RNA–Protein interactions for RNA: ENST00000472696.1

EPHA4-212, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 531 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-212ENST00000472696 TRAK1Q9UPV9 953 aa8.18□□□□□ -1.1
EPHA4-212ENST00000472696 AMOTL2Q9Y2J4 779 aa8.18□□□□□ -1.1
EPHA4-212ENST00000472696 HOMEZQ8IX15 550 aa8.17□□□□□ -1.1
EPHA4-212ENST00000472696 POGKQ9P215 609 aa8.17□□□□□ -1.1
EPHA4-212ENST00000472696 TPRNQ4KMQ1 711 aa8.16□□□□□ -1.1
EPHA4-212ENST00000472696 EVC2Q86UK5 1308 aa8.16□□□□□ -1.1
EPHA4-212ENST00000472696 POTEDQ86YR6 584 aa8.16□□□□□ -1.1
EPHA4-212ENST00000472696 PTPRUQ92729 1446 aa8.16□□□□□ -1.1
EPHA4-212ENST00000472696 TESK2Q96S53 571 aa8.16□□□□□ -1.1
EPHA4-212ENST00000472696 NINLQ9Y2I6 1382 aa8.15□□□□□ -1.1
EPHA4-212ENST00000472696 PRAM1Q96QH2 718 aa8.15□□□□□ -1.1
EPHA4-212ENST00000472696 QRICH2Q9H0J4 1663 aa8.14□□□□□ -1.11
EPHA4-212ENST00000472696 ADGRB2O60241 1585 aa8.14□□□□□ -1.11
EPHA4-212ENST00000472696 STK26Q9P289 416 aa8.14□□□□□ -1.11
EPHA4-212ENST00000472696 DCCP43146 1447 aa8.13□□□□□ -1.11
EPHA4-212ENST00000472696 ATAD2Q6PL18 1390 aa8.13□□□□□ -1.11
EPHA4-212ENST00000472696 ROBO2Q9HCK4 1378 aa8.13□□□□□ -1.11
EPHA4-212ENST00000472696 PLCB2Q00722 1185 aa8.13□□□□□ -1.11
EPHA4-212ENST00000472696 WASLO00401 505 aaPredicted RBP8.12□□□□□ -1.11
EPHA4-212ENST00000472696 C19orf44Q9H6X5 657 aa8.12□□□□□ -1.11
EPHA4-212ENST00000472696 ADGRL3Q9HAR2 1447 aa8.12□□□□□ -1.11
EPHA4-212ENST00000472696 PROSER2Q86WR7 435 aaPredicted RBP8.11□□□□□ -1.11
EPHA4-212ENST00000472696 ANKARQ7Z5J8 1434 aa8.11□□□□□ -1.11
EPHA4-212ENST00000472696 CCDC7Q96M83 1385 aa8.1□□□□□ -1.11
EPHA4-212ENST00000472696 CDC42BPGQ6DT37 1551 aa8.1□□□□□ -1.11
EPHA4-212ENST00000472696 WAPLQ7Z5K2 1190 aa8.1□□□□□ -1.11
EPHA4-212ENST00000472696 CADPS2Q86UW7 1296 aa8.1□□□□□ -1.11
EPHA4-212ENST00000472696 IQSEC2Q5JU85 1478 aa8.1□□□□□ -1.11
EPHA4-212ENST00000472696 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.09□□□□□ -1.11
EPHA4-212ENST00000472696 KIF7Q2M1P5 1343 aa8.09□□□□□ -1.11
EPHA4-212ENST00000472696 WASHC2AQ641Q2 1341 aa8.09□□□□□ -1.11
EPHA4-212ENST00000472696 ADRA2BP18089 450 aa8.09□□□□□ -1.11
EPHA4-212ENST00000472696 CDK19Q9BWU1 502 aa8.09□□□□□ -1.11
EPHA4-212ENST00000472696 CCDC61Q9Y6R9 512 aa8.09□□□□□ -1.11
EPHA4-212ENST00000472696 BRD4O60885 1362 aaPredicted RBP8.09□□□□□ -1.12
EPHA4-212ENST00000472696 MSH6P52701 1360 aa8.09□□□□□ -1.12
EPHA4-212ENST00000472696 PLEKHH1Q9ULM0 1364 aa8.09□□□□□ -1.12
EPHA4-212ENST00000472696 TULP4Q9NRJ4 1543 aa8.08□□□□□ -1.12
EPHA4-212ENST00000472696 STRCP1A6NGW2 1772 aa8.08□□□□□ -1.12
EPHA4-212ENST00000472696 HAP1P54257 671 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-212ENST00000472696 SRPK2P78362 688 aaKnown RBP8.08□□□□□ -1.12
EPHA4-212ENST00000472696 ZNF692Q9BU19 519 aaPredicted RBP8.08□□□□□ -1.12
EPHA4-212ENST00000472696 ITSN1Q15811 1721 aa8.08□□□□□ -1.12
EPHA4-212ENST00000472696 TMEM94Q12767 1356 aa8.08□□□□□ -1.12
EPHA4-212ENST00000472696 DISP3Q9P2K9 1392 aa8.08□□□□□ -1.12
EPHA4-212ENST00000472696 LRRC7Q96NW7 1537 aa8.08□□□□□ -1.12
EPHA4-212ENST00000472696 MINK1Q8N4C8 1332 aaPredicted RBP8.07□□□□□ -1.12
EPHA4-212ENST00000472696 ZNF335Q9H4Z2 1342 aaPredicted RBP8.07□□□□□ -1.12
EPHA4-212ENST00000472696 PLEKHG3A1L390 1219 aa8.07□□□□□ -1.12
EPHA4-212ENST00000472696 ATF3P18847 181 aa8.07□□□□□ -1.12
EPHA4-212ENST00000472696 C14orf37Q86TY3 774 aa8.07□□□□□ -1.12
EPHA4-212ENST00000472696 HIRIP3Q9BW71 556 aaPredicted RBP8.07□□□□□ -1.12
EPHA4-212ENST00000472696 TERF2IPQ9NYB0 399 aa8.07□□□□□ -1.12
EPHA4-212ENST00000472696 LTBP4Q8N2S1 1624 aa8.07□□□□□ -1.12
EPHA4-212ENST00000472696 ATP7BP35670 1465 aa8.06□□□□□ -1.12
EPHA4-212ENST00000472696 NALCNQ8IZF0 1738 aa8.06□□□□□ -1.12
EPHA4-212ENST00000472696 FMN2Q9NZ56 1722 aa8.06□□□□□ -1.12
EPHA4-212ENST00000472696 C11orf95C9JLR9 678 aaPredicted RBP8.06□□□□□ -1.12
EPHA4-212ENST00000472696 SAFB2Q14151 953 aaKnown RBP eCLIP8.06□□□□□ -1.12
EPHA4-212ENST00000472696 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
EPHA4-212ENST00000472696 ERICH6Q7L0X2 663 aa8.05□□□□□ -1.12
EPHA4-212ENST00000472696 HDGFL2Q7Z4V5 671 aaPredicted RBP8.05□□□□□ -1.12
EPHA4-212ENST00000472696 CABP2Q9NPB3 220 aa8.05□□□□□ -1.12
EPHA4-212ENST00000472696 KTN1Q86UP2 1357 aaKnown RBP8.05□□□□□ -1.12
EPHA4-212ENST00000472696 ANKRD36BQ8N2N9 1353 aa8.05□□□□□ -1.12
EPHA4-212ENST00000472696 XIRP1Q702N8 1843 aaKnown RBP8.04□□□□□ -1.12
EPHA4-212ENST00000472696 NPC1L1Q9UHC9 1359 aa8.04□□□□□ -1.12
EPHA4-212ENST00000472696 TOPAZ1Q8N9V7 1692 aa8.04□□□□□ -1.12
EPHA4-212ENST00000472696 PPIP5K1Q6PFW1 1433 aa8.03□□□□□ -1.12
EPHA4-212ENST00000472696 KIF1AQ12756 1690 aa8.03□□□□□ -1.12
EPHA4-212ENST00000472696 POLR3AO14802 1390 aaPredicted RBP8.03□□□□□ -1.12
EPHA4-212ENST00000472696 GTF3C3Q9Y5Q9 886 aa8.03□□□□□ -1.12
EPHA4-212ENST00000472696 CPSF1Q10570 1443 aaKnown RBP8.03□□□□□ -1.12
EPHA4-212ENST00000472696 MYOM1P52179 1685 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 C1orf167Q5SNV9 1468 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 NSD2O96028 1365 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 PER1O15534 1290 aaPredicted RBP8.02□□□□□ -1.13
EPHA4-212ENST00000472696 MSH5O43196 834 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 TOM1O60784 492 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 DDX10Q13206 875 aaKnown RBP8.02□□□□□ -1.13
EPHA4-212ENST00000472696 TMC1Q8TDI8 760 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 PANK3Q9H999 370 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 CABP1Q9NZU7 370 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 KNSTRNQ9Y448 316 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 USP32Q8NFA0 1604 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 MST1RQ04912 1400 aa8.02□□□□□ -1.13
EPHA4-212ENST00000472696 POLR3GLQ9BT43 218 aa8.01□□□□□ -1.13
EPHA4-212ENST00000472696 SLC12A5Q9H2X9 1139 aa8.01□□□□□ -1.13
EPHA4-212ENST00000472696 SLAIN2Q9P270 581 aa8.01□□□□□ -1.13
EPHA4-212ENST00000472696 PHF8Q9UPP1 1060 aa8.01□□□□□ -1.13
EPHA4-212ENST00000472696 AKAP12Q02952 1782 aa8.01□□□□□ -1.13
EPHA4-212ENST00000472696 EDC4Q6P2E9 1401 aaKnown RBP8.01□□□□□ -1.13
EPHA4-212ENST00000472696 CGNL1Q0VF96 1302 aa8.01□□□□□ -1.13
EPHA4-212ENST00000472696 TTC21AQ8NDW8 1320 aa8.01□□□□□ -1.13
EPHA4-212ENST00000472696 PRR36Q9H6K5 1346 aa8.01□□□□□ -1.13
EPHA4-212ENST00000472696 ZBTB22O15209 634 aa8□□□□□ -1.13
EPHA4-212ENST00000472696 PSME1Q06323 249 aa8□□□□□ -1.13
EPHA4-212ENST00000472696 ESCO1Q5FWF5 840 aa8□□□□□ -1.13
EPHA4-212ENST00000472696 DIEXFQ68CQ4 756 aaKnown RBP8□□□□□ -1.13
EPHA4-212ENST00000472696 ACEP12821 1306 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms