RNA–Protein interactions for RNA: ENST00000473662.1

AMMECR1-204, Transcript of Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1, humanhuman

TSL 3

Gene AMMECR1, Length 418 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMMECR1-204ENST00000473662 POGKQ9P215 609 aa17.1■□□□□ 0.33
AMMECR1-204ENST00000473662 NCOA3Q9Y6Q9 1424 aa17.1■□□□□ 0.33
AMMECR1-204ENST00000473662 ADGRL3Q9HAR2 1447 aa17.09■□□□□ 0.33
AMMECR1-204ENST00000473662 IQSEC2Q5JU85 1478 aa17.09■□□□□ 0.33
AMMECR1-204ENST00000473662 MSH6P52701 1360 aa17.07■□□□□ 0.32
AMMECR1-204ENST00000473662 C19orf44Q9H6X5 657 aa17.07■□□□□ 0.32
AMMECR1-204ENST00000473662 MINK1Q8N4C8 1332 aaPredicted RBP17.06■□□□□ 0.32
AMMECR1-204ENST00000473662 CENPJQ9HC77 1338 aaPredicted RBP17.05■□□□□ 0.32
AMMECR1-204ENST00000473662 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
AMMECR1-204ENST00000473662 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
AMMECR1-204ENST00000473662 USP47Q96K76 1375 aa17.02■□□□□ 0.32
AMMECR1-204ENST00000473662 UBAP1LF5GYI3 381 aa17.02■□□□□ 0.32
AMMECR1-204ENST00000473662 CDC42BPGQ6DT37 1551 aa17.02■□□□□ 0.31
AMMECR1-204ENST00000473662 EIF3AQ14152 1382 aaKnown RBP17.02■□□□□ 0.31
AMMECR1-204ENST00000473662 ATF3P18847 181 aa17.01■□□□□ 0.31
AMMECR1-204ENST00000473662 DCCP43146 1447 aa17.01■□□□□ 0.31
AMMECR1-204ENST00000473662 ADGRB2O60241 1585 aa17.01■□□□□ 0.31
AMMECR1-204ENST00000473662 ST20-MTHFSA0A0A6YYL1 179 aa17■□□□□ 0.31
AMMECR1-204ENST00000473662 CADPS2Q86UW7 1296 aa17■□□□□ 0.31
AMMECR1-204ENST00000473662 FMN2Q9NZ56 1722 aa16.99■□□□□ 0.31
AMMECR1-204ENST00000473662 MST1RQ04912 1400 aa16.99■□□□□ 0.31
AMMECR1-204ENST00000473662 NUTM2FA1L443 756 aa16.99■□□□□ 0.31
AMMECR1-204ENST00000473662 TOM1O60784 492 aa16.98■□□□□ 0.31
AMMECR1-204ENST00000473662 SLAIN2Q9P270 581 aa16.98■□□□□ 0.31
AMMECR1-204ENST00000473662 TULP4Q9NRJ4 1543 aa16.97■□□□□ 0.31
AMMECR1-204ENST00000473662 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
AMMECR1-204ENST00000473662 PIP4K2BP78356 416 aa16.97■□□□□ 0.31
AMMECR1-204ENST00000473662 TESK2Q96S53 571 aa16.97■□□□□ 0.31
AMMECR1-204ENST00000473662 HSPA5P11021 654 aaKnown RBP16.96■□□□□ 0.31
AMMECR1-204ENST00000473662 CDK19Q9BWU1 502 aa16.96■□□□□ 0.31
AMMECR1-204ENST00000473662 C1orf167Q5SNV9 1468 aa16.96■□□□□ 0.31
AMMECR1-204ENST00000473662 RGPD8O14715 1765 aaPredicted RBP16.96■□□□□ 0.31
AMMECR1-204ENST00000473662 USP32Q8NFA0 1604 aa16.96■□□□□ 0.3
AMMECR1-204ENST00000473662 PRR36Q9H6K5 1346 aa16.95■□□□□ 0.3
AMMECR1-204ENST00000473662 SCAF1Q9H7N4 1312 aaKnown RBP16.95■□□□□ 0.3
AMMECR1-204ENST00000473662 SBNO2Q9Y2G9 1366 aa16.94■□□□□ 0.3
AMMECR1-204ENST00000473662 ZEB1P37275 1124 aaPredicted RBP16.93■□□□□ 0.3
AMMECR1-204ENST00000473662 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
AMMECR1-204ENST00000473662 ORAI2Q96SN7 254 aa16.93■□□□□ 0.3
AMMECR1-204ENST00000473662 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
AMMECR1-204ENST00000473662 ROBO1Q9Y6N7 1651 aa16.93■□□□□ 0.3
AMMECR1-204ENST00000473662 FBXO41Q8TF61 875 aa16.92■□□□□ 0.3
AMMECR1-204ENST00000473662 BRINP3Q76B58 766 aa16.91■□□□□ 0.3
AMMECR1-204ENST00000473662 ATP7BP35670 1465 aa16.91■□□□□ 0.3
AMMECR1-204ENST00000473662 EVC2Q86UK5 1308 aa16.91■□□□□ 0.3
AMMECR1-204ENST00000473662 ANKARQ7Z5J8 1434 aa16.9■□□□□ 0.3
AMMECR1-204ENST00000473662 SRPK2P78362 688 aaKnown RBP16.9■□□□□ 0.3
AMMECR1-204ENST00000473662 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
AMMECR1-204ENST00000473662 DISP3Q9P2K9 1392 aa16.89■□□□□ 0.3
AMMECR1-204ENST00000473662 ESCO1Q5FWF5 840 aa16.89■□□□□ 0.29
AMMECR1-204ENST00000473662 DDX17Q92841 729 aaKnown RBP16.88■□□□□ 0.29
AMMECR1-204ENST00000473662 TOPAZ1Q8N9V7 1692 aa16.87■□□□□ 0.29
AMMECR1-204ENST00000473662 TMF1P82094 1093 aa16.85■□□□□ 0.29
AMMECR1-204ENST00000473662 PMFBP1Q8TBY8 1022 aa16.85■□□□□ 0.29
AMMECR1-204ENST00000473662 PHF8Q9UPP1 1060 aa16.85■□□□□ 0.29
AMMECR1-204ENST00000473662 ITSN1Q15811 1721 aa16.84■□□□□ 0.29
AMMECR1-204ENST00000473662 C11orf95C9JLR9 678 aaPredicted RBP16.84■□□□□ 0.29
AMMECR1-204ENST00000473662 CCDC61Q9Y6R9 512 aa16.84■□□□□ 0.29
AMMECR1-204ENST00000473662 NHSL1Q5SYE7 1610 aa16.84■□□□□ 0.29
AMMECR1-204ENST00000473662 FOXO3O43524 673 aa16.83■□□□□ 0.28
AMMECR1-204ENST00000473662 HSPA1LP34931 641 aa16.83■□□□□ 0.28
AMMECR1-204ENST00000473662 KIF1AQ12756 1690 aa16.83■□□□□ 0.28
AMMECR1-204ENST00000473662 PPIP5K1Q6PFW1 1433 aa16.83■□□□□ 0.28
AMMECR1-204ENST00000473662 XPCQ01831 940 aaPredicted RBP16.82■□□□□ 0.28
AMMECR1-204ENST00000473662 ILDR1Q86SU0 546 aaPredicted RBP16.82■□□□□ 0.28
AMMECR1-204ENST00000473662 CABP1Q9NZU7 370 aa16.82■□□□□ 0.28
AMMECR1-204ENST00000473662 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
AMMECR1-204ENST00000473662 AHDC1Q5TGY3 1603 aaPredicted RBP16.81■□□□□ 0.28
AMMECR1-204ENST00000473662 ATAD2Q6PL18 1390 aa16.81■□□□□ 0.28
AMMECR1-204ENST00000473662 SLC24A1O60721 1099 aa16.81■□□□□ 0.28
AMMECR1-204ENST00000473662 PLEKHG3A1L390 1219 aa16.8■□□□□ 0.28
AMMECR1-204ENST00000473662 PUS7Q96PZ0 661 aaKnown RBP16.8■□□□□ 0.28
AMMECR1-204ENST00000473662 ACEP12821 1306 aa16.79■□□□□ 0.28
AMMECR1-204ENST00000473662 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
AMMECR1-204ENST00000473662 SLC12A5Q9H2X9 1139 aa16.79■□□□□ 0.28
AMMECR1-204ENST00000473662 PXDNQ92626 1479 aa16.79■□□□□ 0.28
AMMECR1-204ENST00000473662 NGDNQ8NEJ9 315 aaKnown RBP16.78■□□□□ 0.28
AMMECR1-204ENST00000473662 TMC1Q8TDI8 760 aa16.78■□□□□ 0.28
AMMECR1-204ENST00000473662 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
AMMECR1-204ENST00000473662 POLR3AO14802 1390 aaPredicted RBP16.77■□□□□ 0.28
AMMECR1-204ENST00000473662 SOS2Q07890 1332 aaPredicted RBP16.77■□□□□ 0.28
AMMECR1-204ENST00000473662 NPHP3Q7Z494 1330 aa16.77■□□□□ 0.28
AMMECR1-204ENST00000473662 MYOM1P52179 1685 aa16.76■□□□□ 0.27
AMMECR1-204ENST00000473662 CD163L1Q9NR16 1453 aa16.76■□□□□ 0.27
AMMECR1-204ENST00000473662 CDCA8Q53HL2 280 aa16.76■□□□□ 0.27
AMMECR1-204ENST00000473662 KRT28Q7Z3Y7 464 aa16.76■□□□□ 0.27
AMMECR1-204ENST00000473662 KIF7Q2M1P5 1343 aa16.75■□□□□ 0.27
AMMECR1-204ENST00000473662 PSME1Q06323 249 aa16.75■□□□□ 0.27
AMMECR1-204ENST00000473662 AKAP12Q02952 1782 aa16.74■□□□□ 0.27
AMMECR1-204ENST00000473662 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
AMMECR1-204ENST00000473662 CPSF1Q10570 1443 aaKnown RBP16.73■□□□□ 0.27
AMMECR1-204ENST00000473662 WASHC2AQ641Q2 1341 aa16.72■□□□□ 0.27
AMMECR1-204ENST00000473662 A0A1W2PP64 1363 aa16.72■□□□□ 0.27
AMMECR1-204ENST00000473662 CCDC7Q96M83 1385 aa16.72■□□□□ 0.27
AMMECR1-204ENST00000473662 USP6P35125 1406 aa16.71■□□□□ 0.27
AMMECR1-204ENST00000473662 NINLQ9Y2I6 1382 aa16.71■□□□□ 0.27
AMMECR1-204ENST00000473662 MON2Q7Z3U7 1717 aa16.7■□□□□ 0.26
AMMECR1-204ENST00000473662 SBNO1A3KN83 1393 aa16.7■□□□□ 0.26
AMMECR1-204ENST00000473662 SSH2Q76I76 1423 aa16.7■□□□□ 0.26
AMMECR1-204ENST00000473662 SPATA31A3Q5VYP0 1347 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms