RNA–Protein interactions for RNA: ENST00000471595.5

PCCB-210, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCCB, Length 6,090 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-210ENST00000471595 SNAPC4Q5SXM2 1469 aa15.79■□□□□ 0.12
PCCB-210ENST00000471595 BECN2A8MW95 431 aa15.79■□□□□ 0.12
PCCB-210ENST00000471595 ERC2O15083 957 aa15.79■□□□□ 0.12
PCCB-210ENST00000471595 GCC1Q96CN9 775 aa15.79■□□□□ 0.12
PCCB-210ENST00000471595 ANKRD30BQ9BXX2 1392 aa15.79■□□□□ 0.12
PCCB-210ENST00000471595 CDK13Q14004 1512 aaKnown RBP15.79■□□□□ 0.12
PCCB-210ENST00000471595 TTC5Q8N0Z6 440 aa15.78■□□□□ 0.12
PCCB-210ENST00000471595 IQGAP2Q13576 1575 aa15.78■□□□□ 0.12
PCCB-210ENST00000471595 EXOSC9Q06265 439 aaKnown RBP15.78■□□□□ 0.12
PCCB-210ENST00000471595 FOXD4L6Q3SYB3 417 aaPredicted RBP15.78■□□□□ 0.12
PCCB-210ENST00000471595 FOXD4L3Q6VB84 417 aaPredicted RBP15.78■□□□□ 0.12
PCCB-210ENST00000471595 G3BP1Q13283 466 aaKnown RBP eCLIP15.77■□□□□ 0.124e-6■■■□□ 16.9
PCCB-210ENST00000471595 MCTP1Q6DN14 999 aa15.77■□□□□ 0.11
PCCB-210ENST00000471595 TOMM22Q9NS69 142 aa15.77■□□□□ 0.11
PCCB-210ENST00000471595 CPLX2Q6PUV4 134 aaKnown RBP15.77■□□□□ 0.11
PCCB-210ENST00000471595 SMC3Q9UQE7 1217 aa15.77■□□□□ 0.11
PCCB-210ENST00000471595 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.76■□□□□ 0.11
PCCB-210ENST00000471595 BCAR3O75815 825 aa15.76■□□□□ 0.11
PCCB-210ENST00000471595 RASSF8Q8NHQ8 419 aa15.76■□□□□ 0.11
PCCB-210ENST00000471595 NECTIN2Q92692 538 aa15.75■□□□□ 0.11
PCCB-210ENST00000471595 GNAI3P08754 354 aa15.75■□□□□ 0.11
PCCB-210ENST00000471595 PRKAR2BP31323 418 aa15.75■□□□□ 0.11
PCCB-210ENST00000471595 PEG3Q9GZU2 1588 aa15.74■□□□□ 0.11
PCCB-210ENST00000471595 RPGRIP1LQ68CZ1 1315 aa15.74■□□□□ 0.11
PCCB-210ENST00000471595 TRAK2O60296 914 aa15.74■□□□□ 0.11
PCCB-210ENST00000471595 TPM3P06753 285 aa15.74■□□□□ 0.11
PCCB-210ENST00000471595 UBTFL1P0CB47 393 aaPredicted RBP15.74■□□□□ 0.11
PCCB-210ENST00000471595 GOLGA6L1Q8N7Z2 621 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 MCM2P49736 904 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 RABEP1Q15276 862 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 CYB5RLQ6IPT4 315 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 SYNE3Q6ZMZ3 975 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 FAM43AQ8N2R8 423 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 BIVM-ERCC5R4GMW8 1640 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 SLC12A5Q9H2X9 1139 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 CAMSAP2Q08AD1 1489 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 GAS2L2Q8NHY3 880 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 NOB1Q9ULX3 412 aaKnown RBP15.73■□□□□ 0.11
PCCB-210ENST00000471595 CCDC141Q6ZP82 1450 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 ABCC5O15440 1437 aa15.73■□□□□ 0.11
PCCB-210ENST00000471595 PSME1Q06323 249 aa15.72■□□□□ 0.11
PCCB-210ENST00000471595 TWISTNBQ3B726 338 aaPredicted RBP15.72■□□□□ 0.11
PCCB-210ENST00000471595 MVPQ14764 893 aaKnown RBP15.72■□□□□ 0.11
PCCB-210ENST00000471595 CCDC30Q5VVM6 783 aa15.72■□□□□ 0.11
PCCB-210ENST00000471595 NCOA1Q15788 1441 aa15.72■□□□□ 0.11
PCCB-210ENST00000471595 AKAP17AQ02040 695 aaKnown RBP15.72■□□□□ 0.11
PCCB-210ENST00000471595 TMX4Q9H1E5 349 aaPredicted RBP15.72■□□□□ 0.11
PCCB-210ENST00000471595 SLFN5Q08AF3 891 aa15.71■□□□□ 0.11
PCCB-210ENST00000471595 BICD2Q8TD16 824 aa15.71■□□□□ 0.11
PCCB-210ENST00000471595 CCDC9Q9Y3X0 531 aaKnown RBP15.71■□□□□ 0.11
PCCB-210ENST00000471595 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.71■□□□□ 0.11
PCCB-210ENST00000471595 BICRAQ9NZM4 1560 aa15.71■□□□□ 0.1
PCCB-210ENST00000471595 PRAM1Q96QH2 718 aa15.71■□□□□ 0.1
PCCB-210ENST00000471595 FRAT2O75474 233 aaPredicted RBP15.7■□□□□ 0.1
PCCB-210ENST00000471595 VPS37CA5D8V6 355 aaPredicted RBP15.7■□□□□ 0.1
PCCB-210ENST00000471595 NASPP49321 788 aaPredicted RBP15.7■□□□□ 0.1
PCCB-210ENST00000471595 TRIM29Q14134 588 aa15.7■□□□□ 0.1
PCCB-210ENST00000471595 ATF7IPQ6VMQ6 1270 aa15.7■□□□□ 0.1
PCCB-210ENST00000471595 CNTROBQ8N137 903 aa15.7■□□□□ 0.1
PCCB-210ENST00000471595 MBD3O95983 291 aa15.7■□□□□ 0.1
PCCB-210ENST00000471595 FAM69CQ0P6D2 419 aa15.7■□□□□ 0.1
PCCB-210ENST00000471595 SLC52A1Q9NWF4 448 aa15.7■□□□□ 0.1
PCCB-210ENST00000471595 ZNF428Q96B54 188 aa15.69■□□□□ 0.1
PCCB-210ENST00000471595 LAMC3Q9Y6N6 1575 aa15.69■□□□□ 0.1
PCCB-210ENST00000471595 TSR2Q969E8 191 aaKnown RBP15.69■□□□□ 0.1
PCCB-210ENST00000471595 MAGI1Q96QZ7 1491 aaPredicted RBP15.69■□□□□ 0.1
PCCB-210ENST00000471595 CPLX1O14810 134 aa15.69■□□□□ 0.1
PCCB-210ENST00000471595 TPD52L1Q16890 204 aaPredicted RBP15.69■□□□□ 0.1
PCCB-210ENST00000471595 CLSTN1O94985 981 aa15.69■□□□□ 0.1
PCCB-210ENST00000471595 TPM1P09493 284 aa15.68■□□□□ 0.1
PCCB-210ENST00000471595 PSMA5P28066 241 aa15.68■□□□□ 0.1
PCCB-210ENST00000471595 GTF2E1P29083 439 aaPredicted RBP15.68■□□□□ 0.1
PCCB-210ENST00000471595 CCDC39Q9UFE4 941 aa15.68■□□□□ 0.1
PCCB-210ENST00000471595 RPRD2Q5VT52 1461 aaKnown RBP15.68■□□□□ 0.1
PCCB-210ENST00000471595 ATAD2Q6PL18 1390 aa15.68■□□□□ 0.1
PCCB-210ENST00000471595 SASS6Q6UVJ0 657 aa15.68■□□□□ 0.1
PCCB-210ENST00000471595 LETM1O95202 739 aaPredicted RBP15.68■□□□□ 0.1
PCCB-210ENST00000471595 NOC3LQ8WTT2 800 aaKnown RBP15.68■□□□□ 0.1
PCCB-210ENST00000471595 TRDNQ13061 729 aa15.67■□□□□ 0.1
PCCB-210ENST00000471595 TSR1Q2NL82 804 aaKnown RBP15.67■□□□□ 0.1
PCCB-210ENST00000471595 CREBRFQ8IUR6 639 aa15.67■□□□□ 0.1
PCCB-210ENST00000471595 HOOK1Q9UJC3 728 aaKnown RBP15.67■□□□□ 0.1
PCCB-210ENST00000471595 C11orf95C9JLR9 678 aaPredicted RBP15.67■□□□□ 0.1
PCCB-210ENST00000471595 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
PCCB-210ENST00000471595 CWC22Q9HCG8 908 aaKnown RBP15.67■□□□□ 0.1
PCCB-210ENST00000471595 CDK19Q9BWU1 502 aa15.66■□□□□ 0.1
PCCB-210ENST00000471595 GNAI2P04899 355 aa15.66■□□□□ 0.1
PCCB-210ENST00000471595 CLASRPQ8N2M8 674 aaKnown RBP15.66■□□□□ 0.1
PCCB-210ENST00000471595 KIF14Q15058 1648 aa15.65■□□□□ 0.1
PCCB-210ENST00000471595 NLRP6P59044 892 aa15.65■□□□□ 0.1
PCCB-210ENST00000471595 WWC1Q8IX03 1113 aa15.65■□□□□ 0.1
PCCB-210ENST00000471595 RAPGEF4Q8WZA2 1011 aa15.65■□□□□ 0.1
PCCB-210ENST00000471595 RIC3Q7Z5B4 369 aa15.65■□□□□ 0.1
PCCB-210ENST00000471595 CCT4P50991 539 aaKnown RBP15.65■□□□□ 0.1
PCCB-210ENST00000471595 CCDC73Q6ZRK6 1079 aa15.65■□□□□ 0.1
PCCB-210ENST00000471595 EVA1CP58658 441 aa15.65■□□□□ 0.1
PCCB-210ENST00000471595 ARHGEF11O15085 1522 aa15.65■□□□□ 0.1
PCCB-210ENST00000471595 HIP1O00291 1037 aa15.64■□□□□ 0.09
PCCB-210ENST00000471595 TPM2P07951 284 aa15.64■□□□□ 0.09
PCCB-210ENST00000471595 NEK4P51957 841 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms