RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 NKX2-3Q8TAU0 364 aa9.38□□□□□ -0.91
CHD6-206ENST00000470470 PCF11O94913 1555 aaKnown RBP9.38□□□□□ -0.91
CHD6-206ENST00000470470 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.38□□□□□ -0.91
CHD6-206ENST00000470470 FMN1Q68DA7 1419 aa9.38□□□□□ -0.91
CHD6-206ENST00000470470 NPDC1Q9NQX5 325 aaPredicted RBP9.37□□□□□ -0.91
CHD6-206ENST00000470470 PBRM1Q86U86 1689 aa9.37□□□□□ -0.91
CHD6-206ENST00000470470 MRC2Q9UBG0 1479 aa9.37□□□□□ -0.91
CHD6-206ENST00000470470 THOC2Q8NI27 1593 aaKnown RBP9.36□□□□□ -0.91
CHD6-206ENST00000470470 ZPR1O75312 459 aa9.36□□□□□ -0.91
CHD6-206ENST00000470470 COPS2P61201 443 aa9.36□□□□□ -0.91
CHD6-206ENST00000470470 MYT1Q01538 1121 aa9.36□□□□□ -0.91
CHD6-206ENST00000470470 ARHGEF1Q92888 912 aaKnown RBP9.36□□□□□ -0.91
CHD6-206ENST00000470470 DGAT1O75907 488 aa9.35□□□□□ -0.91
CHD6-206ENST00000470470 PKDCCQ504Y2 493 aa9.35□□□□□ -0.91
CHD6-206ENST00000470470 TRIM67Q6ZTA4 783 aa9.35□□□□□ -0.91
CHD6-206ENST00000470470 DHX57Q6P158 1386 aaKnown RBP9.35□□□□□ -0.91
CHD6-206ENST00000470470 TDRD9Q8NDG6 1382 aaKnown RBP9.35□□□□□ -0.91
CHD6-206ENST00000470470 TREML4Q6UXN2 200 aa9.33□□□□□ -0.92
CHD6-206ENST00000470470 EYA1Q99502 592 aa9.33□□□□□ -0.92
CHD6-206ENST00000470470 PCDHB3Q9Y5E6 796 aa9.33□□□□□ -0.92
CHD6-206ENST00000470470 SNAPC4Q5SXM2 1469 aa9.33□□□□□ -0.92
CHD6-206ENST00000470470 POTECB2RU33 542 aa9.32□□□□□ -0.92
CHD6-206ENST00000470470 TULP1O00294 542 aaPredicted RBP9.32□□□□□ -0.92
CHD6-206ENST00000470470 WDR62O43379 1518 aa9.32□□□□□ -0.92
CHD6-206ENST00000470470 FHOD3Q2V2M9 1422 aa9.32□□□□□ -0.92
CHD6-206ENST00000470470 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
CHD6-206ENST00000470470 ADAMTS12P58397 1594 aa9.32□□□□□ -0.92
CHD6-206ENST00000470470 IFT140Q96RY7 1462 aa9.32□□□□□ -0.92
CHD6-206ENST00000470470 DIEXFQ68CQ4 756 aaKnown RBP9.31□□□□□ -0.92
CHD6-206ENST00000470470 GRIN2BQ13224 1484 aa9.31□□□□□ -0.92
CHD6-206ENST00000470470 PHLDB1Q86UU1 1377 aa9.3□□□□□ -0.92
CHD6-206ENST00000470470 LRRIQ1Q96JM4 1722 aa9.3□□□□□ -0.92
CHD6-206ENST00000470470 SETD5Q9C0A6 1442 aa9.29□□□□□ -0.92
CHD6-206ENST00000470470 DNAJB2P25686 324 aa9.29□□□□□ -0.92
CHD6-206ENST00000470470 SLC19A1P41440 591 aa9.29□□□□□ -0.92
CHD6-206ENST00000470470 PRR20EP86478 221 aa9.29□□□□□ -0.92
CHD6-206ENST00000470470 PRR20CP86479 221 aa9.29□□□□□ -0.92
CHD6-206ENST00000470470 PRR20DP86480 221 aa9.29□□□□□ -0.92
CHD6-206ENST00000470470 PRR20BP86481 221 aa9.29□□□□□ -0.92
CHD6-206ENST00000470470 PRR20AP86496 221 aa9.29□□□□□ -0.92
CHD6-206ENST00000470470 IQGAP2Q13576 1575 aa9.28□□□□□ -0.92
CHD6-206ENST00000470470 RNF223E7ERA6 249 aa9.28□□□□□ -0.92
CHD6-206ENST00000470470 BLOC1S3Q6QNY0 202 aa9.28□□□□□ -0.92
CHD6-206ENST00000470470 UGGT2Q9NYU1 1516 aa9.28□□□□□ -0.92
CHD6-206ENST00000470470 ANKLE1Q8NAG6 615 aa9.27□□□□□ -0.93
CHD6-206ENST00000470470 CCDC18Q5T9S5 1454 aa9.26□□□□□ -0.93
CHD6-206ENST00000470470 SUPT6HQ7KZ85 1726 aaKnown RBP9.25□□□□□ -0.93
CHD6-206ENST00000470470 RAB3GAP2Q9H2M9 1393 aa9.25□□□□□ -0.93
CHD6-206ENST00000470470 ARHGEF11O15085 1522 aa9.25□□□□□ -0.93
CHD6-206ENST00000470470 EHBP1L1Q8N3D4 1523 aa9.25□□□□□ -0.93
CHD6-206ENST00000470470 KMT5BQ4FZB7 885 aa9.25□□□□□ -0.93
CHD6-206ENST00000470470 SPRYD7Q5W111 196 aa9.25□□□□□ -0.93
CHD6-206ENST00000470470 ZNF598Q86UK7 904 aaKnown RBP9.25□□□□□ -0.93
CHD6-206ENST00000470470 RBM46Q8TBY0 533 aaKnown RBP9.25□□□□□ -0.93
CHD6-206ENST00000470470 TMEM134Q9H6X4 195 aa9.25□□□□□ -0.93
CHD6-206ENST00000470470 HECW1Q76N89 1606 aa9.24□□□□□ -0.93
CHD6-206ENST00000470470 FGD6Q6ZV73 1430 aa9.24□□□□□ -0.93
CHD6-206ENST00000470470 SMYD5Q6GMV2 418 aa9.24□□□□□ -0.93
CHD6-206ENST00000470470 EMID1Q96A84 441 aaPredicted RBP9.24□□□□□ -0.93
CHD6-206ENST00000470470 TIMELESSQ9UNS1 1208 aa9.24□□□□□ -0.93
CHD6-206ENST00000470470 KIAA0586Q9BVV6 1533 aa9.24□□□□□ -0.93
CHD6-206ENST00000470470 ACTN4O43707 911 aaKnown RBP9.23□□□□□ -0.93
CHD6-206ENST00000470470 TLL1O43897 1013 aa9.23□□□□□ -0.93
CHD6-206ENST00000470470 PTGDRQ13258 359 aa9.23□□□□□ -0.93
CHD6-206ENST00000470470 MAPKBP1O60336 1514 aa9.22□□□□□ -0.93
CHD6-206ENST00000470470 STK17AQ9UEE5 414 aa9.22□□□□□ -0.93
CHD6-206ENST00000470470 MTUS2Q5JR59 1369 aa9.22□□□□□ -0.93
CHD6-206ENST00000470470 MYOM3Q5VTT5 1437 aa9.21□□□□□ -0.93
CHD6-206ENST00000470470 FAM187AA6NFU0 413 aa9.21□□□□□ -0.94
CHD6-206ENST00000470470 NCOA2Q15596 1464 aa9.21□□□□□ -0.94
CHD6-206ENST00000470470 MAGI1Q96QZ7 1491 aaPredicted RBP9.21□□□□□ -0.94
CHD6-206ENST00000470470 ZNF608Q9ULD9 1512 aaPredicted RBP9.2□□□□□ -0.94
CHD6-206ENST00000470470 EIF4G3O43432 1585 aaKnown RBP9.2□□□□□ -0.94
CHD6-206ENST00000470470 TCOF1Q13428 1488 aaKnown RBP9.2□□□□□ -0.94
CHD6-206ENST00000470470 ADGRG1Q9Y653 693 aa9.2□□□□□ -0.94
CHD6-206ENST00000470470 SEMA3EO15041 775 aa9.19□□□□□ -0.94
CHD6-206ENST00000470470 S1PR4O95977 384 aa9.19□□□□□ -0.94
CHD6-206ENST00000470470 ADH1BP00325 375 aa9.19□□□□□ -0.94
CHD6-206ENST00000470470 CFHP08603 1231 aa9.19□□□□□ -0.94
CHD6-206ENST00000470470 MLLT3P42568 568 aaPredicted RBP9.19□□□□□ -0.94
CHD6-206ENST00000470470 FAM50AQ14320 339 aaKnown RBP9.19□□□□□ -0.94
CHD6-206ENST00000470470 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
CHD6-206ENST00000470470 ATP1B4Q9UN42 357 aaPredicted RBP9.19□□□□□ -0.94
CHD6-206ENST00000470470 EPRSP07814 1512 aaKnown RBP9.19□□□□□ -0.94
CHD6-206ENST00000470470 ACIN1Q9UKV3 1341 aaKnown RBP9.19□□□□□ -0.94
CHD6-206ENST00000470470 GRIN2AQ12879 1464 aa9.18□□□□□ -0.94
CHD6-206ENST00000470470 KIAA0556O60303 1618 aa9.18□□□□□ -0.94
CHD6-206ENST00000470470 PTPN23Q9H3S7 1636 aa9.18□□□□□ -0.94
CHD6-206ENST00000470470 TPRNQ4KMQ1 711 aa9.18□□□□□ -0.94
CHD6-206ENST00000470470 AAASQ9NRG9 546 aa9.18□□□□□ -0.94
CHD6-206ENST00000470470 HFM1A2PYH4 1435 aa9.18□□□□□ -0.94
CHD6-206ENST00000470470 MIA2Q96PC5 1412 aa9.18□□□□□ -0.94
CHD6-206ENST00000470470 MAGI3Q5TCQ9 1506 aa9.17□□□□□ -0.94
CHD6-206ENST00000470470 DISP1Q96F81 1524 aa9.17□□□□□ -0.94
CHD6-206ENST00000470470 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
CHD6-206ENST00000470470 ST8SIA5O15466 376 aa9.17□□□□□ -0.94
CHD6-206ENST00000470470 GDF9O60383 454 aa9.17□□□□□ -0.94
CHD6-206ENST00000470470 NR1I2O75469 434 aa9.17□□□□□ -0.94
CHD6-206ENST00000470470 ITGAEP38570 1179 aa9.17□□□□□ -0.94
CHD6-206ENST00000470470 LIAT1Q6ZQX7 453 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms