RNA–Protein interactions for RNA: ENST00000470710.1

HDLBP-233, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-233	ENST00000470710	EVC2	Q86UK5	1308 aa		12.06	□□□□□ -0.48
HDLBP-233	ENST00000470710	PLEKHH1	Q9ULM0	1364 aa		12.05	□□□□□ -0.48
HDLBP-233	ENST00000470710	WAPL	Q7Z5K2	1190 aa		12.05	□□□□□ -0.48
HDLBP-233	ENST00000470710	QRICH2	Q9H0J4	1663 aa		12.05	□□□□□ -0.48
HDLBP-233	ENST00000470710	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.04	□□□□□ -0.48
HDLBP-233	ENST00000470710	POLR3GL	Q9BT43	218 aa		12.04	□□□□□ -0.48
HDLBP-233	ENST00000470710	XRN1	Q8IZH2	1706 aa	Known RBP	12.03	□□□□□ -0.48
HDLBP-233	ENST00000470710	TULP4	Q9NRJ4	1543 aa		12.03	□□□□□ -0.48
HDLBP-233	ENST00000470710	KCNA6	P17658	529 aa		12.03	□□□□□ -0.48
HDLBP-233	ENST00000470710	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.03	□□□□□ -0.48
HDLBP-233	ENST00000470710	ATAD2	Q6PL18	1390 aa		12.01	□□□□□ -0.49
HDLBP-233	ENST00000470710	NINL	Q9Y2I6	1382 aa		12	□□□□□ -0.49
HDLBP-233	ENST00000470710	ADGRB2	O60241	1585 aa		12	□□□□□ -0.49
HDLBP-233	ENST00000470710	NWD1	Q149M9	1564 aa		12	□□□□□ -0.49
HDLBP-233	ENST00000470710	WASL	O00401	505 aa	Predicted RBP	11.99	□□□□□ -0.49
HDLBP-233	ENST00000470710	POTED	Q86YR6	584 aa		11.99	□□□□□ -0.49
HDLBP-233	ENST00000470710	CDK19	Q9BWU1	502 aa		11.99	□□□□□ -0.49
HDLBP-233	ENST00000470710	CHD2	O14647	1828 aa	Known RBP	11.98	□□□□□ -0.49
HDLBP-233	ENST00000470710	NKTR	P30414	1462 aa	Known RBP	11.98	□□□□□ -0.49
HDLBP-233	ENST00000470710	SRPK2	P78362	688 aa	Known RBP	11.98	□□□□□ -0.49
HDLBP-233	ENST00000470710	PANK3	Q9H999	370 aa		11.98	□□□□□ -0.49
HDLBP-233	ENST00000470710	CABP2	Q9NPB3	220 aa		11.98	□□□□□ -0.49
HDLBP-233	ENST00000470710	ANP32C	O43423	234 aa		11.97	□□□□□ -0.49
HDLBP-233	ENST00000470710	MIER1	Q8N108	512 aa		11.97	□□□□□ -0.49
HDLBP-233	ENST00000470710	PER1	O15534	1290 aa	Predicted RBP	11.96	□□□□□ -0.49
HDLBP-233	ENST00000470710	DMRT2	Q9Y5R5	561 aa		11.96	□□□□□ -0.49
HDLBP-233	ENST00000470710	STRC	Q7RTU9	1775 aa		11.96	□□□□□ -0.49
HDLBP-233	ENST00000470710	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	11.95	□□□□□ -0.5
HDLBP-233	ENST00000470710	MYOM1	P52179	1685 aa		11.95	□□□□□ -0.5
HDLBP-233	ENST00000470710	ADGRL3	Q9HAR2	1447 aa		11.94	□□□□□ -0.5
HDLBP-233	ENST00000470710	NCOA3	Q9Y6Q9	1424 aa		11.94	□□□□□ -0.5
HDLBP-233	ENST00000470710	TMC1	Q8TDI8	760 aa		11.94	□□□□□ -0.5
HDLBP-233	ENST00000470710	SLC12A5	Q9H2X9	1139 aa		11.94	□□□□□ -0.5
HDLBP-233	ENST00000470710	ANKRD36B	Q8N2N9	1353 aa		11.93	□□□□□ -0.5
HDLBP-233	ENST00000470710	NPC1L1	Q9UHC9	1359 aa		11.93	□□□□□ -0.5
HDLBP-233	ENST00000470710	PROSER2	Q86WR7	435 aa	Predicted RBP	11.93	□□□□□ -0.5
HDLBP-233	ENST00000470710	NUDT16	Q96DE0	195 aa	Known RBP	11.93	□□□□□ -0.5
HDLBP-233	ENST00000470710	KNSTRN	Q9Y448	316 aa		11.93	□□□□□ -0.5
HDLBP-233	ENST00000470710	CCDC61	Q9Y6R9	512 aa		11.93	□□□□□ -0.5
HDLBP-233	ENST00000470710	ANKAR	Q7Z5J8	1434 aa		11.93	□□□□□ -0.5
HDLBP-233	ENST00000470710	KTN1	Q86UP2	1357 aa	Known RBP	11.92	□□□□□ -0.5
HDLBP-233	ENST00000470710	ATP7B	P35670	1465 aa		11.92	□□□□□ -0.5
HDLBP-233	ENST00000470710	PRKRIP1	Q9H875	184 aa	Predicted RBP	11.92	□□□□□ -0.5
HDLBP-233	ENST00000470710	TERF2IP	Q9NYB0	399 aa		11.92	□□□□□ -0.5
HDLBP-233	ENST00000470710	CDC42BPG	Q6DT37	1551 aa		11.92	□□□□□ -0.5
HDLBP-233	ENST00000470710	PRR36	Q9H6K5	1346 aa		11.91	□□□□□ -0.5
HDLBP-233	ENST00000470710	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.91	□□□□□ -0.5
HDLBP-233	ENST00000470710	CARD14	Q9BXL6	1004 aa		11.91	□□□□□ -0.5
HDLBP-233	ENST00000470710	CABP1	Q9NZU7	370 aa		11.91	□□□□□ -0.5
HDLBP-233	ENST00000470710	CD163L1	Q9NR16	1453 aa		11.9	□□□□□ -0.5
HDLBP-233	ENST00000470710	PLEKHG3	A1L390	1219 aa		11.9	□□□□□ -0.5
HDLBP-233	ENST00000470710	CCER2	I3L3R5	266 aa		11.9	□□□□□ -0.5
HDLBP-233	ENST00000470710	RALBP1	Q15311	655 aa		11.9	□□□□□ -0.5
HDLBP-233	ENST00000470710	PPIP5K1	Q6PFW1	1433 aa		11.9	□□□□□ -0.5
HDLBP-233	ENST00000470710		A0A1W2PP64	1363 aa		11.9	□□□□□ -0.5
HDLBP-233	ENST00000470710	TMEM94	Q12767	1356 aa		11.9	□□□□□ -0.5
HDLBP-233	ENST00000470710	NSD3	Q9BZ95	1437 aa		11.89	□□□□□ -0.51
HDLBP-233	ENST00000470710	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	11.89	□□□□□ -0.51
HDLBP-233	ENST00000470710	PARD3	Q8TEW0	1356 aa		11.89	□□□□□ -0.51
HDLBP-233	ENST00000470710	DCC	P43146	1447 aa		11.88	□□□□□ -0.51
HDLBP-233	ENST00000470710	CPSF1	Q10570	1443 aa	Known RBP	11.88	□□□□□ -0.51
HDLBP-233	ENST00000470710	C14orf37	Q86TY3	774 aa		11.88	□□□□□ -0.51
HDLBP-233	ENST00000470710	C19orf44	Q9H6X5	657 aa		11.88	□□□□□ -0.51
HDLBP-233	ENST00000470710	CGNL1	Q0VF96	1302 aa		11.87	□□□□□ -0.51
HDLBP-233	ENST00000470710	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	11.87	□□□□□ -0.51
HDLBP-233	ENST00000470710	NALCN	Q8IZF0	1738 aa		11.87	□□□□□ -0.51
HDLBP-233	ENST00000470710	RBM33	Q96EV2	1170 aa	Known RBP	11.87	□□□□□ -0.51
HDLBP-233	ENST00000470710	NSD2	O96028	1365 aa		11.87	□□□□□ -0.51
HDLBP-233	ENST00000470710	STRCP1	A6NGW2	1772 aa		11.87	□□□□□ -0.51
HDLBP-233	ENST00000470710	USP32	Q8NFA0	1604 aa		11.86	□□□□□ -0.51
HDLBP-233	ENST00000470710	ZNF692	Q9BU19	519 aa	Predicted RBP	11.86	□□□□□ -0.51
HDLBP-233	ENST00000470710	TOPAZ1	Q8N9V7	1692 aa		11.86	□□□□□ -0.51
HDLBP-233	ENST00000470710	FMN2	Q9NZ56	1722 aa		11.86	□□□□□ -0.51
HDLBP-233	ENST00000470710	LRRC7	Q96NW7	1537 aa		11.86	□□□□□ -0.51
HDLBP-233	ENST00000470710	POLR3A	O14802	1390 aa	Predicted RBP	11.85	□□□□□ -0.51
HDLBP-233	ENST00000470710	CC2D1B	Q5T0F9	858 aa	Known RBP	11.85	□□□□□ -0.51
HDLBP-233	ENST00000470710	EDC4	Q6P2E9	1401 aa	Known RBP	11.85	□□□□□ -0.51
HDLBP-233	ENST00000470710	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.85	□□□□□ -0.51
HDLBP-233	ENST00000470710	NUTM2F	A1L443	756 aa		11.84	□□□□□ -0.51
HDLBP-233	ENST00000470710	ACE	P12821	1306 aa		11.84	□□□□□ -0.51
HDLBP-233	ENST00000470710	MSH6	P52701	1360 aa		11.83	□□□□□ -0.52
HDLBP-233	ENST00000470710	ATF3	P18847	181 aa		11.83	□□□□□ -0.52
HDLBP-233	ENST00000470710	CADPS2	Q86UW7	1296 aa		11.83	□□□□□ -0.52
HDLBP-233	ENST00000470710	PHF8	Q9UPP1	1060 aa		11.82	□□□□□ -0.52
HDLBP-233	ENST00000470710	USP6	P35125	1406 aa		11.82	□□□□□ -0.52
HDLBP-233	ENST00000470710	C1orf167	Q5SNV9	1468 aa		11.82	□□□□□ -0.52
HDLBP-233	ENST00000470710	BRD4	O60885	1362 aa	Predicted RBP	11.81	□□□□□ -0.52
HDLBP-233	ENST00000470710	ITSN1	Q15811	1721 aa		11.81	□□□□□ -0.52
HDLBP-233	ENST00000470710	MST1R	Q04912	1400 aa		11.81	□□□□□ -0.52
HDLBP-233	ENST00000470710	SSH2	Q76I76	1423 aa		11.81	□□□□□ -0.52
HDLBP-233	ENST00000470710	FYB1	O15117	783 aa		11.81	□□□□□ -0.52
HDLBP-233	ENST00000470710	NLRP13	Q86W25	1043 aa		11.81	□□□□□ -0.52
HDLBP-233	ENST00000470710	NGDN	Q8NEJ9	315 aa	Known RBP	11.81	□□□□□ -0.52
HDLBP-233	ENST00000470710	CNGB1	Q14028	1251 aa	Predicted RBP	11.8	□□□□□ -0.52
HDLBP-233	ENST00000470710	PMFBP1	Q8TBY8	1022 aa		11.8	□□□□□ -0.52
HDLBP-233	ENST00000470710	TTC21B	Q7Z4L5	1316 aa		11.8	□□□□□ -0.52
HDLBP-233	ENST00000470710	ESCO1	Q5FWF5	840 aa		11.79	□□□□□ -0.52
HDLBP-233	ENST00000470710	MORC1	Q86VD1	984 aa		11.79	□□□□□ -0.52
HDLBP-233	ENST00000470710	TTC21A	Q8NDW8	1320 aa		11.79	□□□□□ -0.52
HDLBP-233	ENST00000470710	MON2	Q7Z3U7	1717 aa		11.78	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms