RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 ADAMTS2O95450 1211 aa13.21□□□□□ -0.29
LSM2-210ENST00000470086 C19orf44Q9H6X5 657 aa13.21□□□□□ -0.29
LSM2-210ENST00000470086 ZRANB1Q9UGI0 708 aa13.21□□□□□ -0.29
LSM2-210ENST00000470086 ADGRL2O95490 1459 aa13.21□□□□□ -0.3
LSM2-210ENST00000470086 ATF3P18847 181 aa13.2□□□□□ -0.3
LSM2-210ENST00000470086 TBX22Q9Y458 520 aa13.2□□□□□ -0.3
LSM2-210ENST00000470086 VPS8Q8N3P4 1428 aa13.2□□□□□ -0.3
LSM2-210ENST00000470086 ABCB7O75027 752 aa13.19□□□□□ -0.3
LSM2-210ENST00000470086 PIK3R4Q99570 1358 aa13.19□□□□□ -0.3
LSM2-210ENST00000470086 C1orf167Q5SNV9 1468 aa13.18□□□□□ -0.3
LSM2-210ENST00000470086 PPP1R15AO75807 674 aaPredicted RBP13.17□□□□□ -0.3
LSM2-210ENST00000470086 NEXMIFQ5QGS0 1516 aa13.17□□□□□ -0.3
LSM2-210ENST00000470086 METP08581 1390 aa13.17□□□□□ -0.3
LSM2-210ENST00000470086 USP32Q8NFA0 1604 aa13.17□□□□□ -0.3
LSM2-210ENST00000470086 NRAPQ86VF7 1730 aa13.16□□□□□ -0.3
LSM2-210ENST00000470086 AMOTL2Q9Y2J4 779 aa13.16□□□□□ -0.3
LSM2-210ENST00000470086 CLTCL1P53675 1640 aa13.16□□□□□ -0.3
LSM2-210ENST00000470086 PXDNQ92626 1479 aa13.16□□□□□ -0.3
LSM2-210ENST00000470086 PTCH1Q13635 1447 aa13.15□□□□□ -0.3
LSM2-210ENST00000470086 DEFB132Q7Z7B7 95 aa13.15□□□□□ -0.3
LSM2-210ENST00000470086 SLC52A1Q9NWF4 448 aa13.15□□□□□ -0.3
LSM2-210ENST00000470086 CHIC2Q9UKJ5 165 aa13.15□□□□□ -0.3
LSM2-210ENST00000470086 NGLY1Q96IV0 654 aa13.14□□□□□ -0.31
LSM2-210ENST00000470086 USP21Q9UK80 565 aa13.14□□□□□ -0.31
LSM2-210ENST00000470086 RALGAPBQ86X10 1494 aa13.14□□□□□ -0.31
LSM2-210ENST00000470086 CAMTA1Q9Y6Y1 1673 aa13.14□□□□□ -0.31
LSM2-210ENST00000470086 RGPD8O14715 1765 aaPredicted RBP13.14□□□□□ -0.31
LSM2-210ENST00000470086 RGPD1P0DJD0 1748 aa13.13□□□□□ -0.31
LSM2-210ENST00000470086 BLMP54132 1417 aaPredicted RBP13.13□□□□□ -0.31
LSM2-210ENST00000470086 LRRC59Q96AG4 307 aaKnown RBP13.12□□□□□ -0.31
LSM2-210ENST00000470086 NWD2Q9ULI1 1742 aa13.12□□□□□ -0.31
LSM2-210ENST00000470086 ANKRD30AQ9BXX3 1397 aa13.11□□□□□ -0.31
LSM2-210ENST00000470086 FNBP4Q8N3X1 1017 aaPredicted RBP13.11□□□□□ -0.31
LSM2-210ENST00000470086 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
LSM2-210ENST00000470086 SLIT2O94813 1529 aa13.1□□□□□ -0.31
LSM2-210ENST00000470086 RREB1Q92766 1687 aa13.1□□□□□ -0.31
LSM2-210ENST00000470086 POLA2Q14181 598 aa13.1□□□□□ -0.31
LSM2-210ENST00000470086 TRPC5Q9UL62 973 aaPredicted RBP13.1□□□□□ -0.31
LSM2-210ENST00000470086 CDC42BPGQ6DT37 1551 aa13.1□□□□□ -0.31
LSM2-210ENST00000470086 KIF1BO60333 1816 aa13.09□□□□□ -0.31
LSM2-210ENST00000470086 PSDA5PKW4 1024 aaPredicted RBP13.09□□□□□ -0.31
LSM2-210ENST00000470086 CHGAP10645 457 aaKnown RBP13.09□□□□□ -0.31
LSM2-210ENST00000470086 NUP188Q5SRE5 1749 aa13.09□□□□□ -0.31
LSM2-210ENST00000470086 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
LSM2-210ENST00000470086 ANKRD50Q9ULJ7 1429 aa13.09□□□□□ -0.31
LSM2-210ENST00000470086 FMN2Q9NZ56 1722 aa13.08□□□□□ -0.32
LSM2-210ENST00000470086 IFT172Q9UG01 1749 aa13.08□□□□□ -0.32
LSM2-210ENST00000470086 PPLO60437 1756 aa13.08□□□□□ -0.32
LSM2-210ENST00000470086 CRYBG1Q9Y4K1 1723 aa13.07□□□□□ -0.32
LSM2-210ENST00000470086 ROBO2Q9HCK4 1378 aa13.07□□□□□ -0.32
LSM2-210ENST00000470086 UTRNP46939 3433 aa13.06□□□□□ -0.32
LSM2-210ENST00000470086 HRCP23327 699 aa13.04□□□□□ -0.32
LSM2-210ENST00000470086 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.04□□□□□ -0.32
LSM2-210ENST00000470086 THSD7AQ9UPZ6 1657 aa13.03□□□□□ -0.32
LSM2-210ENST00000470086 PRAG1Q86YV5 1406 aa13.03□□□□□ -0.32
LSM2-210ENST00000470086 KIF1AQ12756 1690 aa13.02□□□□□ -0.32
LSM2-210ENST00000470086 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.32
LSM2-210ENST00000470086 GJD4Q96KN9 370 aaPredicted RBP13.02□□□□□ -0.33
LSM2-210ENST00000470086 XPCQ01831 940 aaPredicted RBP13.01□□□□□ -0.33
LSM2-210ENST00000470086 CCDC125Q86Z20 511 aa13□□□□□ -0.33
LSM2-210ENST00000470086 TRPM3Q9HCF6 1732 aaPredicted RBP12.99□□□□□ -0.33
LSM2-210ENST00000470086 ALS2Q96Q42 1657 aa12.96□□□□□ -0.34
LSM2-210ENST00000470086 HDGFP51858 240 aaKnown RBP12.95□□□□□ -0.34
LSM2-210ENST00000470086 SEPT12Q8IYM1 358 aa12.94□□□□□ -0.34
LSM2-210ENST00000470086 CASZ1Q86V15 1759 aa12.94□□□□□ -0.34
LSM2-210ENST00000470086 R3HDM1Q15032 1099 aaKnown RBP12.93□□□□□ -0.34
LSM2-210ENST00000470086 UNC5CLQ8IV45 518 aa12.93□□□□□ -0.34
LSM2-210ENST00000470086 ZBTB12Q9Y330 459 aaPredicted RBP12.93□□□□□ -0.34
LSM2-210ENST00000470086 ADGRB2O60241 1585 aa12.93□□□□□ -0.34
LSM2-210ENST00000470086 MYOM1P52179 1685 aa12.93□□□□□ -0.34
LSM2-210ENST00000470086 DISP2A7MBM2 1401 aa12.92□□□□□ -0.34
LSM2-210ENST00000470086 NAIPQ13075 1403 aa12.92□□□□□ -0.34
LSM2-210ENST00000470086 FAM182BQ5T319 152 aa12.92□□□□□ -0.34
LSM2-210ENST00000470086 COL14A1Q05707 1796 aaKnown RBP12.92□□□□□ -0.34
LSM2-210ENST00000470086 EN1Q05925 392 aaPredicted RBP12.9□□□□□ -0.34
LSM2-210ENST00000470086 PHRF1Q9P1Y6 1649 aaKnown RBP12.9□□□□□ -0.34
LSM2-210ENST00000470086 NRKQ7Z2Y5 1582 aa12.9□□□□□ -0.35
LSM2-210ENST00000470086 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
LSM2-210ENST00000470086 HFM1A2PYH4 1435 aa12.89□□□□□ -0.35
LSM2-210ENST00000470086 YY1P25490 414 aa12.89□□□□□ -0.35
LSM2-210ENST00000470086 PLEKHH1Q9ULM0 1364 aa12.89□□□□□ -0.35
LSM2-210ENST00000470086 TNS3Q68CZ2 1445 aa12.88□□□□□ -0.35
LSM2-210ENST00000470086 NUTM2FA1L443 756 aa12.88□□□□□ -0.35
LSM2-210ENST00000470086 FOXO3O43524 673 aa12.88□□□□□ -0.35
LSM2-210ENST00000470086 NUP155O75694 1391 aa12.88□□□□□ -0.35
LSM2-210ENST00000470086 CHD4Q14839 1912 aa12.88□□□□□ -0.35
LSM2-210ENST00000470086 SBF2Q86WG5 1849 aa12.88□□□□□ -0.35
LSM2-210ENST00000470086 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
LSM2-210ENST00000470086 ESCO1Q5FWF5 840 aa12.87□□□□□ -0.35
LSM2-210ENST00000470086 KRT27Q7Z3Y8 459 aa12.87□□□□□ -0.35
LSM2-210ENST00000470086 CABLES1Q8TDN4 633 aa12.87□□□□□ -0.35
LSM2-210ENST00000470086 SPATA31A3Q5VYP0 1347 aa12.87□□□□□ -0.35
LSM2-210ENST00000470086 LOC105371045A0A1W2PR82 267 aa12.86□□□□□ -0.35
LSM2-210ENST00000470086 SF3B2Q13435 895 aaKnown RBP12.86□□□□□ -0.35
LSM2-210ENST00000470086 FAM50AQ14320 339 aaKnown RBP12.86□□□□□ -0.35
LSM2-210ENST00000470086 VPS72Q15906 364 aa12.86□□□□□ -0.35
LSM2-210ENST00000470086 ONECUT3O60422 494 aaPredicted RBP12.85□□□□□ -0.35
LSM2-210ENST00000470086 PLEKHG5O94827 1062 aa12.85□□□□□ -0.35
LSM2-210ENST00000470086 EZH2Q15910 746 aaKnown RBP12.85□□□□□ -0.35
LSM2-210ENST00000470086 CEP350Q5VT06 3117 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms