RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 TRIM67Q6ZTA4 783 aa7.97□□□□□ -1.13
COPS3-206ENST00000471414 NUTM1Q86Y26 1132 aa7.97□□□□□ -1.13
COPS3-206ENST00000471414 USB1Q9BQ65 265 aaKnown RBP7.97□□□□□ -1.13
COPS3-206ENST00000471414 BEGAINQ9BUH8 593 aa7.97□□□□□ -1.13
COPS3-206ENST00000471414 GJA5P36382 358 aa7.96□□□□□ -1.14
COPS3-206ENST00000471414 FCF1Q9Y324 198 aaKnown RBP7.95□□□□□ -1.14
COPS3-206ENST00000471414 MOXD2PA6NHM9 499 aa7.94□□□□□ -1.14
COPS3-206ENST00000471414 NDUFV2P19404 249 aa7.94□□□□□ -1.14
COPS3-206ENST00000471414 RPIAP49247 311 aa7.94□□□□□ -1.14
COPS3-206ENST00000471414 LAPTM4AQ15012 233 aa7.94□□□□□ -1.14
COPS3-206ENST00000471414 ZNF598Q86UK7 904 aaKnown RBP7.94□□□□□ -1.14
COPS3-206ENST00000471414 TBC1D2Q9BYX2 928 aa7.94□□□□□ -1.14
COPS3-206ENST00000471414 FDX1P10109 184 aa7.93□□□□□ -1.14
COPS3-206ENST00000471414 RETREG3Q86VR2 466 aa7.93□□□□□ -1.14
COPS3-206ENST00000471414 SYMPKQ92797 1274 aaKnown RBP7.93□□□□□ -1.14
COPS3-206ENST00000471414 NRG2O14511 850 aaPredicted RBP7.92□□□□□ -1.14
COPS3-206ENST00000471414 LCE2BO14633 110 aa7.92□□□□□ -1.14
COPS3-206ENST00000471414 PRR20EP86478 221 aa7.92□□□□□ -1.14
COPS3-206ENST00000471414 PRR20CP86479 221 aa7.92□□□□□ -1.14
COPS3-206ENST00000471414 PRR20DP86480 221 aa7.92□□□□□ -1.14
COPS3-206ENST00000471414 PRR20BP86481 221 aa7.92□□□□□ -1.14
COPS3-206ENST00000471414 PRR20AP86496 221 aa7.92□□□□□ -1.14
COPS3-206ENST00000471414 DIXDC1Q155Q3 683 aa7.92□□□□□ -1.14
COPS3-206ENST00000471414 RSBN1LQ6PCB5 846 aaPredicted RBP7.92□□□□□ -1.14
COPS3-206ENST00000471414 SPTLC1O15269 473 aa7.91□□□□□ -1.14
COPS3-206ENST00000471414 GFRA3O60609 400 aa7.91□□□□□ -1.14
COPS3-206ENST00000471414 GDF9O60383 454 aa7.9□□□□□ -1.14
COPS3-206ENST00000471414 JUNDP17535 347 aa7.9□□□□□ -1.14
COPS3-206ENST00000471414 ZNF697Q5TEC3 545 aa7.9□□□□□ -1.14
COPS3-206ENST00000471414 PDZRN3Q9UPQ7 1066 aa7.9□□□□□ -1.14
COPS3-206ENST00000471414 TUSC1Q2TAM9 212 aa7.89□□□□□ -1.15
COPS3-206ENST00000471414 PKD2L1Q9P0L9 805 aa7.89□□□□□ -1.15
COPS3-206ENST00000471414 SPDYE5A6NIY4 337 aa7.87□□□□□ -1.15
COPS3-206ENST00000471414 MTMR2Q13614 643 aa7.87□□□□□ -1.15
COPS3-206ENST00000471414 MYSM1Q5VVJ2 828 aa7.87□□□□□ -1.15
COPS3-206ENST00000471414 DESI1Q6ICB0 168 aa7.87□□□□□ -1.15
COPS3-206ENST00000471414 PCDHB15Q9Y5E8 787 aa7.87□□□□□ -1.15
COPS3-206ENST00000471414 C6orf229H3BNL8 230 aa7.86□□□□□ -1.15
COPS3-206ENST00000471414 PRPF38BQ5VTL8 546 aaKnown RBP7.86□□□□□ -1.15
COPS3-206ENST00000471414 RIC3Q7Z5B4 369 aa7.86□□□□□ -1.15
COPS3-206ENST00000471414 TRIM32Q13049 653 aa7.85□□□□□ -1.15
COPS3-206ENST00000471414 KDM4CQ9H3R0 1056 aa7.85□□□□□ -1.15
COPS3-206ENST00000471414 LIMD1Q9UGP4 676 aa7.85□□□□□ -1.15
COPS3-206ENST00000471414 CD2BP2O95400 341 aaKnown RBP7.84□□□□□ -1.15
COPS3-206ENST00000471414 HRCP23327 699 aa7.84□□□□□ -1.15
COPS3-206ENST00000471414 PTPRNQ16849 979 aa7.84□□□□□ -1.15
COPS3-206ENST00000471414 Q6ZNB5 142 aa7.84□□□□□ -1.15
COPS3-206ENST00000471414 PRR7Q8TB68 274 aa7.84□□□□□ -1.15
COPS3-206ENST00000471414 GPBP1L1Q9HC44 474 aaPredicted RBP7.84□□□□□ -1.15
COPS3-206ENST00000471414 CFAP99D6REC4 459 aa7.83□□□□□ -1.16
COPS3-206ENST00000471414 ZBTB3Q9H5J0 574 aa7.83□□□□□ -1.16
COPS3-206ENST00000471414 PLEKHG3A1L390 1219 aa7.82□□□□□ -1.16
COPS3-206ENST00000471414 LILRB3O75022 631 aa7.82□□□□□ -1.16
COPS3-206ENST00000471414 PTCRAQ6ISU1 281 aaPredicted RBP7.82□□□□□ -1.16
COPS3-206ENST00000471414 NUDT12Q9BQG2 462 aa7.82□□□□□ -1.16
COPS3-206ENST00000471414 TOR4AQ9NXH8 423 aa7.82□□□□□ -1.16
COPS3-206ENST00000471414 TNFRSF10AO00220 468 aa7.81□□□□□ -1.16
COPS3-206ENST00000471414 WNT7AO00755 349 aa7.81□□□□□ -1.16
COPS3-206ENST00000471414 ZBTB24O43167 697 aaPredicted RBP7.81□□□□□ -1.16
COPS3-206ENST00000471414 CCNYL3P0C7X3 344 aa7.81□□□□□ -1.16
COPS3-206ENST00000471414 QPCTQ16769 361 aa7.81□□□□□ -1.16
COPS3-206ENST00000471414 CABLES1Q8TDN4 633 aa7.81□□□□□ -1.16
COPS3-206ENST00000471414 FAM117AQ9C073 453 aa7.81□□□□□ -1.16
COPS3-206ENST00000471414 EVA1BQ9NVM1 165 aa7.81□□□□□ -1.16
COPS3-206ENST00000471414 CLK2P49760 499 aaKnown RBP7.8□□□□□ -1.16
COPS3-206ENST00000471414 SKOR1P84550 965 aa7.8□□□□□ -1.16
COPS3-206ENST00000471414 LYPD8Q6UX82 237 aa7.8□□□□□ -1.16
COPS3-206ENST00000471414 RSPH6AQ9H0K4 717 aa7.8□□□□□ -1.16
COPS3-206ENST00000471414 DGAT1O75907 488 aa7.79□□□□□ -1.16
COPS3-206ENST00000471414 WNT7BP56706 349 aa7.79□□□□□ -1.16
COPS3-206ENST00000471414 SH3D19Q5HYK7 790 aa7.79□□□□□ -1.16
COPS3-206ENST00000471414 TRAF7Q6Q0C0 670 aa7.79□□□□□ -1.16
COPS3-206ENST00000471414 CCDC24Q8N4L8 307 aa7.79□□□□□ -1.16
COPS3-206ENST00000471414 F12P00748 615 aaPredicted RBP7.78□□□□□ -1.16
COPS3-206ENST00000471414 DDRGK1Q96HY6 314 aa7.78□□□□□ -1.16
COPS3-206ENST00000471414 KCNH2Q12809 1159 aa7.77□□□□□ -1.17
COPS3-206ENST00000471414 FOXC1Q12948 553 aa7.77□□□□□ -1.17
COPS3-206ENST00000471414 SKIV2LQ15477 1246 aaKnown RBP7.77□□□□□ -1.17
COPS3-206ENST00000471414 FBXO31Q5XUX0 539 aaPredicted RBP7.77□□□□□ -1.17
COPS3-206ENST00000471414 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.77□□□□□ -1.17
COPS3-206ENST00000471414 MYT1Q01538 1121 aa7.76□□□□□ -1.17
COPS3-206ENST00000471414 MRGPRX2Q96LB1 330 aa7.76□□□□□ -1.17
COPS3-206ENST00000471414 UNC93B1Q9H1C4 597 aa7.76□□□□□ -1.17
COPS3-206ENST00000471414 PER1O15534 1290 aaPredicted RBP7.75□□□□□ -1.17
COPS3-206ENST00000471414 AVPP01185 164 aa7.75□□□□□ -1.17
COPS3-206ENST00000471414 CSPP1Q1MSJ5 1256 aa7.75□□□□□ -1.17
COPS3-206ENST00000471414 RTL5Q5HYW3 569 aaPredicted RBP7.75□□□□□ -1.17
COPS3-206ENST00000471414 CRIPAKQ8N1N5 446 aa7.75□□□□□ -1.17
COPS3-206ENST00000471414 POLR3EQ9NVU0 708 aa7.75□□□□□ -1.17
COPS3-206ENST00000471414 SH3BP2P78314 561 aa7.74□□□□□ -1.17
COPS3-206ENST00000471414 PKDCCQ504Y2 493 aa7.74□□□□□ -1.17
COPS3-206ENST00000471414 RC3H1Q5TC82 1133 aaKnown RBP7.74□□□□□ -1.17
COPS3-206ENST00000471414 PPP2R2DQ66LE6 453 aa7.74□□□□□ -1.17
COPS3-206ENST00000471414 FAM187AA6NFU0 413 aa7.73□□□□□ -1.17
COPS3-206ENST00000471414 SIAH2O43255 324 aa7.73□□□□□ -1.17
COPS3-206ENST00000471414 BRPF1P55201 1214 aaPredicted RBP7.73□□□□□ -1.17
COPS3-206ENST00000471414 SNIP1Q8TAD8 396 aaKnown RBP7.73□□□□□ -1.17
COPS3-206ENST00000471414 SMPD1P17405 629 aa7.72□□□□□ -1.17
COPS3-206ENST00000471414 CYP4X1Q8N118 509 aa7.72□□□□□ -1.17
COPS3-206ENST00000471414 PROCA1Q8NCQ7 364 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms