RNA–Protein interactions for RNA: ENST00000473562.1

NOTCH4-203, Transcript of notch 4, humanhuman

TSL 1 (best)

Gene NOTCH4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-203ENST00000473562 SCAPERQ9BY12 1400 aa16.76■□□□□ 0.27
NOTCH4-203ENST00000473562 CLTCL1P53675 1640 aa16.76■□□□□ 0.27
NOTCH4-203ENST00000473562 SYNMO15061 1565 aa16.76■□□□□ 0.27
NOTCH4-203ENST00000473562 C22orf23Q9BZE7 217 aa16.76■□□□□ 0.27
NOTCH4-203ENST00000473562 LNPKQ9C0E8 428 aa16.76■□□□□ 0.27
NOTCH4-203ENST00000473562 RNF17Q9BXT8 1623 aaKnown RBP16.75■□□□□ 0.27
NOTCH4-203ENST00000473562 FAM43AQ8N2R8 423 aa16.75■□□□□ 0.27
NOTCH4-203ENST00000473562 RWDD1Q9H446 243 aaPredicted RBP16.75■□□□□ 0.27
NOTCH4-203ENST00000473562 C1orf115Q9H7X2 142 aa16.75■□□□□ 0.27
NOTCH4-203ENST00000473562 IQGAP1P46940 1657 aa16.74■□□□□ 0.27
NOTCH4-203ENST00000473562 ELL2O00472 640 aaPredicted RBP16.74■□□□□ 0.27
NOTCH4-203ENST00000473562 LAMC1P11047 1609 aa16.74■□□□□ 0.27
NOTCH4-203ENST00000473562 TRIM27P14373 513 aa16.73■□□□□ 0.27
NOTCH4-203ENST00000473562 DZIP1LQ8IYY4 767 aaKnown RBP16.73■□□□□ 0.27
NOTCH4-203ENST00000473562 SSH1Q8WYL5 1049 aa16.73■□□□□ 0.27
NOTCH4-203ENST00000473562 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
NOTCH4-203ENST00000473562 NAP1L5Q96NT1 182 aaPredicted RBP16.73■□□□□ 0.27
NOTCH4-203ENST00000473562 MCM4P33991 863 aa16.73■□□□□ 0.27
NOTCH4-203ENST00000473562 ABCC2Q92887 1545 aa16.72■□□□□ 0.27
NOTCH4-203ENST00000473562 GOLGA6L3A6NEY3 463 aa16.72■□□□□ 0.27
NOTCH4-203ENST00000473562 NOB1Q9ULX3 412 aaKnown RBP16.72■□□□□ 0.27
NOTCH4-203ENST00000473562 ZKSCAN2Q63HK3 967 aa16.71■□□□□ 0.27
NOTCH4-203ENST00000473562 NOS1P29475 1434 aa16.71■□□□□ 0.27
NOTCH4-203ENST00000473562 TRAK2O60296 914 aa16.71■□□□□ 0.26
NOTCH4-203ENST00000473562 PLCH2O75038 1416 aa16.71■□□□□ 0.26
NOTCH4-203ENST00000473562 THUMPD2Q9BTF0 503 aaKnown RBP16.71■□□□□ 0.26
NOTCH4-203ENST00000473562 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
NOTCH4-203ENST00000473562 KDM5AP29375 1690 aaKnown RBP16.69■□□□□ 0.26
NOTCH4-203ENST00000473562 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
NOTCH4-203ENST00000473562 CFAP53Q96M91 514 aa16.68■□□□□ 0.26
NOTCH4-203ENST00000473562 POLR3AO14802 1390 aaPredicted RBP16.68■□□□□ 0.26
NOTCH4-203ENST00000473562 KANK1Q14678 1352 aa16.68■□□□□ 0.26
NOTCH4-203ENST00000473562 CHD1O14646 1710 aa16.68■□□□□ 0.26
NOTCH4-203ENST00000473562 CEP152O94986 1710 aa16.68■□□□□ 0.26
NOTCH4-203ENST00000473562 PLXNC1O60486 1568 aa16.67■□□□□ 0.26
NOTCH4-203ENST00000473562 CLASP1Q7Z460 1538 aa16.67■□□□□ 0.26
NOTCH4-203ENST00000473562 MYH16Q9H6N6 1097 aa16.67■□□□□ 0.26
NOTCH4-203ENST00000473562 PTPRTO14522 1441 aa16.66■□□□□ 0.26
NOTCH4-203ENST00000473562 SRPK2P78362 688 aaKnown RBP16.66■□□□□ 0.26
NOTCH4-203ENST00000473562 NPC1L1Q9UHC9 1359 aa16.66■□□□□ 0.26
NOTCH4-203ENST00000473562 CD2BP2O95400 341 aaKnown RBP16.66■□□□□ 0.26
NOTCH4-203ENST00000473562 TRPM2O94759 1503 aa16.65■□□□□ 0.26
NOTCH4-203ENST00000473562 SPHKAPQ2M3C7 1700 aa16.65■□□□□ 0.26
NOTCH4-203ENST00000473562 HSP90AA1P07900 732 aaKnown RBP16.64■□□□□ 0.25
NOTCH4-203ENST00000473562 L1TD1Q5T7N2 865 aaKnown RBP16.64■□□□□ 0.25
NOTCH4-203ENST00000473562 WDR63Q8IWG1 891 aa16.64■□□□□ 0.25
NOTCH4-203ENST00000473562 HSCBQ8IWL3 235 aa16.64■□□□□ 0.25
NOTCH4-203ENST00000473562 RSPH6AQ9H0K4 717 aa16.64■□□□□ 0.25
NOTCH4-203ENST00000473562 RIPK4P57078 832 aa16.64■□□□□ 0.25
NOTCH4-203ENST00000473562 MINK1Q8N4C8 1332 aaPredicted RBP16.64■□□□□ 0.25
NOTCH4-203ENST00000473562 ABCA6Q8N139 1617 aa16.63■□□□□ 0.25
NOTCH4-203ENST00000473562 TRIM35Q9UPQ4 493 aa16.63■□□□□ 0.25
NOTCH4-203ENST00000473562 TMPOP42166 694 aaKnown RBP16.63■□□□□ 0.25
NOTCH4-203ENST00000473562 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
NOTCH4-203ENST00000473562 APBB1O00213 710 aa16.62■□□□□ 0.25
NOTCH4-203ENST00000473562 HMOX1P09601 288 aa16.62■□□□□ 0.25
NOTCH4-203ENST00000473562 ANKRD45Q5TZF3 282 aa16.62■□□□□ 0.25
NOTCH4-203ENST00000473562 ATF7IPQ6VMQ6 1270 aa16.62■□□□□ 0.25
NOTCH4-203ENST00000473562 GAS2L3Q86XJ1 694 aa16.62■□□□□ 0.25
NOTCH4-203ENST00000473562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.62■□□□□ 0.25
NOTCH4-203ENST00000473562 PHF23Q9BUL5 403 aaPredicted RBP16.61■□□□□ 0.25
NOTCH4-203ENST00000473562 ABCC1P33527 1531 aa16.61■□□□□ 0.25
NOTCH4-203ENST00000473562 HSP90AB1P08238 724 aaKnown RBP16.61■□□□□ 0.25
NOTCH4-203ENST00000473562 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
NOTCH4-203ENST00000473562 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
NOTCH4-203ENST00000473562 ATAD2Q6PL18 1390 aa16.6■□□□□ 0.25
NOTCH4-203ENST00000473562 TNPO1Q92973 898 aaKnown RBP16.6■□□□□ 0.25
NOTCH4-203ENST00000473562 VIRMAQ69YN4 1812 aaKnown RBP16.6■□□□□ 0.25
NOTCH4-203ENST00000473562 UBE2Q2Q8WVN8 375 aa16.59■□□□□ 0.25
NOTCH4-203ENST00000473562 SHPRHQ149N8 1683 aa16.58■□□□□ 0.25
NOTCH4-203ENST00000473562 CHAMP1Q96JM3 812 aa16.58■□□□□ 0.24
NOTCH4-203ENST00000473562 RTEL1-TNFRSF6BF6WH68 1400 aa16.58■□□□□ 0.24
NOTCH4-203ENST00000473562 CD109Q6YHK3 1445 aa16.58■□□□□ 0.24
NOTCH4-203ENST00000473562 ZFYVE16Q7Z3T8 1539 aa16.57■□□□□ 0.24
NOTCH4-203ENST00000473562 FSD2A1L4K1 749 aa16.57■□□□□ 0.24
NOTCH4-203ENST00000473562 TSPYL6Q8N831 410 aa16.57■□□□□ 0.24
NOTCH4-203ENST00000473562 GRPEL1Q9HAV7 217 aa16.57■□□□□ 0.24
NOTCH4-203ENST00000473562 NINLQ9Y2I6 1382 aa16.57■□□□□ 0.24
NOTCH4-203ENST00000473562 DDX19BQ9UMR2 479 aa16.57■□□□□ 0.24
NOTCH4-203ENST00000473562 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
NOTCH4-203ENST00000473562 C14orf93Q9H972 538 aaKnown RBP16.56■□□□□ 0.24
NOTCH4-203ENST00000473562 ZNF518AQ6AHZ1 1483 aa16.56■□□□□ 0.24
NOTCH4-203ENST00000473562 ZNF692Q9BU19 519 aaPredicted RBP16.56■□□□□ 0.24
NOTCH4-203ENST00000473562 MAP3K4Q9Y6R4 1608 aa16.55■□□□□ 0.24
NOTCH4-203ENST00000473562 ZBTB7CA1YPR0 619 aa16.55■□□□□ 0.24
NOTCH4-203ENST00000473562 NGEFQ8N5V2 710 aa16.55■□□□□ 0.24
NOTCH4-203ENST00000473562 ZBTB40Q9NUA8 1239 aa16.55■□□□□ 0.24
NOTCH4-203ENST00000473562 FANCAO15360 1455 aa16.55■□□□□ 0.24
NOTCH4-203ENST00000473562 ZCCHC11Q5TAX3 1644 aaKnown RBP16.55■□□□□ 0.24
NOTCH4-203ENST00000473562 SSFA2P28290 1259 aa16.54■□□□□ 0.24
NOTCH4-203ENST00000473562 FOXD4L5Q5VV16 416 aaPredicted RBP16.54■□□□□ 0.24
NOTCH4-203ENST00000473562 FOXD4L4Q8WXT5 416 aaPredicted RBP16.54■□□□□ 0.24
NOTCH4-203ENST00000473562 PLEKHF1Q96S99 279 aa16.54■□□□□ 0.24
NOTCH4-203ENST00000473562 MROH2AA6NES4 1674 aa16.54■□□□□ 0.24
NOTCH4-203ENST00000473562 NCLP19338 710 aaKnown RBP16.54■□□□□ 0.24
NOTCH4-203ENST00000473562 CHD1LQ86WJ1 897 aa16.54■□□□□ 0.24
NOTCH4-203ENST00000473562 PHACTR3Q96KR7 559 aa16.54■□□□□ 0.24
NOTCH4-203ENST00000473562 EVC2Q86UK5 1308 aa16.53■□□□□ 0.24
NOTCH4-203ENST00000473562 PRKAR2BP31323 418 aa16.53■□□□□ 0.24
NOTCH4-203ENST00000473562 DCTN1Q14203 1278 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms