RNA–Protein interactions for RNA: ENST00000472381.5

RPUSD3-213, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 5

Gene RPUSD3, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-213ENST00000472381 LRPPRCP42704 1394 aaKnown RBP29.79■■■□□ 2.36
RPUSD3-213ENST00000472381 SOS2Q07890 1332 aaPredicted RBP29.79■■■□□ 2.36
RPUSD3-213ENST00000472381 KNDC1Q76NI1 1749 aa29.79■■■□□ 2.36
RPUSD3-213ENST00000472381 RXRBP28702 533 aa29.78■■■□□ 2.36
RPUSD3-213ENST00000472381 C8orf37Q96NL8 207 aa29.76■■■□□ 2.35
RPUSD3-213ENST00000472381 ABCC11Q96J66 1382 aa29.76■■■□□ 2.35
RPUSD3-213ENST00000472381 TMEM132EQ6IEE7 984 aa29.75■■■□□ 2.35
RPUSD3-213ENST00000472381 ESCO1Q5FWF5 840 aa29.74■■■□□ 2.35
RPUSD3-213ENST00000472381 WAPLQ7Z5K2 1190 aa29.74■■■□□ 2.35
RPUSD3-213ENST00000472381 RAB3GAP2Q9H2M9 1393 aa29.74■■■□□ 2.35
RPUSD3-213ENST00000472381 NPHP3Q7Z494 1330 aa29.71■■■□□ 2.35
RPUSD3-213ENST00000472381 YTHDC2Q9H6S0 1430 aaKnown RBP29.71■■■□□ 2.35
RPUSD3-213ENST00000472381 ADAMTS2O95450 1211 aa29.71■■■□□ 2.35
RPUSD3-213ENST00000472381 CDK12Q9NYV4 1490 aaPredicted RBP29.7■■■□□ 2.35
RPUSD3-213ENST00000472381 MYOM2P54296 1465 aa29.69■■■□□ 2.34
RPUSD3-213ENST00000472381 PLEKHH1Q9ULM0 1364 aa29.69■■■□□ 2.34
RPUSD3-213ENST00000472381 COL22A1Q8NFW1 1626 aaPredicted RBP29.68■■■□□ 2.34
RPUSD3-213ENST00000472381 NGLY1Q96IV0 654 aa29.68■■■□□ 2.34
RPUSD3-213ENST00000472381 NRXN1Q9ULB1 1477 aa29.68■■■□□ 2.34
RPUSD3-213ENST00000472381 C14orf93Q9H972 538 aaKnown RBP29.67■■■□□ 2.34
RPUSD3-213ENST00000472381 NUTM2FA1L443 756 aa29.66■■■□□ 2.34
RPUSD3-213ENST00000472381 FMN2Q9NZ56 1722 aa29.65■■■□□ 2.34
RPUSD3-213ENST00000472381 QTRT2Q9H974 415 aaKnown RBP29.65■■■□□ 2.34
RPUSD3-213ENST00000472381 PXDNQ92626 1479 aa29.65■■■□□ 2.34
RPUSD3-213ENST00000472381 FOXO3O43524 673 aa29.64■■■□□ 2.34
RPUSD3-213ENST00000472381 DHX57Q6P158 1386 aaKnown RBP29.64■■■□□ 2.33
RPUSD3-213ENST00000472381 SIRT1Q96EB6 747 aa29.63■■■□□ 2.33
RPUSD3-213ENST00000472381 RBM6P78332 1123 aaKnown RBP29.62■■■□□ 2.33
RPUSD3-213ENST00000472381 CFAP70Q5T0N1 1121 aa29.62■■■□□ 2.33
RPUSD3-213ENST00000472381 KIF1AQ12756 1690 aa29.6■■■□□ 2.33
RPUSD3-213ENST00000472381 XPCQ01831 940 aaPredicted RBP29.6■■■□□ 2.33
RPUSD3-213ENST00000472381 UPF1Q92900 1129 aaKnown RBP eCLIP29.6■■■□□ 2.33
RPUSD3-213ENST00000472381 USP21Q9UK80 565 aa29.57■■■□□ 2.32
RPUSD3-213ENST00000472381 RGS12O14924 1447 aa29.56■■■□□ 2.32
RPUSD3-213ENST00000472381 MARF1Q9Y4F3 1742 aaKnown RBP29.54■■■□□ 2.32
RPUSD3-213ENST00000472381 FNBP4Q8N3X1 1017 aaPredicted RBP29.53■■■□□ 2.32
RPUSD3-213ENST00000472381 PRAM1Q96QH2 718 aa29.53■■■□□ 2.32
RPUSD3-213ENST00000472381 TRPC5Q9UL62 973 aaPredicted RBP29.53■■■□□ 2.32
RPUSD3-213ENST00000472381 RGPD8O14715 1765 aaPredicted RBP29.53■■■□□ 2.32
RPUSD3-213ENST00000472381 DLC1Q96QB1 1528 aa29.52■■■□□ 2.32
RPUSD3-213ENST00000472381 SAFB2Q14151 953 aaKnown RBP eCLIP29.5■■■□□ 2.31
RPUSD3-213ENST00000472381 POGKQ9P215 609 aa29.5■■■□□ 2.31
RPUSD3-213ENST00000472381 HRCP23327 699 aa29.49■■■□□ 2.31
RPUSD3-213ENST00000472381 SPATA31A3Q5VYP0 1347 aa29.48■■■□□ 2.31
RPUSD3-213ENST00000472381 PHF8Q9UPP1 1060 aa29.48■■■□□ 2.31
RPUSD3-213ENST00000472381 ADGRB1O14514 1584 aa29.47■■■□□ 2.31
RPUSD3-213ENST00000472381 KRT28Q7Z3Y7 464 aa29.47■■■□□ 2.31
RPUSD3-213ENST00000472381 DCAF11Q8TEB1 546 aa29.46■■■□□ 2.31
RPUSD3-213ENST00000472381 KDM2AQ9Y2K7 1162 aa29.46■■■□□ 2.31
RPUSD3-213ENST00000472381 ATRNO75882 1429 aa29.45■■■□□ 2.31
RPUSD3-213ENST00000472381 PSME1Q06323 249 aa29.44■■■□□ 2.3
RPUSD3-213ENST00000472381 STAC3Q96MF2 364 aa29.44■■■□□ 2.3
RPUSD3-213ENST00000472381 ADGRB2O60241 1585 aa29.43■■■□□ 2.3
RPUSD3-213ENST00000472381 TRAK1Q9UPV9 953 aa29.42■■■□□ 2.3
RPUSD3-213ENST00000472381 BCL9LQ86UU0 1499 aa29.42■■■□□ 2.3
RPUSD3-213ENST00000472381 TNS3Q68CZ2 1445 aa29.41■■■□□ 2.3
RPUSD3-213ENST00000472381 ANKARQ7Z5J8 1434 aa29.41■■■□□ 2.3
RPUSD3-213ENST00000472381 USP32Q8NFA0 1604 aa29.39■■■□□ 2.3
RPUSD3-213ENST00000472381 ATAD2Q6PL18 1390 aa29.39■■■□□ 2.29
RPUSD3-213ENST00000472381 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.38■■■□□ 2.29
RPUSD3-213ENST00000472381 HAP1P54257 671 aaPredicted RBP29.37■■■□□ 2.29
RPUSD3-213ENST00000472381 SBNO1A3KN83 1393 aa29.37■■■□□ 2.29
RPUSD3-213ENST00000472381 EIF3AQ14152 1382 aaKnown RBP29.36■■■□□ 2.29
RPUSD3-213ENST00000472381 HIRIP3Q9BW71 556 aaPredicted RBP29.35■■■□□ 2.29
RPUSD3-213ENST00000472381 MINK1Q8N4C8 1332 aaPredicted RBP29.35■■■□□ 2.29
RPUSD3-213ENST00000472381 LMOD2Q6P5Q4 547 aa29.34■■■□□ 2.29
RPUSD3-213ENST00000472381 PMFBP1Q8TBY8 1022 aa29.34■■■□□ 2.29
RPUSD3-213ENST00000472381 ARHGEF10O15013 1369 aa29.34■■■□□ 2.29
RPUSD3-213ENST00000472381 GJD4Q96KN9 370 aaPredicted RBP29.33■■■□□ 2.29
RPUSD3-213ENST00000472381 SLIT2O94813 1529 aa29.33■■■□□ 2.29
RPUSD3-213ENST00000472381 UNC5CLQ8IV45 518 aa29.32■■■□□ 2.28
RPUSD3-213ENST00000472381 ABCA3Q99758 1704 aa29.31■■■□□ 2.28
RPUSD3-213ENST00000472381 TULP4Q9NRJ4 1543 aa29.3■■■□□ 2.28
RPUSD3-213ENST00000472381 PLEKHG5O94827 1062 aa29.3■■■□□ 2.28
RPUSD3-213ENST00000472381 CABLES1Q8TDN4 633 aa29.3■■■□□ 2.28
RPUSD3-213ENST00000472381 ARHGEF28Q8N1W1 1705 aaKnown RBP29.29■■■□□ 2.28
RPUSD3-213ENST00000472381 WASLO00401 505 aaPredicted RBP29.28■■■□□ 2.28
RPUSD3-213ENST00000472381 GPRASP1Q5JY77 1395 aa29.27■■■□□ 2.28
RPUSD3-213ENST00000472381 TRPM3Q9HCF6 1732 aaPredicted RBP29.26■■■□□ 2.27
RPUSD3-213ENST00000472381 RALGAPBQ86X10 1494 aa29.26■■■□□ 2.27
RPUSD3-213ENST00000472381 PRR36Q9H6K5 1346 aa29.25■■■□□ 2.27
RPUSD3-213ENST00000472381 PLCH1Q4KWH8 1693 aa29.25■■■□□ 2.27
RPUSD3-213ENST00000472381 GLI3P10071 1580 aa29.25■■■□□ 2.27
RPUSD3-213ENST00000472381 NWD2Q9ULI1 1742 aa29.25■■■□□ 2.27
RPUSD3-213ENST00000472381 ITSN1Q15811 1721 aa29.23■■■□□ 2.27
RPUSD3-213ENST00000472381 KIAA1210Q9ULL0 1709 aa29.22■■■□□ 2.27
RPUSD3-213ENST00000472381 ALS2Q96Q42 1657 aa29.21■■■□□ 2.27
RPUSD3-213ENST00000472381 NGDNQ8NEJ9 315 aaKnown RBP29.2■■■□□ 2.26
RPUSD3-213ENST00000472381 EP400Q96L91 3159 aa29.19■■■□□ 2.26
RPUSD3-213ENST00000472381 VPS72Q15906 364 aa29.18■■■□□ 2.26
RPUSD3-213ENST00000472381 CCDC125Q86Z20 511 aa29.16■■■□□ 2.26
RPUSD3-213ENST00000472381 CCDC9Q9Y3X0 531 aaKnown RBP29.16■■■□□ 2.26
RPUSD3-213ENST00000472381 ATP7BP35670 1465 aa29.16■■■□□ 2.26
RPUSD3-213ENST00000472381 FAM83GA6ND36 823 aa29.15■■■□□ 2.26
RPUSD3-213ENST00000472381 PAK3O75914 559 aaPredicted RBP29.14■■■□□ 2.26
RPUSD3-213ENST00000472381 NUDT16Q96DE0 195 aaKnown RBP29.14■■■□□ 2.26
RPUSD3-213ENST00000472381 BRWD3Q6RI45 1802 aa29.14■■■□□ 2.26
RPUSD3-213ENST00000472381 COL14A1Q05707 1796 aaKnown RBP29.12■■■□□ 2.25
RPUSD3-213ENST00000472381 CDK19Q9BWU1 502 aa29.11■■■□□ 2.25
RPUSD3-213ENST00000472381 SEPT12Q8IYM1 358 aa29.1■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms