RNA–Protein interactions for RNA: ENST00000470985.3

LDHB-206, Transcript of lactate dehydrogenase B, humanhuman

TSL 1 (best)

Gene LDHB, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHB-206ENST00000470985 FOSBP53539 338 aa12.33□□□□□ -0.44
LDHB-206ENST00000470985 ZDHHC16Q969W1 377 aa12.33□□□□□ -0.44
LDHB-206ENST00000470985 SUPT6HQ7KZ85 1726 aaKnown RBP12.33□□□□□ -0.44
LDHB-206ENST00000470985 CNTLNQ9NXG0 1405 aa12.32□□□□□ -0.44
LDHB-206ENST00000470985 BCL2L12Q9HB09 334 aa12.32□□□□□ -0.44
LDHB-206ENST00000470985 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
LDHB-206ENST00000470985 REREQ9P2R6 1566 aa12.3□□□□□ -0.44
LDHB-206ENST00000470985 ABCA6Q8N139 1617 aa12.29□□□□□ -0.44
LDHB-206ENST00000470985 DMRTA1Q5VZB9 504 aa12.29□□□□□ -0.44
LDHB-206ENST00000470985 P3H3Q8IVL6 736 aa12.28□□□□□ -0.44
LDHB-206ENST00000470985 FBXW7Q969H0 707 aa12.28□□□□□ -0.44
LDHB-206ENST00000470985 ZMYM3Q14202 1370 aa12.28□□□□□ -0.44
LDHB-206ENST00000470985 CAMK2BQ13554 666 aa12.27□□□□□ -0.45
LDHB-206ENST00000470985 RBM33Q96EV2 1170 aaKnown RBP12.27□□□□□ -0.45
LDHB-206ENST00000470985 STRCP1A6NGW2 1772 aa12.27□□□□□ -0.45
LDHB-206ENST00000470985 NUP153P49790 1475 aaKnown RBP12.27□□□□□ -0.45
LDHB-206ENST00000470985 KDM5CP41229 1560 aa12.26□□□□□ -0.45
LDHB-206ENST00000470985 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
LDHB-206ENST00000470985 POLR1AO95602 1720 aaPredicted RBP12.26□□□□□ -0.45
LDHB-206ENST00000470985 AFAP1Q8N556 730 aa12.26□□□□□ -0.45
LDHB-206ENST00000470985 RAPGEF6Q8TEU7 1601 aa12.26□□□□□ -0.45
LDHB-206ENST00000470985 MROH2AA6NES4 1674 aa12.26□□□□□ -0.45
LDHB-206ENST00000470985 GOLGA8CPA6NN73 597 aa12.25□□□□□ -0.45
LDHB-206ENST00000470985 DPYSL4O14531 572 aa12.25□□□□□ -0.45
LDHB-206ENST00000470985 PHF14O94880 888 aa12.25□□□□□ -0.45
LDHB-206ENST00000470985 HCSTQ9UBK5 93 aa12.25□□□□□ -0.45
LDHB-206ENST00000470985 DNMT1P26358 1616 aaKnown RBP12.24□□□□□ -0.45
LDHB-206ENST00000470985 E2F4Q16254 413 aa12.24□□□□□ -0.45
LDHB-206ENST00000470985 ZNF518AQ6AHZ1 1483 aa12.24□□□□□ -0.45
LDHB-206ENST00000470985 TYW1BQ6NUM6 668 aa12.24□□□□□ -0.45
LDHB-206ENST00000470985 A2ML1A8K2U0 1454 aa12.22□□□□□ -0.45
LDHB-206ENST00000470985 PLCH2O75038 1416 aa12.22□□□□□ -0.45
LDHB-206ENST00000470985 EPAS1Q99814 870 aa12.22□□□□□ -0.45
LDHB-206ENST00000470985 SLC4A5Q9BY07 1137 aa12.22□□□□□ -0.45
LDHB-206ENST00000470985 VPS9D1Q9Y2B5 631 aa12.22□□□□□ -0.45
LDHB-206ENST00000470985 LRP6O75581 1613 aa12.22□□□□□ -0.45
LDHB-206ENST00000470985 SYNMO15061 1565 aa12.22□□□□□ -0.45
LDHB-206ENST00000470985 ADAM33Q9BZ11 813 aa12.21□□□□□ -0.45
LDHB-206ENST00000470985 FAM135BQ49AJ0 1406 aa12.2□□□□□ -0.46
LDHB-206ENST00000470985 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
LDHB-206ENST00000470985 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
LDHB-206ENST00000470985 PLEKHD1A6NEE1 506 aa12.19□□□□□ -0.46
LDHB-206ENST00000470985 HRO43593 1189 aa12.19□□□□□ -0.46
LDHB-206ENST00000470985 NBPF3Q9H094 633 aa12.19□□□□□ -0.46
LDHB-206ENST00000470985 MRPL50Q8N5N7 158 aaKnown RBP12.18□□□□□ -0.46
LDHB-206ENST00000470985 CDK12Q9NYV4 1490 aaPredicted RBP12.18□□□□□ -0.46
LDHB-206ENST00000470985 NPHP4O75161 1426 aaPredicted RBP12.18□□□□□ -0.46
LDHB-206ENST00000470985 CLTCQ00610 1675 aaKnown RBP12.17□□□□□ -0.46
LDHB-206ENST00000470985 RXRBP28702 533 aa12.17□□□□□ -0.46
LDHB-206ENST00000470985 ZNF772Q68DY9 489 aaPredicted RBP12.17□□□□□ -0.46
LDHB-206ENST00000470985 KCTD12Q96CX2 325 aaKnown RBP12.17□□□□□ -0.46
LDHB-206ENST00000470985 MLH3Q9UHC1 1453 aa12.16□□□□□ -0.46
LDHB-206ENST00000470985 PPP1R3GB7ZBB8 358 aa12.16□□□□□ -0.46
LDHB-206ENST00000470985 RGS12O14924 1447 aa12.16□□□□□ -0.46
LDHB-206ENST00000470985 ZBED2Q9BTP6 218 aa12.15□□□□□ -0.46
LDHB-206ENST00000470985 ROBO1Q9Y6N7 1651 aa12.15□□□□□ -0.46
LDHB-206ENST00000470985 CDK13Q14004 1512 aaKnown RBP12.15□□□□□ -0.46
LDHB-206ENST00000470985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.15□□□□□ -0.46
LDHB-206ENST00000470985 DDX12PQ92771 950 aa12.14□□□□□ -0.47
LDHB-206ENST00000470985 MED14O60244 1454 aa12.14□□□□□ -0.47
LDHB-206ENST00000470985 EFCAB2Q5VUJ9 269 aa12.13□□□□□ -0.47
LDHB-206ENST00000470985 FAM9AQ8IZU1 332 aaPredicted RBP12.13□□□□□ -0.47
LDHB-206ENST00000470985 JCADQ9P266 1359 aa12.13□□□□□ -0.47
LDHB-206ENST00000470985 ABCC1P33527 1531 aa12.12□□□□□ -0.47
LDHB-206ENST00000470985 ANKLE2Q86XL3 938 aa12.12□□□□□ -0.47
LDHB-206ENST00000470985 XIRP1Q702N8 1843 aaKnown RBP12.11□□□□□ -0.47
LDHB-206ENST00000470985 IQGAP1P46940 1657 aa12.11□□□□□ -0.47
LDHB-206ENST00000470985 C6orf132Q5T0Z8 1188 aa12.11□□□□□ -0.47
LDHB-206ENST00000470985 MEX3CQ5U5Q3 659 aaKnown RBP12.11□□□□□ -0.47
LDHB-206ENST00000470985 NBR1Q14596 966 aa12.1□□□□□ -0.47
LDHB-206ENST00000470985 PDIA6Q15084 440 aa12.1□□□□□ -0.47
LDHB-206ENST00000470985 RABGEF1Q9UJ41 708 aa12.1□□□□□ -0.47
LDHB-206ENST00000470985 LRP5O75197 1615 aa12.1□□□□□ -0.47
LDHB-206ENST00000470985 NUTM2BA6NNL0 878 aaPredicted RBP12.09□□□□□ -0.47
LDHB-206ENST00000470985 NUTM2EB1AL46 878 aaPredicted RBP12.09□□□□□ -0.47
LDHB-206ENST00000470985 NUTM2DQ5VT03 806 aaPredicted RBP12.09□□□□□ -0.47
LDHB-206ENST00000470985 NUTM2AQ8IVF1 878 aaPredicted RBP12.09□□□□□ -0.47
LDHB-206ENST00000470985 ITSN2Q9NZM3 1697 aa12.09□□□□□ -0.47
LDHB-206ENST00000470985 SAMD9Q5K651 1589 aa12.09□□□□□ -0.47
LDHB-206ENST00000470985 DEPDC5O75140 1603 aa12.08□□□□□ -0.48
LDHB-206ENST00000470985 MAP3K7O43318 606 aa12.08□□□□□ -0.48
LDHB-206ENST00000470985 WNT2BQ93097 391 aa12.08□□□□□ -0.48
LDHB-206ENST00000470985 MYO5CQ9NQX4 1742 aa12.08□□□□□ -0.48
LDHB-206ENST00000470985 KIDINS220Q9ULH0 1771 aa12.07□□□□□ -0.48
LDHB-206ENST00000470985 PTPN5P54829 565 aa12.07□□□□□ -0.48
LDHB-206ENST00000470985 ARIH1Q9Y4X5 557 aaPredicted RBP12.07□□□□□ -0.48
LDHB-206ENST00000470985 ARHGAP5Q13017 1502 aa12.06□□□□□ -0.48
LDHB-206ENST00000470985 GRXCR2A6NFK2 248 aa12.06□□□□□ -0.48
LDHB-206ENST00000470985 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
LDHB-206ENST00000470985 YY1P25490 414 aa12.06□□□□□ -0.48
LDHB-206ENST00000470985 EP400Q96L91 3159 aa12.06□□□□□ -0.48
LDHB-206ENST00000470985 PHLPP1O60346 1717 aa12.06□□□□□ -0.48
LDHB-206ENST00000470985 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
LDHB-206ENST00000470985 PLA2G2EQ9NZK7 142 aa12.05□□□□□ -0.48
LDHB-206ENST00000470985 TNRQ92752 1358 aa12.05□□□□□ -0.48
LDHB-206ENST00000470985 COL9A1P20849 921 aa12.04□□□□□ -0.48
LDHB-206ENST00000470985 TSHZ2Q9NRE2 1034 aa12.04□□□□□ -0.48
LDHB-206ENST00000470985 COL16A1Q07092 1604 aaPredicted RBP12.04□□□□□ -0.48
LDHB-206ENST00000470985 FBXO31Q5XUX0 539 aaPredicted RBP12.03□□□□□ -0.48
LDHB-206ENST00000470985 LAPTM4BQ86VI4 370 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms