RNA–Protein interactions for RNA: ENST00000472677.1

TRABD-206, Transcript of TraB domain containing, humanhuman

TSL 1 (best)

Gene TRABD, Length 1,661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD-206ENST00000472677 ST20-MTHFSA0A0A6YYL1 179 aa30.1■■■□□ 2.41
TRABD-206ENST00000472677 EIF4G2P78344 907 aaKnown RBP eCLIP30.1■■■□□ 2.41
TRABD-206ENST00000472677 HIRIP3Q9BW71 556 aaPredicted RBP30.09■■■□□ 2.41
TRABD-206ENST00000472677 MSH6P52701 1360 aa30.09■■■□□ 2.41
TRABD-206ENST00000472677 ADGRL3Q9HAR2 1447 aa30.07■■■□□ 2.4
TRABD-206ENST00000472677 ATF3P18847 181 aa30.04■■■□□ 2.4
TRABD-206ENST00000472677 XIRP1Q702N8 1843 aaKnown RBP30.04■■■□□ 2.4
TRABD-206ENST00000472677 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.03■■■□□ 2.4
TRABD-206ENST00000472677 HSPA5P11021 654 aaKnown RBP30.03■■■□□ 2.4
TRABD-206ENST00000472677 NALCNQ8IZF0 1738 aa30■■■□□ 2.39
TRABD-206ENST00000472677 CADPS2Q86UW7 1296 aa30■■■□□ 2.39
TRABD-206ENST00000472677 QRICH2Q9H0J4 1663 aa30■■■□□ 2.39
TRABD-206ENST00000472677 IQSEC2Q5JU85 1478 aa29.98■■■□□ 2.39
TRABD-206ENST00000472677 WASLO00401 505 aaPredicted RBP29.97■■■□□ 2.39
TRABD-206ENST00000472677 TESK2Q96S53 571 aa29.96■■■□□ 2.39
TRABD-206ENST00000472677 DCCP43146 1447 aa29.96■■■□□ 2.39
TRABD-206ENST00000472677 SLC24A1O60721 1099 aa29.95■■■□□ 2.39
TRABD-206ENST00000472677 EVC2Q86UK5 1308 aa29.95■■■□□ 2.39
TRABD-206ENST00000472677 SBNO2Q9Y2G9 1366 aa29.95■■■□□ 2.38
TRABD-206ENST00000472677 NUTM2FA1L443 756 aa29.95■■■□□ 2.38
TRABD-206ENST00000472677 CDK19Q9BWU1 502 aa29.95■■■□□ 2.38
TRABD-206ENST00000472677 TOM1O60784 492 aa29.93■■■□□ 2.38
TRABD-206ENST00000472677 CDC42BPGQ6DT37 1551 aa29.92■■■□□ 2.38
TRABD-206ENST00000472677 UBAP1LF5GYI3 381 aa29.92■■■□□ 2.38
TRABD-206ENST00000472677 SRPK2P78362 688 aaKnown RBP29.92■■■□□ 2.38
TRABD-206ENST00000472677 ADGRB2O60241 1585 aa29.92■■■□□ 2.38
TRABD-206ENST00000472677 TMF1P82094 1093 aa29.91■■■□□ 2.38
TRABD-206ENST00000472677 SLAIN2Q9P270 581 aa29.91■■■□□ 2.38
TRABD-206ENST00000472677 CABP2Q9NPB3 220 aa29.88■■■□□ 2.37
TRABD-206ENST00000472677 TULP4Q9NRJ4 1543 aa29.86■■■□□ 2.37
TRABD-206ENST00000472677 MST1RQ04912 1400 aa29.84■■■□□ 2.37
TRABD-206ENST00000472677 PIP4K2BP78356 416 aa29.84■■■□□ 2.37
TRABD-206ENST00000472677 SCAF1Q9H7N4 1312 aaKnown RBP29.83■■■□□ 2.37
TRABD-206ENST00000472677 NUDT16Q96DE0 195 aaKnown RBP29.83■■■□□ 2.37
TRABD-206ENST00000472677 DISP3Q9P2K9 1392 aa29.83■■■□□ 2.37
TRABD-206ENST00000472677 ESCO1Q5FWF5 840 aa29.82■■■□□ 2.36
TRABD-206ENST00000472677 C1orf167Q5SNV9 1468 aa29.82■■■□□ 2.36
TRABD-206ENST00000472677 FMN2Q9NZ56 1722 aa29.82■■■□□ 2.36
TRABD-206ENST00000472677 CDCA8Q53HL2 280 aa29.82■■■□□ 2.36
TRABD-206ENST00000472677 PRR36Q9H6K5 1346 aa29.8■■■□□ 2.36
TRABD-206ENST00000472677 ANKARQ7Z5J8 1434 aa29.8■■■□□ 2.36
TRABD-206ENST00000472677 ORAI2Q96SN7 254 aa29.79■■■□□ 2.36
TRABD-206ENST00000472677 POLR3GLQ9BT43 218 aa29.78■■■□□ 2.36
TRABD-206ENST00000472677 CCDC61Q9Y6R9 512 aa29.78■■■□□ 2.36
TRABD-206ENST00000472677 PUS7Q96PZ0 661 aaKnown RBP29.76■■■□□ 2.35
TRABD-206ENST00000472677 ATP7BP35670 1465 aa29.75■■■□□ 2.35
TRABD-206ENST00000472677 ATAD2Q6PL18 1390 aa29.75■■■□□ 2.35
TRABD-206ENST00000472677 BRINP3Q76B58 766 aa29.75■■■□□ 2.35
TRABD-206ENST00000472677 C11orf95C9JLR9 678 aaPredicted RBP29.73■■■□□ 2.35
TRABD-206ENST00000472677 PMFBP1Q8TBY8 1022 aa29.73■■■□□ 2.35
TRABD-206ENST00000472677 USP32Q8NFA0 1604 aa29.72■■■□□ 2.35
TRABD-206ENST00000472677 TMC1Q8TDI8 760 aa29.72■■■□□ 2.35
TRABD-206ENST00000472677 PHF8Q9UPP1 1060 aa29.72■■■□□ 2.35
TRABD-206ENST00000472677 CABP1Q9NZU7 370 aa29.72■■■□□ 2.35
TRABD-206ENST00000472677 PPIP5K1Q6PFW1 1433 aa29.7■■■□□ 2.35
TRABD-206ENST00000472677 RGPD8O14715 1765 aaPredicted RBP29.7■■■□□ 2.34
TRABD-206ENST00000472677 NGDNQ8NEJ9 315 aaKnown RBP29.68■■■□□ 2.34
TRABD-206ENST00000472677 FOXO3O43524 673 aa29.67■■■□□ 2.34
TRABD-206ENST00000472677 ROBO1Q9Y6N7 1651 aa29.66■■■□□ 2.34
TRABD-206ENST00000472677 KIF7Q2M1P5 1343 aa29.66■■■□□ 2.34
TRABD-206ENST00000472677 PLEKHG3A1L390 1219 aa29.66■■■□□ 2.34
TRABD-206ENST00000472677 SLC12A5Q9H2X9 1139 aa29.66■■■□□ 2.34
TRABD-206ENST00000472677 DDX17Q92841 729 aaKnown RBP29.64■■■□□ 2.34
TRABD-206ENST00000472677 ITSN1Q15811 1721 aa29.64■■■□□ 2.34
TRABD-206ENST00000472677 FBXO41Q8TF61 875 aa29.63■■■□□ 2.33
TRABD-206ENST00000472677 ACEP12821 1306 aa29.63■■■□□ 2.33
TRABD-206ENST00000472677 PSME1Q06323 249 aa29.62■■■□□ 2.33
TRABD-206ENST00000472677 TOPAZ1Q8N9V7 1692 aa29.61■■■□□ 2.33
TRABD-206ENST00000472677 WASHC2AQ641Q2 1341 aa29.61■■■□□ 2.33
TRABD-206ENST00000472677 NPHP3Q7Z494 1330 aa29.61■■■□□ 2.33
TRABD-206ENST00000472677 NINLQ9Y2I6 1382 aa29.61■■■□□ 2.33
TRABD-206ENST00000472677 CCDC7Q96M83 1385 aa29.6■■■□□ 2.33
TRABD-206ENST00000472677 KIF1AQ12756 1690 aa29.6■■■□□ 2.33
TRABD-206ENST00000472677 XPCQ01831 940 aaPredicted RBP29.6■■■□□ 2.33
TRABD-206ENST00000472677 ZNF316A6NFI3 1004 aaPredicted RBP29.58■■■□□ 2.33
TRABD-206ENST00000472677 TERF2IPQ9NYB0 399 aa29.58■■■□□ 2.33
TRABD-206ENST00000472677 POLR3AO14802 1390 aaPredicted RBP29.57■■■□□ 2.32
TRABD-206ENST00000472677 HDGFL2Q7Z4V5 671 aaPredicted RBP29.57■■■□□ 2.32
TRABD-206ENST00000472677 KRT28Q7Z3Y7 464 aa29.56■■■□□ 2.32
TRABD-206ENST00000472677 ZNF692Q9BU19 519 aaPredicted RBP29.56■■■□□ 2.32
TRABD-206ENST00000472677 KTN1Q86UP2 1357 aaKnown RBP29.52■■■□□ 2.32
TRABD-206ENST00000472677 A0A1W2PP64 1363 aa29.5■■■□□ 2.31
TRABD-206ENST00000472677 PAK3O75914 559 aaPredicted RBP29.5■■■□□ 2.31
TRABD-206ENST00000472677 SOS2Q07890 1332 aaPredicted RBP29.5■■■□□ 2.31
TRABD-206ENST00000472677 CPSF1Q10570 1443 aaKnown RBP29.5■■■□□ 2.31
TRABD-206ENST00000472677 ANKRD36BQ8N2N9 1353 aa29.5■■■□□ 2.31
TRABD-206ENST00000472677 HSPA1LP34931 641 aa29.5■■■□□ 2.31
TRABD-206ENST00000472677 NHSL1Q5SYE7 1610 aa29.49■■■□□ 2.31
TRABD-206ENST00000472677 AHDC1Q5TGY3 1603 aaPredicted RBP29.49■■■□□ 2.31
TRABD-206ENST00000472677 CD163L1Q9NR16 1453 aa29.49■■■□□ 2.31
TRABD-206ENST00000472677 MYOM1P52179 1685 aa29.47■■■□□ 2.31
TRABD-206ENST00000472677 PANK3Q9H999 370 aa29.47■■■□□ 2.31
TRABD-206ENST00000472677 PXDNQ92626 1479 aa29.47■■■□□ 2.31
TRABD-206ENST00000472677 USP6P35125 1406 aa29.47■■■□□ 2.31
TRABD-206ENST00000472677 PHLPP1O60346 1717 aa29.46■■■□□ 2.31
TRABD-206ENST00000472677 LRRC59Q96AG4 307 aaKnown RBP29.46■■■□□ 2.31
TRABD-206ENST00000472677 LMOD2Q6P5Q4 547 aa29.45■■■□□ 2.31
TRABD-206ENST00000472677 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.42■■■□□ 2.3
TRABD-206ENST00000472677 SBNO1A3KN83 1393 aa29.42■■■□□ 2.3
TRABD-206ENST00000472677 CARD14Q9BXL6 1004 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms