□ 0.33
MACF1-215ENST00000473843 PLEKHG5O94827 1062 aa17.12■□□□□ 0.33
MACF1-215ENST00000473843 TRIM37O94972 964 aa17.12■□□□□ 0.33
MACF1-215ENST00000473843 NBPF8Q3BBV2 869 aa17.12■□□□□ 0.33
MACF1-215ENST00000473843 NBPF14Q5TI25 921 aa17.12■□□□□ 0.33
MACF1-215ENST00000473843 BTG4Q9NY30 223 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms