RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 ZNF316A6NFI3 1004 aaPredicted RBP14.65□□□□□ -0.06
UBE2F-220ENST00000472479 CDCA8Q53HL2 280 aa14.65□□□□□ -0.06
UBE2F-220ENST00000472479 SETD1AO15047 1707 aaKnown RBP14.65□□□□□ -0.06
UBE2F-220ENST00000472479 ATF3P18847 181 aa14.64□□□□□ -0.07
UBE2F-220ENST00000472479 HOXD11P31277 338 aaPredicted RBP14.64□□□□□ -0.07
UBE2F-220ENST00000472479 TMEM94Q12767 1356 aa14.64□□□□□ -0.07
UBE2F-220ENST00000472479 DLC1Q96QB1 1528 aa14.63□□□□□ -0.07
UBE2F-220ENST00000472479 NUTM2FA1L443 756 aa14.63□□□□□ -0.07
UBE2F-220ENST00000472479 TECPR2O15040 1411 aa14.63□□□□□ -0.07
UBE2F-220ENST00000472479 PTCH1Q13635 1447 aa14.63□□□□□ -0.07
UBE2F-220ENST00000472479 CHD2O14647 1828 aaKnown RBP14.63□□□□□ -0.07
UBE2F-220ENST00000472479 CDK19Q9BWU1 502 aa14.63□□□□□ -0.07
UBE2F-220ENST00000472479 WASLO00401 505 aaPredicted RBP14.62□□□□□ -0.07
UBE2F-220ENST00000472479 C19orf44Q9H6X5 657 aa14.62□□□□□ -0.07
UBE2F-220ENST00000472479 NKTRP30414 1462 aaKnown RBP14.62□□□□□ -0.07
UBE2F-220ENST00000472479 TMC1Q8TDI8 760 aa14.61□□□□□ -0.07
UBE2F-220ENST00000472479 TESK2Q96S53 571 aa14.61□□□□□ -0.07
UBE2F-220ENST00000472479 CABP2Q9NPB3 220 aa14.61□□□□□ -0.07
UBE2F-220ENST00000472479 CPS1P31327 1500 aa14.61□□□□□ -0.07
UBE2F-220ENST00000472479 MSH6P52701 1360 aa14.6□□□□□ -0.07
UBE2F-220ENST00000472479 KNDC1Q76NI1 1749 aa14.59□□□□□ -0.07
UBE2F-220ENST00000472479 XRN1Q8IZH2 1706 aaKnown RBP14.59□□□□□ -0.07
UBE2F-220ENST00000472479 ARHGEF28Q8N1W1 1705 aaKnown RBP14.59□□□□□ -0.07
UBE2F-220ENST00000472479 NWD1Q149M9 1564 aa14.58□□□□□ -0.07
UBE2F-220ENST00000472479 CADPS2Q86UW7 1296 aa14.58□□□□□ -0.08
UBE2F-220ENST00000472479 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
UBE2F-220ENST00000472479 QRICH2Q9H0J4 1663 aa14.57□□□□□ -0.08
UBE2F-220ENST00000472479 LRRC7Q96NW7 1537 aa14.56□□□□□ -0.08
UBE2F-220ENST00000472479 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
UBE2F-220ENST00000472479 NUDT16Q96DE0 195 aaKnown RBP14.56□□□□□ -0.08
UBE2F-220ENST00000472479 SBNO2Q9Y2G9 1366 aa14.56□□□□□ -0.08
UBE2F-220ENST00000472479 ADGRL3Q9HAR2 1447 aa14.56□□□□□ -0.08
UBE2F-220ENST00000472479 NCOA3Q9Y6Q9 1424 aa14.56□□□□□ -0.08
UBE2F-220ENST00000472479 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
UBE2F-220ENST00000472479 ESCO1Q5FWF5 840 aa14.55□□□□□ -0.08
UBE2F-220ENST00000472479 DISP3Q9P2K9 1392 aa14.55□□□□□ -0.08
UBE2F-220ENST00000472479 KIF7Q2M1P5 1343 aa14.54□□□□□ -0.08
UBE2F-220ENST00000472479 STRCP1A6NGW2 1772 aa14.54□□□□□ -0.08
UBE2F-220ENST00000472479 CERKQ8TCT0 537 aa14.53□□□□□ -0.08
UBE2F-220ENST00000472479 CCDC61Q9Y6R9 512 aa14.53□□□□□ -0.08
UBE2F-220ENST00000472479 ATAD2Q6PL18 1390 aa14.52□□□□□ -0.08
UBE2F-220ENST00000472479 CCDC7Q96M83 1385 aa14.52□□□□□ -0.08
UBE2F-220ENST00000472479 TOM1O60784 492 aa14.52□□□□□ -0.08
UBE2F-220ENST00000472479 DDX10Q13206 875 aaKnown RBP14.52□□□□□ -0.08
UBE2F-220ENST00000472479 NGDNQ8NEJ9 315 aaKnown RBP14.52□□□□□ -0.08
UBE2F-220ENST00000472479 PUS7Q96PZ0 661 aaKnown RBP14.52□□□□□ -0.08
UBE2F-220ENST00000472479 CABP1Q9NZU7 370 aa14.52□□□□□ -0.08
UBE2F-220ENST00000472479 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.52□□□□□ -0.09
UBE2F-220ENST00000472479 WASHC2AQ641Q2 1341 aa14.51□□□□□ -0.09
UBE2F-220ENST00000472479 UBAP1LF5GYI3 381 aa14.51□□□□□ -0.09
UBE2F-220ENST00000472479 PMFBP1Q8TBY8 1022 aa14.51□□□□□ -0.09
UBE2F-220ENST00000472479 HDGFL2Q7Z4V5 671 aaPredicted RBP14.5□□□□□ -0.09
UBE2F-220ENST00000472479 SLC12A5Q9H2X9 1139 aa14.5□□□□□ -0.09
UBE2F-220ENST00000472479 SLAIN2Q9P270 581 aa14.5□□□□□ -0.09
UBE2F-220ENST00000472479 LTBP4Q8N2S1 1624 aa14.5□□□□□ -0.09
UBE2F-220ENST00000472479 PIP4K2BP78356 416 aa14.5□□□□□ -0.09
UBE2F-220ENST00000472479 TERF2IPQ9NYB0 399 aa14.5□□□□□ -0.09
UBE2F-220ENST00000472479 PHF8Q9UPP1 1060 aa14.49□□□□□ -0.09
UBE2F-220ENST00000472479 TULP4Q9NRJ4 1543 aa14.48□□□□□ -0.09
UBE2F-220ENST00000472479 PSME1Q06323 249 aa14.48□□□□□ -0.09
UBE2F-220ENST00000472479 ORAI2Q96SN7 254 aa14.48□□□□□ -0.09
UBE2F-220ENST00000472479 PRR36Q9H6K5 1346 aa14.47□□□□□ -0.09
UBE2F-220ENST00000472479 NALCNQ8IZF0 1738 aa14.47□□□□□ -0.09
UBE2F-220ENST00000472479 DCCP43146 1447 aa14.47□□□□□ -0.09
UBE2F-220ENST00000472479 PPIP5K1Q6PFW1 1433 aa14.47□□□□□ -0.09
UBE2F-220ENST00000472479 CNGB1Q14028 1251 aaPredicted RBP14.47□□□□□ -0.09
UBE2F-220ENST00000472479 PANK3Q9H999 370 aa14.47□□□□□ -0.09
UBE2F-220ENST00000472479 ANKARQ7Z5J8 1434 aa14.46□□□□□ -0.09
UBE2F-220ENST00000472479 ADGRB2O60241 1585 aa14.46□□□□□ -0.1
UBE2F-220ENST00000472479 CDC42BPGQ6DT37 1551 aa14.46□□□□□ -0.1
UBE2F-220ENST00000472479 ZNF692Q9BU19 519 aaPredicted RBP14.45□□□□□ -0.1
UBE2F-220ENST00000472479 ACEP12821 1306 aa14.45□□□□□ -0.1
UBE2F-220ENST00000472479 FOXO3O43524 673 aa14.44□□□□□ -0.1
UBE2F-220ENST00000472479 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
UBE2F-220ENST00000472479 KNSTRNQ9Y448 316 aa14.44□□□□□ -0.1
UBE2F-220ENST00000472479 C1orf167Q5SNV9 1468 aa14.44□□□□□ -0.1
UBE2F-220ENST00000472479 NINLQ9Y2I6 1382 aa14.44□□□□□ -0.1
UBE2F-220ENST00000472479 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
UBE2F-220ENST00000472479 LMOD2Q6P5Q4 547 aa14.43□□□□□ -0.1
UBE2F-220ENST00000472479 MST1RQ04912 1400 aa14.42□□□□□ -0.1
UBE2F-220ENST00000472479 KTN1Q86UP2 1357 aaKnown RBP14.42□□□□□ -0.1
UBE2F-220ENST00000472479 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.42□□□□□ -0.1
UBE2F-220ENST00000472479 FMN2Q9NZ56 1722 aa14.41□□□□□ -0.1
UBE2F-220ENST00000472479 ATP7BP35670 1465 aa14.41□□□□□ -0.1
UBE2F-220ENST00000472479 XPCQ01831 940 aaPredicted RBP14.41□□□□□ -0.1
UBE2F-220ENST00000472479 BRINP3Q76B58 766 aa14.41□□□□□ -0.1
UBE2F-220ENST00000472479 KRT28Q7Z3Y7 464 aa14.41□□□□□ -0.1
UBE2F-220ENST00000472479 XIRP1Q702N8 1843 aaKnown RBP14.4□□□□□ -0.1
UBE2F-220ENST00000472479 NPHP3Q7Z494 1330 aa14.4□□□□□ -0.1
UBE2F-220ENST00000472479 ANKRD36BQ8N2N9 1353 aa14.4□□□□□ -0.1
UBE2F-220ENST00000472479 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
UBE2F-220ENST00000472479 DDX17Q92841 729 aaKnown RBP14.39□□□□□ -0.11
UBE2F-220ENST00000472479 IQSEC2Q5JU85 1478 aa14.38□□□□□ -0.11
UBE2F-220ENST00000472479 A0A1W2PP64 1363 aa14.37□□□□□ -0.11
UBE2F-220ENST00000472479 DIEXFQ68CQ4 756 aaKnown RBP14.37□□□□□ -0.11
UBE2F-220ENST00000472479 ABTB2Q8N961 1025 aa14.36□□□□□ -0.11
UBE2F-220ENST00000472479 CARD14Q9BXL6 1004 aa14.36□□□□□ -0.11
UBE2F-220ENST00000472479 CGNL1Q0VF96 1302 aa14.36□□□□□ -0.11
UBE2F-220ENST00000472479 USP32Q8NFA0 1604 aa14.35□□□□□ -0.11
UBE2F-220ENST00000472479 ITSN1Q15811 1721 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms