RNA–Protein interactions for RNA: ENST00000471027.1

SCG5-204, Transcript of secretogranin V, humanhuman

TSL 2

Gene SCG5, Length 659 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-204ENST00000471027 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
SCG5-204ENST00000471027 PIK3C2GO75747 1445 aa13.09□□□□□ -0.31
SCG5-204ENST00000471027 RBM6P78332 1123 aaKnown RBP13.09□□□□□ -0.31
SCG5-204ENST00000471027 C8orf37Q96NL8 207 aa13.09□□□□□ -0.31
SCG5-204ENST00000471027 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
SCG5-204ENST00000471027 AFF2P51816 1311 aa13.09□□□□□ -0.31
SCG5-204ENST00000471027 PSME1Q06323 249 aa13.08□□□□□ -0.32
SCG5-204ENST00000471027 LRP6O75581 1613 aa13.08□□□□□ -0.32
SCG5-204ENST00000471027 RAB3GAP2Q9H2M9 1393 aa13.07□□□□□ -0.32
SCG5-204ENST00000471027 QTRT2Q9H974 415 aaKnown RBP13.07□□□□□ -0.32
SCG5-204ENST00000471027 CDC42BPGQ6DT37 1551 aa13.07□□□□□ -0.32
SCG5-204ENST00000471027 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
SCG5-204ENST00000471027 YTHDC2Q9H6S0 1430 aaKnown RBP13.06□□□□□ -0.32
SCG5-204ENST00000471027 TMEM132EQ6IEE7 984 aa13.06□□□□□ -0.32
SCG5-204ENST00000471027 POGKQ9P215 609 aa13.06□□□□□ -0.32
SCG5-204ENST00000471027 TRPC5Q9UL62 973 aaPredicted RBP13.06□□□□□ -0.32
SCG5-204ENST00000471027 PPLO60437 1756 aa13.06□□□□□ -0.32
SCG5-204ENST00000471027 EIF3AQ14152 1382 aaKnown RBP13.06□□□□□ -0.32
SCG5-204ENST00000471027 MYOM2P54296 1465 aa13.05□□□□□ -0.32
SCG5-204ENST00000471027 FOXO3O43524 673 aa13.05□□□□□ -0.32
SCG5-204ENST00000471027 ADAMTS2O95450 1211 aa13.05□□□□□ -0.32
SCG5-204ENST00000471027 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
SCG5-204ENST00000471027 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
SCG5-204ENST00000471027 FNBP4Q8N3X1 1017 aaPredicted RBP13.04□□□□□ -0.32
SCG5-204ENST00000471027 DDX17Q92841 729 aaKnown RBP13.04□□□□□ -0.32
SCG5-204ENST00000471027 USP21Q9UK80 565 aa13.04□□□□□ -0.32
SCG5-204ENST00000471027 LAMC1P11047 1609 aa13.03□□□□□ -0.32
SCG5-204ENST00000471027 HAP1P54257 671 aaPredicted RBP13.02□□□□□ -0.33
SCG5-204ENST00000471027 CFAP70Q5T0N1 1121 aa13.02□□□□□ -0.33
SCG5-204ENST00000471027 NRXN1Q9ULB1 1477 aa13.02□□□□□ -0.33
SCG5-204ENST00000471027 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.33
SCG5-204ENST00000471027 PRAM1Q96QH2 718 aa13.01□□□□□ -0.33
SCG5-204ENST00000471027 PHF8Q9UPP1 1060 aa13.01□□□□□ -0.33
SCG5-204ENST00000471027 KRT28Q7Z3Y7 464 aa13□□□□□ -0.33
SCG5-204ENST00000471027 DCAF11Q8TEB1 546 aa13□□□□□ -0.33
SCG5-204ENST00000471027 ARHGEF10O15013 1369 aa12.99□□□□□ -0.33
SCG5-204ENST00000471027 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
SCG5-204ENST00000471027 UPF1Q92900 1129 aaKnown RBP eCLIP12.99□□□□□ -0.33
SCG5-204ENST00000471027 ANKARQ7Z5J8 1434 aa12.98□□□□□ -0.33
SCG5-204ENST00000471027 NUTM2FA1L443 756 aa12.98□□□□□ -0.33
SCG5-204ENST00000471027 CCDC125Q86Z20 511 aa12.98□□□□□ -0.33
SCG5-204ENST00000471027 SBNO1A3KN83 1393 aa12.97□□□□□ -0.33
SCG5-204ENST00000471027 GPRASP1Q5JY77 1395 aa12.97□□□□□ -0.33
SCG5-204ENST00000471027 ATAD2Q6PL18 1390 aa12.97□□□□□ -0.33
SCG5-204ENST00000471027 KDM2AQ9Y2K7 1162 aa12.97□□□□□ -0.33
SCG5-204ENST00000471027 DLC1Q96QB1 1528 aa12.97□□□□□ -0.33
SCG5-204ENST00000471027 PXDNQ92626 1479 aa12.97□□□□□ -0.33
SCG5-204ENST00000471027 KNDC1Q76NI1 1749 aa12.96□□□□□ -0.33
SCG5-204ENST00000471027 PLEKHH1Q9ULM0 1364 aa12.96□□□□□ -0.33
SCG5-204ENST00000471027 XPCQ01831 940 aaPredicted RBP12.95□□□□□ -0.34
SCG5-204ENST00000471027 TRAK1Q9UPV9 953 aa12.95□□□□□ -0.34
SCG5-204ENST00000471027 IFT172Q9UG01 1749 aa12.95□□□□□ -0.34
SCG5-204ENST00000471027 KIF1AQ12756 1690 aa12.95□□□□□ -0.34
SCG5-204ENST00000471027 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
SCG5-204ENST00000471027 SAFB2Q14151 953 aaKnown RBP eCLIP12.94□□□□□ -0.34
SCG5-204ENST00000471027 LMOD2Q6P5Q4 547 aa12.94□□□□□ -0.34
SCG5-204ENST00000471027 UNC5CLQ8IV45 518 aa12.94□□□□□ -0.34
SCG5-204ENST00000471027 GJD4Q96KN9 370 aaPredicted RBP12.94□□□□□ -0.34
SCG5-204ENST00000471027 WASLO00401 505 aaPredicted RBP12.93□□□□□ -0.34
SCG5-204ENST00000471027 TNS3Q68CZ2 1445 aa12.93□□□□□ -0.34
SCG5-204ENST00000471027 ATRNO75882 1429 aa12.92□□□□□ -0.34
SCG5-204ENST00000471027 NGDNQ8NEJ9 315 aaKnown RBP12.92□□□□□ -0.34
SCG5-204ENST00000471027 RGS12O14924 1447 aa12.91□□□□□ -0.34
SCG5-204ENST00000471027 BCL9LQ86UU0 1499 aa12.9□□□□□ -0.34
SCG5-204ENST00000471027 MINK1Q8N4C8 1332 aaPredicted RBP12.89□□□□□ -0.35
SCG5-204ENST00000471027 FMN2Q9NZ56 1722 aa12.89□□□□□ -0.35
SCG5-204ENST00000471027 PMFBP1Q8TBY8 1022 aa12.89□□□□□ -0.35
SCG5-204ENST00000471027 SF3B2Q13435 895 aaKnown RBP12.88□□□□□ -0.35
SCG5-204ENST00000471027 VPS72Q15906 364 aa12.88□□□□□ -0.35
SCG5-204ENST00000471027 HIRIP3Q9BW71 556 aaPredicted RBP12.88□□□□□ -0.35
SCG5-204ENST00000471027 CCDC9Q9Y3X0 531 aaKnown RBP12.88□□□□□ -0.35
SCG5-204ENST00000471027 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
SCG5-204ENST00000471027 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
SCG5-204ENST00000471027 ADGRB2O60241 1585 aa12.88□□□□□ -0.35
SCG5-204ENST00000471027 SLIT2O94813 1529 aa12.87□□□□□ -0.35
SCG5-204ENST00000471027 PAK3O75914 559 aaPredicted RBP12.86□□□□□ -0.35
SCG5-204ENST00000471027 TULP4Q9NRJ4 1543 aa12.86□□□□□ -0.35
SCG5-204ENST00000471027 NUDT16Q96DE0 195 aaKnown RBP12.85□□□□□ -0.35
SCG5-204ENST00000471027 ZRANB1Q9UGI0 708 aa12.85□□□□□ -0.35
SCG5-204ENST00000471027 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
SCG5-204ENST00000471027 BRD4O60885 1362 aaPredicted RBP12.83□□□□□ -0.36
SCG5-204ENST00000471027 CABLES1Q8TDN4 633 aa12.83□□□□□ -0.36
SCG5-204ENST00000471027 CDK19Q9BWU1 502 aa12.83□□□□□ -0.36
SCG5-204ENST00000471027 A0A0G2JS52 829 aa12.82□□□□□ -0.36
SCG5-204ENST00000471027 PLEKHG3A1L390 1219 aa12.82□□□□□ -0.36
SCG5-204ENST00000471027 MYT1Q01538 1121 aa12.82□□□□□ -0.36
SCG5-204ENST00000471027 SEPT12Q8IYM1 358 aa12.82□□□□□ -0.36
SCG5-204ENST00000471027 PRDM11Q9NQV5 511 aa12.82□□□□□ -0.36
SCG5-204ENST00000471027 RALGAPBQ86X10 1494 aa12.82□□□□□ -0.36
SCG5-204ENST00000471027 USP32Q8NFA0 1604 aa12.81□□□□□ -0.36
SCG5-204ENST00000471027 FAM83GA6ND36 823 aa12.81□□□□□ -0.36
SCG5-204ENST00000471027 SRPK2P78362 688 aaKnown RBP12.81□□□□□ -0.36
SCG5-204ENST00000471027 BTG4Q9NY30 223 aa12.81□□□□□ -0.36
SCG5-204ENST00000471027 CENPJQ9HC77 1338 aaPredicted RBP12.81□□□□□ -0.36
SCG5-204ENST00000471027 BLMP54132 1417 aaPredicted RBP12.8□□□□□ -0.36
SCG5-204ENST00000471027 ATP7BP35670 1465 aa12.8□□□□□ -0.36
SCG5-204ENST00000471027 KRT27Q7Z3Y8 459 aa12.8□□□□□ -0.36
SCG5-204ENST00000471027 PRR36Q9H6K5 1346 aa12.8□□□□□ -0.36
SCG5-204ENST00000471027 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.79□□□□□ -0.36
SCG5-204ENST00000471027 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms