RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 MYO5BQ9ULV0 1848 aa9.67□□□□□ -0.86
HDAC1-205ENST00000472928 RPRD2Q5VT52 1461 aaKnown RBP9.66□□□□□ -0.86
HDAC1-205ENST00000472928 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
HDAC1-205ENST00000472928 SETD5Q9C0A6 1442 aa9.66□□□□□ -0.86
HDAC1-205ENST00000472928 PPP1R15AO75807 674 aaPredicted RBP9.66□□□□□ -0.86
HDAC1-205ENST00000472928 ATF3P18847 181 aa9.66□□□□□ -0.86
HDAC1-205ENST00000472928 TMEM131LA2VDJ0 1609 aa9.66□□□□□ -0.86
HDAC1-205ENST00000472928 PTPN23Q9H3S7 1636 aa9.66□□□□□ -0.86
HDAC1-205ENST00000472928 EP400Q96L91 3159 aa9.66□□□□□ -0.86
HDAC1-205ENST00000472928 ASXL1Q8IXJ9 1541 aa9.66□□□□□ -0.86
HDAC1-205ENST00000472928 PIK3R4Q99570 1358 aa9.65□□□□□ -0.86
HDAC1-205ENST00000472928 ANKRD30AQ9BXX3 1397 aa9.65□□□□□ -0.86
HDAC1-205ENST00000472928 GCC2Q8IWJ2 1684 aa9.65□□□□□ -0.86
HDAC1-205ENST00000472928 NUBP1P53384 320 aa9.65□□□□□ -0.86
HDAC1-205ENST00000472928 RBM6P78332 1123 aaKnown RBP9.65□□□□□ -0.86
HDAC1-205ENST00000472928 REM2Q8IYK8 340 aaPredicted RBP9.65□□□□□ -0.86
HDAC1-205ENST00000472928 CHIC2Q9UKJ5 165 aa9.65□□□□□ -0.86
HDAC1-205ENST00000472928 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
HDAC1-205ENST00000472928 CLEC11AQ9Y240 323 aa9.64□□□□□ -0.87
HDAC1-205ENST00000472928 DCCP43146 1447 aa9.64□□□□□ -0.87
HDAC1-205ENST00000472928 MST1RQ04912 1400 aa9.64□□□□□ -0.87
HDAC1-205ENST00000472928 RRBP1Q9P2E9 1410 aaKnown RBP9.64□□□□□ -0.87
HDAC1-205ENST00000472928 PNPLA6Q8IY17 1366 aa9.63□□□□□ -0.87
HDAC1-205ENST00000472928 HDGFP51858 240 aaKnown RBP9.63□□□□□ -0.87
HDAC1-205ENST00000472928 GSE1Q14687 1217 aa9.63□□□□□ -0.87
HDAC1-205ENST00000472928 NUTM2DQ5VT03 806 aaPredicted RBP9.63□□□□□ -0.87
HDAC1-205ENST00000472928 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.63□□□□□ -0.87
HDAC1-205ENST00000472928 CREBZFQ9NS37 354 aa9.63□□□□□ -0.87
HDAC1-205ENST00000472928 NHSL1Q5SYE7 1610 aa9.63□□□□□ -0.87
HDAC1-205ENST00000472928 ADGRL2O95490 1459 aa9.62□□□□□ -0.87
HDAC1-205ENST00000472928 PRR29P0C7W0 189 aa9.62□□□□□ -0.87
HDAC1-205ENST00000472928 C8orf37Q96NL8 207 aa9.62□□□□□ -0.87
HDAC1-205ENST00000472928 AMOTL2Q9Y2J4 779 aa9.62□□□□□ -0.87
HDAC1-205ENST00000472928 MNX1P50219 401 aaPredicted RBP9.61□□□□□ -0.87
HDAC1-205ENST00000472928 PAXIP1Q6ZW49 1069 aaPredicted RBP9.61□□□□□ -0.87
HDAC1-205ENST00000472928 DDX17Q92841 729 aaKnown RBP9.61□□□□□ -0.87
HDAC1-205ENST00000472928 SETBP1Q9Y6X0 1596 aa9.61□□□□□ -0.87
HDAC1-205ENST00000472928 ATAD2Q6PL18 1390 aa9.61□□□□□ -0.87
HDAC1-205ENST00000472928 TRPM2O94759 1503 aa9.61□□□□□ -0.87
HDAC1-205ENST00000472928 XRN1Q8IZH2 1706 aaKnown RBP9.6□□□□□ -0.87
HDAC1-205ENST00000472928 UNC13BO14795 1591 aa9.6□□□□□ -0.87
HDAC1-205ENST00000472928 ANKRD50Q9ULJ7 1429 aa9.6□□□□□ -0.87
HDAC1-205ENST00000472928 VSIG10Q8N0Z9 540 aa9.6□□□□□ -0.87
HDAC1-205ENST00000472928 LRRC59Q96AG4 307 aaKnown RBP9.6□□□□□ -0.87
HDAC1-205ENST00000472928 CHGAP10645 457 aaKnown RBP9.59□□□□□ -0.87
HDAC1-205ENST00000472928 RNF25Q96BH1 459 aaPredicted RBP9.59□□□□□ -0.87
HDAC1-205ENST00000472928 NRXN3Q9Y4C0 1643 aa9.59□□□□□ -0.87
HDAC1-205ENST00000472928 ADAMTS2O95450 1211 aa9.58□□□□□ -0.88
HDAC1-205ENST00000472928 ZRANB1Q9UGI0 708 aa9.58□□□□□ -0.88
HDAC1-205ENST00000472928 ATRNO75882 1429 aa9.57□□□□□ -0.88
HDAC1-205ENST00000472928 ADGRL3Q9HAR2 1447 aa9.57□□□□□ -0.88
HDAC1-205ENST00000472928 NGLY1Q96IV0 654 aa9.57□□□□□ -0.88
HDAC1-205ENST00000472928 CFAP44Q96MT7 982 aa9.57□□□□□ -0.88
HDAC1-205ENST00000472928 E9PCH4 1651 aa9.56□□□□□ -0.88
HDAC1-205ENST00000472928 METP08581 1390 aa9.56□□□□□ -0.88
HDAC1-205ENST00000472928 FNBP4Q8N3X1 1017 aaPredicted RBP9.56□□□□□ -0.88
HDAC1-205ENST00000472928 C1orf167Q5SNV9 1468 aa9.55□□□□□ -0.88
HDAC1-205ENST00000472928 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
HDAC1-205ENST00000472928 DCAF8Q5TAQ9 597 aa9.55□□□□□ -0.88
HDAC1-205ENST00000472928 HS6ST3Q8IZP7 471 aa9.55□□□□□ -0.88
HDAC1-205ENST00000472928 USP21Q9UK80 565 aa9.55□□□□□ -0.88
HDAC1-205ENST00000472928 TRPC5Q9UL62 973 aaPredicted RBP9.55□□□□□ -0.88
HDAC1-205ENST00000472928 LAMC1P11047 1609 aa9.55□□□□□ -0.88
HDAC1-205ENST00000472928 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
HDAC1-205ENST00000472928 SPRYD3Q8NCJ5 442 aa9.54□□□□□ -0.88
HDAC1-205ENST00000472928 FAM212AQ96EL1 285 aa9.54□□□□□ -0.88
HDAC1-205ENST00000472928 PTCH1Q13635 1447 aa9.54□□□□□ -0.88
HDAC1-205ENST00000472928 NALCNQ8IZF0 1738 aa9.53□□□□□ -0.88
HDAC1-205ENST00000472928 FAM50AQ14320 339 aaKnown RBP9.52□□□□□ -0.89
HDAC1-205ENST00000472928 ORAI2Q96SN7 254 aa9.52□□□□□ -0.89
HDAC1-205ENST00000472928 KDM2AQ9Y2K7 1162 aa9.52□□□□□ -0.89
HDAC1-205ENST00000472928 IQGAP3Q86VI3 1631 aa9.52□□□□□ -0.89
HDAC1-205ENST00000472928 MYOM2P54296 1465 aa9.52□□□□□ -0.89
HDAC1-205ENST00000472928 BCL9LQ86UU0 1499 aa9.52□□□□□ -0.89
HDAC1-205ENST00000472928 CCDC125Q86Z20 511 aa9.51□□□□□ -0.89
HDAC1-205ENST00000472928 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
HDAC1-205ENST00000472928 COL22A1Q8NFW1 1626 aaPredicted RBP9.5□□□□□ -0.89
HDAC1-205ENST00000472928 RIOK3O14730 519 aaKnown RBP9.5□□□□□ -0.89
HDAC1-205ENST00000472928 ROBO2Q9HCK4 1378 aa9.49□□□□□ -0.89
HDAC1-205ENST00000472928 ITGAEP38570 1179 aa9.48□□□□□ -0.89
HDAC1-205ENST00000472928 GJD4Q96KN9 370 aaPredicted RBP9.48□□□□□ -0.89
HDAC1-205ENST00000472928 NUP155O75694 1391 aa9.48□□□□□ -0.89
HDAC1-205ENST00000472928 BLMP54132 1417 aaPredicted RBP9.48□□□□□ -0.89
HDAC1-205ENST00000472928 PRAG1Q86YV5 1406 aa9.48□□□□□ -0.89
HDAC1-205ENST00000472928 NEXMIFQ5QGS0 1516 aa9.47□□□□□ -0.89
HDAC1-205ENST00000472928 LRP5O75197 1615 aa9.47□□□□□ -0.89
HDAC1-205ENST00000472928 CHRM1P11229 460 aaPredicted RBP9.47□□□□□ -0.89
HDAC1-205ENST00000472928 DEFB132Q7Z7B7 95 aa9.47□□□□□ -0.89
HDAC1-205ENST00000472928 TSHZ2Q9NRE2 1034 aa9.47□□□□□ -0.89
HDAC1-205ENST00000472928 ROCK1Q13464 1354 aa9.47□□□□□ -0.89
HDAC1-205ENST00000472928 PXDNQ92626 1479 aa9.47□□□□□ -0.89
HDAC1-205ENST00000472928 GLI3P10071 1580 aa9.46□□□□□ -0.89
HDAC1-205ENST00000472928 ZNF326Q5BKZ1 582 aaKnown RBP9.46□□□□□ -0.9
HDAC1-205ENST00000472928 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
HDAC1-205ENST00000472928 RALGAPBQ86X10 1494 aa9.46□□□□□ -0.9
HDAC1-205ENST00000472928 SLIT2O94813 1529 aa9.45□□□□□ -0.9
HDAC1-205ENST00000472928 VGFO15240 615 aaPredicted RBP9.44□□□□□ -0.9
HDAC1-205ENST00000472928 SPHKAPQ2M3C7 1700 aa9.44□□□□□ -0.9
HDAC1-205ENST00000472928 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.44□□□□□ -0.9
HDAC1-205ENST00000472928 MARF1Q9Y4F3 1742 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms