RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 UPF1Q92900 1129 aaKnown RBP eCLIP24.91■■□□□ 1.58
PKD1-208ENST00000472577 PTCH1Q13635 1447 aa24.91■■□□□ 1.58
PKD1-208ENST00000472577 AFF2P51816 1311 aa24.9■■□□□ 1.58
PKD1-208ENST00000472577 C1orf167Q5SNV9 1468 aa24.89■■□□□ 1.58
PKD1-208ENST00000472577 LAMC1P11047 1609 aa24.89■■□□□ 1.57
PKD1-208ENST00000472577 ROBO2Q9HCK4 1378 aa24.89■■□□□ 1.57
PKD1-208ENST00000472577 CDK12Q9NYV4 1490 aaPredicted RBP24.89■■□□□ 1.57
PKD1-208ENST00000472577 L3MBTL2Q969R5 705 aa24.88■■□□□ 1.57
PKD1-208ENST00000472577 RXRBP28702 533 aa24.87■■□□□ 1.57
PKD1-208ENST00000472577 STAC3Q96MF2 364 aa24.87■■□□□ 1.57
PKD1-208ENST00000472577 LRRC59Q96AG4 307 aaKnown RBP24.86■■□□□ 1.57
PKD1-208ENST00000472577 PRAG1Q86YV5 1406 aa24.86■■□□□ 1.57
PKD1-208ENST00000472577 RGS12O14924 1447 aa24.85■■□□□ 1.57
PKD1-208ENST00000472577 CFAP70Q5T0N1 1121 aa24.84■■□□□ 1.57
PKD1-208ENST00000472577 C14orf93Q9H972 538 aaKnown RBP24.84■■□□□ 1.57
PKD1-208ENST00000472577 CCER1Q8TC90 406 aaPredicted RBP24.83■■□□□ 1.57
PKD1-208ENST00000472577 C8orf37Q96NL8 207 aa24.83■■□□□ 1.57
PKD1-208ENST00000472577 CLSPNQ9HAW4 1339 aa24.83■■□□□ 1.56
PKD1-208ENST00000472577 TMEM132EQ6IEE7 984 aa24.8■■□□□ 1.56
PKD1-208ENST00000472577 ORAI2Q96SN7 254 aa24.8■■□□□ 1.56
PKD1-208ENST00000472577 TONSLQ96HA7 1378 aa24.8■■□□□ 1.56
PKD1-208ENST00000472577 SOS2Q07890 1332 aaPredicted RBP24.77■■□□□ 1.56
PKD1-208ENST00000472577 ADAMTS2O95450 1211 aa24.76■■□□□ 1.55
PKD1-208ENST00000472577 ADGRB1O14514 1584 aa24.76■■□□□ 1.55
PKD1-208ENST00000472577 CDC42BPGQ6DT37 1551 aa24.76■■□□□ 1.55
PKD1-208ENST00000472577 LRPPRCP42704 1394 aaKnown RBP24.75■■□□□ 1.55
PKD1-208ENST00000472577 COL22A1Q8NFW1 1626 aaPredicted RBP24.75■■□□□ 1.55
PKD1-208ENST00000472577 QTRT2Q9H974 415 aaKnown RBP24.74■■□□□ 1.55
PKD1-208ENST00000472577 YTHDC2Q9H6S0 1430 aaKnown RBP24.74■■□□□ 1.55
PKD1-208ENST00000472577 KIAA1210Q9ULL0 1709 aa24.73■■□□□ 1.55
PKD1-208ENST00000472577 RBM6P78332 1123 aaKnown RBP24.72■■□□□ 1.55
PKD1-208ENST00000472577 STK26Q9P289 416 aa24.72■■□□□ 1.55
PKD1-208ENST00000472577 KNDC1Q76NI1 1749 aa24.72■■□□□ 1.55
PKD1-208ENST00000472577 TECPR2O15040 1411 aa24.71■■□□□ 1.55
PKD1-208ENST00000472577 ABCC11Q96J66 1382 aa24.7■■□□□ 1.55
PKD1-208ENST00000472577 NGLY1Q96IV0 654 aa24.7■■□□□ 1.54
PKD1-208ENST00000472577 PXDNQ92626 1479 aa24.7■■□□□ 1.54
PKD1-208ENST00000472577 NBPF8Q3BBV2 869 aa24.69■■□□□ 1.54
PKD1-208ENST00000472577 TRPM1Q7Z4N2 1603 aa24.68■■□□□ 1.54
PKD1-208ENST00000472577 NBPF1Q3BBV0 1214 aa24.67■■□□□ 1.54
PKD1-208ENST00000472577 DLC1Q96QB1 1528 aa24.63■■□□□ 1.53
PKD1-208ENST00000472577 USP21Q9UK80 565 aa24.63■■□□□ 1.53
PKD1-208ENST00000472577 PLEKHH1Q9ULM0 1364 aa24.63■■□□□ 1.53
PKD1-208ENST00000472577 MARF1Q9Y4F3 1742 aaKnown RBP24.63■■□□□ 1.53
PKD1-208ENST00000472577 ATRNO75882 1429 aa24.62■■□□□ 1.53
PKD1-208ENST00000472577 XPCQ01831 940 aaPredicted RBP24.62■■□□□ 1.53
PKD1-208ENST00000472577 ESCO1Q5FWF5 840 aa24.62■■□□□ 1.53
PKD1-208ENST00000472577 WAPLQ7Z5K2 1190 aa24.62■■□□□ 1.53
PKD1-208ENST00000472577 TIMELESSQ9UNS1 1208 aa24.62■■□□□ 1.53
PKD1-208ENST00000472577 TRAK1Q9UPV9 953 aa24.62■■□□□ 1.53
PKD1-208ENST00000472577 NPHP3Q7Z494 1330 aa24.61■■□□□ 1.53
PKD1-208ENST00000472577 FNBP4Q8N3X1 1017 aaPredicted RBP24.61■■□□□ 1.53
PKD1-208ENST00000472577 SIRT1Q96EB6 747 aa24.61■■□□□ 1.53
PKD1-208ENST00000472577 FMN2Q9NZ56 1722 aa24.6■■□□□ 1.53
PKD1-208ENST00000472577 NUTM2FA1L443 756 aa24.59■■□□□ 1.53
PKD1-208ENST00000472577 ARHGEF28Q8N1W1 1705 aaKnown RBP24.58■■□□□ 1.53
PKD1-208ENST00000472577 FOXO3O43524 673 aa24.58■■□□□ 1.53
PKD1-208ENST00000472577 TRPC5Q9UL62 973 aaPredicted RBP24.58■■□□□ 1.53
PKD1-208ENST00000472577 BCL9LQ86UU0 1499 aa24.58■■□□□ 1.52
PKD1-208ENST00000472577 ROCK2O75116 1388 aaKnown RBP24.57■■□□□ 1.52
PKD1-208ENST00000472577 ATAD2Q6PL18 1390 aa24.57■■□□□ 1.52
PKD1-208ENST00000472577 PRAM1Q96QH2 718 aa24.57■■□□□ 1.52
PKD1-208ENST00000472577 RALGAPBQ86X10 1494 aa24.57■■□□□ 1.52
PKD1-208ENST00000472577 GPRASP1Q5JY77 1395 aa24.54■■□□□ 1.52
PKD1-208ENST00000472577 KIF1AQ12756 1690 aa24.53■■□□□ 1.52
PKD1-208ENST00000472577 EP400Q96L91 3159 aa24.53■■□□□ 1.52
PKD1-208ENST00000472577 SAFB2Q14151 953 aaKnown RBP eCLIP24.53■■□□□ 1.52
PKD1-208ENST00000472577 POGKQ9P215 609 aa24.53■■□□□ 1.52
PKD1-208ENST00000472577 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.52■■□□□ 1.52
PKD1-208ENST00000472577 RGPD8O14715 1765 aaPredicted RBP24.49■■□□□ 1.51
PKD1-208ENST00000472577 GLI3P10071 1580 aa24.49■■□□□ 1.51
PKD1-208ENST00000472577 USP32Q8NFA0 1604 aa24.49■■□□□ 1.51
PKD1-208ENST00000472577 CARD11Q9BXL7 1154 aa24.47■■□□□ 1.51
PKD1-208ENST00000472577 SLIT2O94813 1529 aa24.46■■□□□ 1.51
PKD1-208ENST00000472577 SPATA31A3Q5VYP0 1347 aa24.46■■□□□ 1.51
PKD1-208ENST00000472577 SRCAPQ6ZRS2 3230 aa24.46■■□□□ 1.51
PKD1-208ENST00000472577 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
PKD1-208ENST00000472577 MINK1Q8N4C8 1332 aaPredicted RBP24.45■■□□□ 1.5
PKD1-208ENST00000472577 ABCA3Q99758 1704 aa24.44■■□□□ 1.5
PKD1-208ENST00000472577 GJD4Q96KN9 370 aaPredicted RBP24.44■■□□□ 1.5
PKD1-208ENST00000472577 HIRIP3Q9BW71 556 aaPredicted RBP24.43■■□□□ 1.5
PKD1-208ENST00000472577 CENPJQ9HC77 1338 aaPredicted RBP24.42■■□□□ 1.5
PKD1-208ENST00000472577 QRICH2Q9H0J4 1663 aa24.42■■□□□ 1.5
PKD1-208ENST00000472577 TNS3Q68CZ2 1445 aa24.42■■□□□ 1.5
PKD1-208ENST00000472577 PLCH1Q4KWH8 1693 aa24.41■■□□□ 1.5
PKD1-208ENST00000472577 KRT28Q7Z3Y7 464 aa24.4■■□□□ 1.5
PKD1-208ENST00000472577 BRWD3Q6RI45 1802 aa24.39■■□□□ 1.49
PKD1-208ENST00000472577 EIF3AQ14152 1382 aaKnown RBP24.39■■□□□ 1.49
PKD1-208ENST00000472577 UNC5CLQ8IV45 518 aa24.38■■□□□ 1.49
PKD1-208ENST00000472577 CABLES1Q8TDN4 633 aa24.36■■□□□ 1.49
PKD1-208ENST00000472577 PHF8Q9UPP1 1060 aa24.36■■□□□ 1.49
PKD1-208ENST00000472577 WASLO00401 505 aaPredicted RBP24.35■■□□□ 1.49
PKD1-208ENST00000472577 PLEKHG5O94827 1062 aa24.35■■□□□ 1.49
PKD1-208ENST00000472577 NWD2Q9ULI1 1742 aa24.34■■□□□ 1.49
PKD1-208ENST00000472577 TULP4Q9NRJ4 1543 aa24.32■■□□□ 1.48
PKD1-208ENST00000472577 TRPM3Q9HCF6 1732 aaPredicted RBP24.32■■□□□ 1.48
PKD1-208ENST00000472577 SBNO1A3KN83 1393 aa24.31■■□□□ 1.48
PKD1-208ENST00000472577 USP47Q96K76 1375 aa24.31■■□□□ 1.48
PKD1-208ENST00000472577 PRR36Q9H6K5 1346 aa24.31■■□□□ 1.48
PKD1-208ENST00000472577 ANKARQ7Z5J8 1434 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms