RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 SPSB2Q99619 263 aa9.44□□□□□ -0.9
COL9A1-206ENST00000470652 FOXC1Q12948 553 aa9.43□□□□□ -0.9
COL9A1-206ENST00000470652 ST8SIA5O15466 376 aa9.4□□□□□ -0.9
COL9A1-206ENST00000470652 PRKCSHP14314 528 aaPredicted RBP9.39□□□□□ -0.91
COL9A1-206ENST00000470652 GRIPAP1Q4V328 841 aa9.39□□□□□ -0.91
COL9A1-206ENST00000470652 AAASQ9NRG9 546 aa9.39□□□□□ -0.91
COL9A1-206ENST00000470652 PKD2L1Q9P0L9 805 aa9.39□□□□□ -0.91
COL9A1-206ENST00000470652 KDM4AO75164 1064 aa9.38□□□□□ -0.91
COL9A1-206ENST00000470652 ATP6V1AP38606 617 aa9.38□□□□□ -0.91
COL9A1-206ENST00000470652 MS4A1P11836 297 aa9.37□□□□□ -0.91
COL9A1-206ENST00000470652 USP46P62068 366 aa9.37□□□□□ -0.91
COL9A1-206ENST00000470652 FUT2Q10981 343 aa9.37□□□□□ -0.91
COL9A1-206ENST00000470652 BEGAINQ9BUH8 593 aa9.37□□□□□ -0.91
COL9A1-206ENST00000470652 CD2BP2O95400 341 aaKnown RBP9.36□□□□□ -0.91
COL9A1-206ENST00000470652 RPIAP49247 311 aa9.36□□□□□ -0.91
COL9A1-206ENST00000470652 NUTM1Q86Y26 1132 aa9.36□□□□□ -0.91
COL9A1-206ENST00000470652 MORN1Q5T089 497 aa9.35□□□□□ -0.91
COL9A1-206ENST00000470652 FCF1Q9Y324 198 aaKnown RBP9.35□□□□□ -0.91
COL9A1-206ENST00000470652 DIXDC1Q155Q3 683 aa9.34□□□□□ -0.91
COL9A1-206ENST00000470652 KDM4CQ9H3R0 1056 aa9.34□□□□□ -0.91
COL9A1-206ENST00000470652 FMNL1O95466 1100 aaPredicted RBP9.33□□□□□ -0.92
COL9A1-206ENST00000470652 CYP4X1Q8N118 509 aa9.33□□□□□ -0.92
COL9A1-206ENST00000470652 FAM160A2Q8N612 972 aaPredicted RBP9.33□□□□□ -0.92
COL9A1-206ENST00000470652 THAP11Q96EK4 314 aa9.33□□□□□ -0.92
COL9A1-206ENST00000470652 GPBP1L1Q9HC44 474 aaPredicted RBP9.33□□□□□ -0.92
COL9A1-206ENST00000470652 SLC27A5Q9Y2P5 690 aa9.33□□□□□ -0.92
COL9A1-206ENST00000470652 TREML4Q6UXN2 200 aa9.32□□□□□ -0.92
COL9A1-206ENST00000470652 DACH1Q9UI36 760 aa9.32□□□□□ -0.92
COL9A1-206ENST00000470652 HOXA2O43364 376 aa9.31□□□□□ -0.92
COL9A1-206ENST00000470652 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
COL9A1-206ENST00000470652 SPIRE2Q8WWL2 714 aa9.31□□□□□ -0.92
COL9A1-206ENST00000470652 TOR4AQ9NXH8 423 aa9.31□□□□□ -0.92
COL9A1-206ENST00000470652 AXIN1O15169 862 aa9.29□□□□□ -0.92
COL9A1-206ENST00000470652 ZBTB24O43167 697 aaPredicted RBP9.29□□□□□ -0.92
COL9A1-206ENST00000470652 CRIPAKQ8N1N5 446 aa9.29□□□□□ -0.92
COL9A1-206ENST00000470652 DDRGK1Q96HY6 314 aa9.29□□□□□ -0.92
COL9A1-206ENST00000470652 TBC1D2Q9BYX2 928 aa9.29□□□□□ -0.92
COL9A1-206ENST00000470652 PRDM9Q9NQV7 894 aa9.29□□□□□ -0.92
COL9A1-206ENST00000470652 SALL2Q9Y467 1007 aaPredicted RBP9.29□□□□□ -0.92
COL9A1-206ENST00000470652 BRPF1P55201 1214 aaPredicted RBP9.28□□□□□ -0.92
COL9A1-206ENST00000470652 Q3C1V9 767 aa9.28□□□□□ -0.92
COL9A1-206ENST00000470652 BRICD5Q6PL45 260 aa9.28□□□□□ -0.92
COL9A1-206ENST00000470652 C11orf95C9JLR9 678 aaPredicted RBP9.27□□□□□ -0.93
COL9A1-206ENST00000470652 AVPP01185 164 aa9.27□□□□□ -0.93
COL9A1-206ENST00000470652 RSPH6AQ9H0K4 717 aa9.27□□□□□ -0.93
COL9A1-206ENST00000470652 GMPR2Q9P2T1 348 aaKnown RBP9.27□□□□□ -0.93
COL9A1-206ENST00000470652 TTC24A2A3L6 582 aaPredicted RBP9.26□□□□□ -0.93
COL9A1-206ENST00000470652 GJA5P36382 358 aa9.26□□□□□ -0.93
COL9A1-206ENST00000470652 FAM117AQ9C073 453 aa9.26□□□□□ -0.93
COL9A1-206ENST00000470652 MOXD2PA6NHM9 499 aa9.25□□□□□ -0.93
COL9A1-206ENST00000470652 FDX1P10109 184 aa9.25□□□□□ -0.93
COL9A1-206ENST00000470652 LCE2AQ5TA79 106 aaPredicted RBP9.25□□□□□ -0.93
COL9A1-206ENST00000470652 HLA-CQ95604 372 aa9.25□□□□□ -0.93
COL9A1-206ENST00000470652 NDUFV2P19404 249 aa9.24□□□□□ -0.93
COL9A1-206ENST00000470652 CTC1Q2NKJ3 1217 aa9.24□□□□□ -0.93
COL9A1-206ENST00000470652 RNF19BQ6ZMZ0 732 aa9.24□□□□□ -0.93
COL9A1-206ENST00000470652 GUCA2AQ02747 115 aa9.23□□□□□ -0.93
COL9A1-206ENST00000470652 SPTLC1O15269 473 aa9.22□□□□□ -0.93
COL9A1-206ENST00000470652 MSS51Q4VC12 460 aa9.22□□□□□ -0.93
COL9A1-206ENST00000470652 MYSM1Q5VVJ2 828 aa9.22□□□□□ -0.93
COL9A1-206ENST00000470652 RSBN1LQ6PCB5 846 aaPredicted RBP9.22□□□□□ -0.93
COL9A1-206ENST00000470652 RIC3Q7Z5B4 369 aa9.22□□□□□ -0.93
COL9A1-206ENST00000470652 WFS1O76024 890 aa9.21□□□□□ -0.94
COL9A1-206ENST00000470652 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
COL9A1-206ENST00000470652 PCDHGC3Q9UN70 934 aa9.21□□□□□ -0.94
COL9A1-206ENST00000470652 PLEKHG3A1L390 1219 aa9.2□□□□□ -0.94
COL9A1-206ENST00000470652 WNT7AO00755 349 aa9.2□□□□□ -0.94
COL9A1-206ENST00000470652 SNIP1Q8TAD8 396 aaKnown RBP9.2□□□□□ -0.94
COL9A1-206ENST00000470652 USB1Q9BQ65 265 aaKnown RBP9.2□□□□□ -0.94
COL9A1-206ENST00000470652 SPDYE5A6NIY4 337 aa9.18□□□□□ -0.94
COL9A1-206ENST00000470652 C6orf229H3BNL8 230 aa9.18□□□□□ -0.94
COL9A1-206ENST00000470652 SMPD1P17405 629 aa9.18□□□□□ -0.94
COL9A1-206ENST00000470652 TRIM32Q13049 653 aa9.18□□□□□ -0.94
COL9A1-206ENST00000470652 SKIV2LQ15477 1246 aaKnown RBP9.18□□□□□ -0.94
COL9A1-206ENST00000470652 TUSC1Q2TAM9 212 aa9.18□□□□□ -0.94
COL9A1-206ENST00000470652 SH3D19Q5HYK7 790 aa9.18□□□□□ -0.94
COL9A1-206ENST00000470652 RETREG3Q86VR2 466 aa9.18□□□□□ -0.94
COL9A1-206ENST00000470652 IL27Q8NEV9 243 aa9.18□□□□□ -0.94
COL9A1-206ENST00000470652 CLK2P49760 499 aaKnown RBP9.17□□□□□ -0.94
COL9A1-206ENST00000470652 MTMR2Q13614 643 aa9.17□□□□□ -0.94
COL9A1-206ENST00000470652 PRPF38BQ5VTL8 546 aaKnown RBP9.17□□□□□ -0.94
COL9A1-206ENST00000470652 SYMPKQ92797 1274 aaKnown RBP9.17□□□□□ -0.94
COL9A1-206ENST00000470652 MRGPRX2Q96LB1 330 aa9.17□□□□□ -0.94
COL9A1-206ENST00000470652 POLR3EQ9NVU0 708 aa9.17□□□□□ -0.94
COL9A1-206ENST00000470652 J3QL48 77 aa9.16□□□□□ -0.94
COL9A1-206ENST00000470652 MMP16P51512 607 aa9.16□□□□□ -0.94
COL9A1-206ENST00000470652 ZBTB3Q9H5J0 574 aa9.16□□□□□ -0.94
COL9A1-206ENST00000470652 GOPCQ9HD26 462 aa9.16□□□□□ -0.94
COL9A1-206ENST00000470652 LIMD1Q9UGP4 676 aa9.16□□□□□ -0.94
COL9A1-206ENST00000470652 PCDHB15Q9Y5E8 787 aa9.16□□□□□ -0.94
COL9A1-206ENST00000470652 CCDC24Q8N4L8 307 aa9.15□□□□□ -0.94
COL9A1-206ENST00000470652 ATP13A2Q9NQ11 1180 aa9.15□□□□□ -0.94
COL9A1-206ENST00000470652 SNRPBP14678 240 aaKnown RBP9.14□□□□□ -0.95
COL9A1-206ENST00000470652 HRCP23327 699 aa9.14□□□□□ -0.95
COL9A1-206ENST00000470652 NFX1Q12986 1120 aaKnown RBP9.14□□□□□ -0.95
COL9A1-206ENST00000470652 CSPP1Q1MSJ5 1256 aa9.14□□□□□ -0.95
COL9A1-206ENST00000470652 ATP1B4Q9UN42 357 aaPredicted RBP9.13□□□□□ -0.95
COL9A1-206ENST00000470652 NUTM2BA6NNL0 878 aaPredicted RBP9.12□□□□□ -0.95
COL9A1-206ENST00000470652 NUTM2EB1AL46 878 aaPredicted RBP9.12□□□□□ -0.95
COL9A1-206ENST00000470652 DXOO77932 396 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms