RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 RETREG3Q86VR2 466 aa10.03□□□□□ -0.8
CNOT4-209ENST00000473470 HLA-CQ95604 372 aa10.02□□□□□ -0.81
CNOT4-209ENST00000473470 USB1Q9BQ65 265 aaKnown RBP10.02□□□□□ -0.81
CNOT4-209ENST00000473470 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.02□□□□□ -0.81
CNOT4-209ENST00000473470 GUCA2AQ02747 115 aa10.01□□□□□ -0.81
CNOT4-209ENST00000473470 PRPF38BQ5VTL8 546 aaKnown RBP10.01□□□□□ -0.81
CNOT4-209ENST00000473470 NKX2-3Q8TAU0 364 aa10.01□□□□□ -0.81
CNOT4-209ENST00000473470 FAM117AQ9C073 453 aa10.01□□□□□ -0.81
CNOT4-209ENST00000473470 C6orf229H3BNL8 230 aa10□□□□□ -0.81
CNOT4-209ENST00000473470 S1PR4O95977 384 aa10□□□□□ -0.81
CNOT4-209ENST00000473470 MTMR2Q13614 643 aa10□□□□□ -0.81
CNOT4-209ENST00000473470 PPP1R18Q6NYC8 613 aa10□□□□□ -0.81
CNOT4-209ENST00000473470 RIC3Q7Z5B4 369 aa10□□□□□ -0.81
CNOT4-209ENST00000473470 ZBTB3Q9H5J0 574 aa10□□□□□ -0.81
CNOT4-209ENST00000473470 NDUFV2P19404 249 aa9.99□□□□□ -0.81
CNOT4-209ENST00000473470 ANKLE1Q8NAG6 615 aa9.99□□□□□ -0.81
CNOT4-209ENST00000473470 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
CNOT4-209ENST00000473470 PCDHGC3Q9UN70 934 aa9.98□□□□□ -0.81
CNOT4-209ENST00000473470 PLEKHG3A1L390 1219 aa9.97□□□□□ -0.81
CNOT4-209ENST00000473470 MMP16P51512 607 aa9.96□□□□□ -0.82
CNOT4-209ENST00000473470 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.82
CNOT4-209ENST00000473470 RNF223E7ERA6 249 aa9.95□□□□□ -0.82
CNOT4-209ENST00000473470 DXOO77932 396 aaKnown RBP9.95□□□□□ -0.82
CNOT4-209ENST00000473470 JUNDP17535 347 aa9.95□□□□□ -0.82
CNOT4-209ENST00000473470 PRDM9Q9NQV7 894 aa9.95□□□□□ -0.82
CNOT4-209ENST00000473470 LIMD1Q9UGP4 676 aa9.95□□□□□ -0.82
CNOT4-209ENST00000473470 DESI1Q6ICB0 168 aa9.94□□□□□ -0.82
CNOT4-209ENST00000473470 FAM160A2Q8N612 972 aaPredicted RBP9.94□□□□□ -0.82
CNOT4-209ENST00000473470 HRCP23327 699 aa9.92□□□□□ -0.82
CNOT4-209ENST00000473470 HELBQ8NG08 1087 aaPredicted RBP9.92□□□□□ -0.82
CNOT4-209ENST00000473470 PCMTD1Q96MG8 357 aaPredicted RBP9.92□□□□□ -0.82
CNOT4-209ENST00000473470 FCF1Q9Y324 198 aaKnown RBP9.92□□□□□ -0.82
CNOT4-209ENST00000473470 V9GY48 417 aaPredicted RBP9.92□□□□□ -0.82
CNOT4-209ENST00000473470 NUTM2BA6NNL0 878 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-209ENST00000473470 NUTM2EB1AL46 878 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-209ENST00000473470 CSPP1Q1MSJ5 1256 aa9.91□□□□□ -0.82
CNOT4-209ENST00000473470 NUTM2DQ5VT03 806 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-209ENST00000473470 NUTM2AQ8IVF1 878 aaPredicted RBP9.91□□□□□ -0.82
CNOT4-209ENST00000473470 PRR7Q8TB68 274 aa9.91□□□□□ -0.82
CNOT4-209ENST00000473470 LILRB3O75022 631 aa9.9□□□□□ -0.82
CNOT4-209ENST00000473470 PTPRNQ16849 979 aa9.9□□□□□ -0.82
CNOT4-209ENST00000473470 SYMPKQ92797 1274 aaKnown RBP9.9□□□□□ -0.82
CNOT4-209ENST00000473470 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
CNOT4-209ENST00000473470 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.89□□□□□ -0.83
CNOT4-209ENST00000473470 ATP1B4Q9UN42 357 aaPredicted RBP9.89□□□□□ -0.83
CNOT4-209ENST00000473470 PCDHB15Q9Y5E8 787 aa9.89□□□□□ -0.83
CNOT4-209ENST00000473470 IL27Q8NEV9 243 aa9.88□□□□□ -0.83
CNOT4-209ENST00000473470 CABLES1Q8TDN4 633 aa9.88□□□□□ -0.83
CNOT4-209ENST00000473470 NUDT12Q9BQG2 462 aa9.88□□□□□ -0.83
CNOT4-209ENST00000473470 CCNYL3P0C7X3 344 aa9.87□□□□□ -0.83
CNOT4-209ENST00000473470 QPCTQ16769 361 aa9.87□□□□□ -0.83
CNOT4-209ENST00000473470 PRKD2Q9BZL6 878 aa9.87□□□□□ -0.83
CNOT4-209ENST00000473470 RPIAP49247 311 aa9.86□□□□□ -0.83
CNOT4-209ENST00000473470 PPP2R2DQ66LE6 453 aa9.86□□□□□ -0.83
CNOT4-209ENST00000473470 CFAP99D6REC4 459 aa9.85□□□□□ -0.83
CNOT4-209ENST00000473470 PPEF1O14829 653 aaPredicted RBP9.85□□□□□ -0.83
CNOT4-209ENST00000473470 ZBTB24O43167 697 aaPredicted RBP9.85□□□□□ -0.83
CNOT4-209ENST00000473470 SLC19A1P41440 591 aa9.84□□□□□ -0.83
CNOT4-209ENST00000473470 TSC1Q92574 1164 aa9.83□□□□□ -0.84
CNOT4-209ENST00000473470 PLA2G2CQ5R387 149 aa9.82□□□□□ -0.84
CNOT4-209ENST00000473470 CCDC24Q8N4L8 307 aa9.82□□□□□ -0.84
CNOT4-209ENST00000473470 LYPD8Q6UX82 237 aa9.81□□□□□ -0.84
CNOT4-209ENST00000473470 TRIM32Q13049 653 aa9.8□□□□□ -0.84
CNOT4-209ENST00000473470 SPRYD7Q5W111 196 aa9.8□□□□□ -0.84
CNOT4-209ENST00000473470 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
CNOT4-209ENST00000473470 CD2BP2O95400 341 aaKnown RBP9.79□□□□□ -0.84
CNOT4-209ENST00000473470 RTL5Q5HYW3 569 aaPredicted RBP9.79□□□□□ -0.84
CNOT4-209ENST00000473470 ZNF598Q86UK7 904 aaKnown RBP9.79□□□□□ -0.84
CNOT4-209ENST00000473470 RFC5P40937 340 aa9.78□□□□□ -0.84
CNOT4-209ENST00000473470 ZNF697Q5TEC3 545 aa9.78□□□□□ -0.84
CNOT4-209ENST00000473470 EVA1BQ9NVM1 165 aa9.78□□□□□ -0.84
CNOT4-209ENST00000473470 F12P00748 615 aaPredicted RBP9.77□□□□□ -0.85
CNOT4-209ENST00000473470 KCNH2Q12809 1159 aa9.77□□□□□ -0.85
CNOT4-209ENST00000473470 TMEM259Q4ZIN3 620 aa9.77□□□□□ -0.85
CNOT4-209ENST00000473470 LIAT1Q6ZQX7 453 aa9.77□□□□□ -0.85
CNOT4-209ENST00000473470 CTHP32929 405 aa9.76□□□□□ -0.85
CNOT4-209ENST00000473470 WNT7BP56706 349 aa9.76□□□□□ -0.85
CNOT4-209ENST00000473470 LAPTM4AQ15012 233 aa9.76□□□□□ -0.85
CNOT4-209ENST00000473470 UNC93B1Q9H1C4 597 aa9.76□□□□□ -0.85
CNOT4-209ENST00000473470 APBB1O00213 710 aa9.75□□□□□ -0.85
CNOT4-209ENST00000473470 PNMA1Q8ND90 353 aa9.75□□□□□ -0.85
CNOT4-209ENST00000473470 ARMC2Q8NEN0 867 aa9.75□□□□□ -0.85
CNOT4-209ENST00000473470 EMID1Q96A84 441 aaPredicted RBP9.75□□□□□ -0.85
CNOT4-209ENST00000473470 SOCS7O14512 581 aa9.74□□□□□ -0.85
CNOT4-209ENST00000473470 AP1G2O75843 785 aa9.74□□□□□ -0.85
CNOT4-209ENST00000473470 USP17L8P0C7I0 530 aa9.74□□□□□ -0.85
CNOT4-209ENST00000473470 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
CNOT4-209ENST00000473470 IRX2Q9BZI1 471 aaPredicted RBP9.74□□□□□ -0.85
CNOT4-209ENST00000473470 PRR20EP86478 221 aa9.73□□□□□ -0.85
CNOT4-209ENST00000473470 PRR20CP86479 221 aa9.73□□□□□ -0.85
CNOT4-209ENST00000473470 PRR20DP86480 221 aa9.73□□□□□ -0.85
CNOT4-209ENST00000473470 PRR20BP86481 221 aa9.73□□□□□ -0.85
CNOT4-209ENST00000473470 PRR20AP86496 221 aa9.73□□□□□ -0.85
CNOT4-209ENST00000473470 PER1O15534 1290 aaPredicted RBP9.72□□□□□ -0.85
CNOT4-209ENST00000473470 TMEM132AQ24JP5 1023 aa9.72□□□□□ -0.85
CNOT4-209ENST00000473470 GPKOWQ92917 476 aaPredicted RBP eCLIP9.72□□□□□ -0.85
CNOT4-209ENST00000473470 MAP10Q9P2G4 905 aa9.72□□□□□ -0.85
CNOT4-209ENST00000473470 ZC3H4Q9UPT8 1303 aaKnown RBP9.72□□□□□ -0.85
CNOT4-209ENST00000473470 BANK1Q8NDB2 785 aa9.71□□□□□ -0.86
CNOT4-209ENST00000473470 WNT7AO00755 349 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms