RNA–Protein interactions for RNA: ENST00000471682.1

COMMD6-208, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-208ENST00000471682 CADPS2Q86UW7 1296 aa21.63■■□□□ 1.05
COMMD6-208ENST00000471682 CENPJQ9HC77 1338 aaPredicted RBP21.62■■□□□ 1.05
COMMD6-208ENST00000471682 TOM1O60784 492 aa21.62■■□□□ 1.05
COMMD6-208ENST00000471682 NALCNQ8IZF0 1738 aa21.61■■□□□ 1.05
COMMD6-208ENST00000471682 ZEB1P37275 1124 aaPredicted RBP21.61■■□□□ 1.05
COMMD6-208ENST00000471682 ADGRB2O60241 1585 aa21.61■■□□□ 1.05
COMMD6-208ENST00000471682 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
COMMD6-208ENST00000471682 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.6■■□□□ 1.05
COMMD6-208ENST00000471682 ATF3P18847 181 aa21.6■■□□□ 1.05
COMMD6-208ENST00000471682 SBNO2Q9Y2G9 1366 aa21.6■■□□□ 1.05
COMMD6-208ENST00000471682 SLC24A1O60721 1099 aa21.59■■□□□ 1.05
COMMD6-208ENST00000471682 USP47Q96K76 1375 aa21.57■■□□□ 1.04
COMMD6-208ENST00000471682 SAFB2Q14151 953 aaKnown RBP eCLIP21.56■■□□□ 1.04
COMMD6-208ENST00000471682 UBAP1LF5GYI3 381 aa21.55■■□□□ 1.04
COMMD6-208ENST00000471682 SLAIN2Q9P270 581 aa21.54■■□□□ 1.04
COMMD6-208ENST00000471682 MINK1Q8N4C8 1332 aaPredicted RBP21.54■■□□□ 1.04
COMMD6-208ENST00000471682 QRICH2Q9H0J4 1663 aa21.53■■□□□ 1.04
COMMD6-208ENST00000471682 WASLO00401 505 aaPredicted RBP21.53■■□□□ 1.04
COMMD6-208ENST00000471682 MST1RQ04912 1400 aa21.53■■□□□ 1.04
COMMD6-208ENST00000471682 ST20-MTHFSA0A0A6YYL1 179 aa21.51■■□□□ 1.03
COMMD6-208ENST00000471682 FMN2Q9NZ56 1722 aa21.5■■□□□ 1.03
COMMD6-208ENST00000471682 ANKARQ7Z5J8 1434 aa21.5■■□□□ 1.03
COMMD6-208ENST00000471682 EIF4G2P78344 907 aaKnown RBP eCLIP21.5■■□□□ 1.03
COMMD6-208ENST00000471682 FBXO41Q8TF61 875 aa21.5■■□□□ 1.03
COMMD6-208ENST00000471682 HIRIP3Q9BW71 556 aaPredicted RBP21.49■■□□□ 1.03
COMMD6-208ENST00000471682 EVC2Q86UK5 1308 aa21.49■■□□□ 1.03
COMMD6-208ENST00000471682 C1orf167Q5SNV9 1468 aa21.48■■□□□ 1.03
COMMD6-208ENST00000471682 TESK2Q96S53 571 aa21.48■■□□□ 1.03
COMMD6-208ENST00000471682 TULP4Q9NRJ4 1543 aa21.47■■□□□ 1.03
COMMD6-208ENST00000471682 PUS7Q96PZ0 661 aaKnown RBP21.47■■□□□ 1.03
COMMD6-208ENST00000471682 CDK19Q9BWU1 502 aa21.47■■□□□ 1.03
COMMD6-208ENST00000471682 ATP7BP35670 1465 aa21.41■■□□□ 1.02
COMMD6-208ENST00000471682 HSPA5P11021 654 aaKnown RBP21.41■■□□□ 1.02
COMMD6-208ENST00000471682 PIP4K2BP78356 416 aa21.41■■□□□ 1.02
COMMD6-208ENST00000471682 SRPK2P78362 688 aaKnown RBP21.41■■□□□ 1.02
COMMD6-208ENST00000471682 TMF1P82094 1093 aa21.41■■□□□ 1.02
COMMD6-208ENST00000471682 BRINP3Q76B58 766 aa21.41■■□□□ 1.02
COMMD6-208ENST00000471682 NUDT16Q96DE0 195 aaKnown RBP21.41■■□□□ 1.02
COMMD6-208ENST00000471682 CCDC61Q9Y6R9 512 aa21.41■■□□□ 1.02
COMMD6-208ENST00000471682 USP32Q8NFA0 1604 aa21.4■■□□□ 1.02
COMMD6-208ENST00000471682 PRR36Q9H6K5 1346 aa21.4■■□□□ 1.02
COMMD6-208ENST00000471682 CDCA8Q53HL2 280 aa21.4■■□□□ 1.02
COMMD6-208ENST00000471682 ROBO1Q9Y6N7 1651 aa21.4■■□□□ 1.02
COMMD6-208ENST00000471682 ATAD2Q6PL18 1390 aa21.39■■□□□ 1.02
COMMD6-208ENST00000471682 ESCO1Q5FWF5 840 aa21.39■■□□□ 1.01
COMMD6-208ENST00000471682 NUTM2FA1L443 756 aa21.38■■□□□ 1.01
COMMD6-208ENST00000471682 ORAI2Q96SN7 254 aa21.38■■□□□ 1.01
COMMD6-208ENST00000471682 KIF1AQ12756 1690 aa21.37■■□□□ 1.01
COMMD6-208ENST00000471682 SCAF1Q9H7N4 1312 aaKnown RBP21.37■■□□□ 1.01
COMMD6-208ENST00000471682 CABP2Q9NPB3 220 aa21.37■■□□□ 1.01
COMMD6-208ENST00000471682 ITSN1Q15811 1721 aa21.37■■□□□ 1.01
COMMD6-208ENST00000471682 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
COMMD6-208ENST00000471682 PLEKHG3A1L390 1219 aa21.35■■□□□ 1.01
COMMD6-208ENST00000471682 AHDC1Q5TGY3 1603 aaPredicted RBP21.35■■□□□ 1.01
COMMD6-208ENST00000471682 RGPD8O14715 1765 aaPredicted RBP21.35■■□□□ 1.01
COMMD6-208ENST00000471682 TOPAZ1Q8N9V7 1692 aa21.34■■□□□ 1.01
COMMD6-208ENST00000471682 NPHP3Q7Z494 1330 aa21.33■■□□□ 1.01
COMMD6-208ENST00000471682 DISP3Q9P2K9 1392 aa21.33■■□□□ 1
COMMD6-208ENST00000471682 NINLQ9Y2I6 1382 aa21.33■■□□□ 1
COMMD6-208ENST00000471682 NHSL1Q5SYE7 1610 aa21.33■■□□□ 1
COMMD6-208ENST00000471682 PPIP5K1Q6PFW1 1433 aa21.31■■□□□ 1
COMMD6-208ENST00000471682 POLR3AO14802 1390 aaPredicted RBP21.31■■□□□ 1
COMMD6-208ENST00000471682 SOS2Q07890 1332 aaPredicted RBP21.29■■□□□ 1
COMMD6-208ENST00000471682 FOXO3O43524 673 aa21.29■■□□□ 1
COMMD6-208ENST00000471682 CABP1Q9NZU7 370 aa21.28■■□□□ 1
COMMD6-208ENST00000471682 BRD4O60885 1362 aaPredicted RBP21.27■■□□□ 1
COMMD6-208ENST00000471682 NGDNQ8NEJ9 315 aaKnown RBP21.27■■□□□ 1
COMMD6-208ENST00000471682 PMFBP1Q8TBY8 1022 aa21.27■■□□□ 1
COMMD6-208ENST00000471682 HSPA1LP34931 641 aa21.26■□□□□ 0.99
COMMD6-208ENST00000471682 PSME1Q06323 249 aa21.26■□□□□ 0.99
COMMD6-208ENST00000471682 ZNF692Q9BU19 519 aaPredicted RBP21.26■□□□□ 0.99
COMMD6-208ENST00000471682 ACEP12821 1306 aa21.26■□□□□ 0.99
COMMD6-208ENST00000471682 PHLPP1O60346 1717 aa21.25■□□□□ 0.99
COMMD6-208ENST00000471682 PXDNQ92626 1479 aa21.25■□□□□ 0.99
COMMD6-208ENST00000471682 LRRC59Q96AG4 307 aaKnown RBP21.24■□□□□ 0.99
COMMD6-208ENST00000471682 COL16A1Q07092 1604 aaPredicted RBP21.24■□□□□ 0.99
COMMD6-208ENST00000471682 SBNO1A3KN83 1393 aa21.23■□□□□ 0.99
COMMD6-208ENST00000471682 CPSF1Q10570 1443 aaKnown RBP21.23■□□□□ 0.99
COMMD6-208ENST00000471682 KRT28Q7Z3Y7 464 aa21.23■□□□□ 0.99
COMMD6-208ENST00000471682 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
COMMD6-208ENST00000471682 TMC1Q8TDI8 760 aa21.22■□□□□ 0.99
COMMD6-208ENST00000471682 TERF2IPQ9NYB0 399 aa21.22■□□□□ 0.99
COMMD6-208ENST00000471682 DDX17Q92841 729 aaKnown RBP21.21■□□□□ 0.99
COMMD6-208ENST00000471682 SLC12A5Q9H2X9 1139 aa21.21■□□□□ 0.99
COMMD6-208ENST00000471682 C11orf95C9JLR9 678 aaPredicted RBP21.2■□□□□ 0.98
COMMD6-208ENST00000471682 CD163L1Q9NR16 1453 aa21.2■□□□□ 0.98
COMMD6-208ENST00000471682 HDGFL2Q7Z4V5 671 aaPredicted RBP21.19■□□□□ 0.98
COMMD6-208ENST00000471682 KIF7Q2M1P5 1343 aa21.19■□□□□ 0.98
COMMD6-208ENST00000471682 ANKRD36BQ8N2N9 1353 aa21.19■□□□□ 0.98
COMMD6-208ENST00000471682 JCADQ9P266 1359 aa21.19■□□□□ 0.98
COMMD6-208ENST00000471682 USP6P35125 1406 aa21.19■□□□□ 0.98
COMMD6-208ENST00000471682 SPATA31A3Q5VYP0 1347 aa21.18■□□□□ 0.98
COMMD6-208ENST00000471682 AKAP12Q02952 1782 aa21.18■□□□□ 0.98
COMMD6-208ENST00000471682 TNS3Q68CZ2 1445 aa21.17■□□□□ 0.98
COMMD6-208ENST00000471682 SSH2Q76I76 1423 aa21.17■□□□□ 0.98
COMMD6-208ENST00000471682 TRPM3Q9HCF6 1732 aaPredicted RBP21.17■□□□□ 0.98
COMMD6-208ENST00000471682 ARHGEF10O15013 1369 aa21.16■□□□□ 0.98
COMMD6-208ENST00000471682 KTN1Q86UP2 1357 aaKnown RBP21.16■□□□□ 0.98
COMMD6-208ENST00000471682 CCDC7Q96M83 1385 aa21.16■□□□□ 0.98
COMMD6-208ENST00000471682 XPCQ01831 940 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 379.1 ms