RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 C8orf34Q49A92 452 aa17.76■□□□□ 0.43
BRCA1-209ENST00000470026 WWC1Q8IX03 1113 aa17.76■□□□□ 0.43
BRCA1-209ENST00000470026 BCAR3O75815 825 aa17.75■□□□□ 0.43
BRCA1-209ENST00000470026 SIGLEC1Q9BZZ2 1709 aa17.75■□□□□ 0.43
BRCA1-209ENST00000470026 GLI2P10070 1586 aa17.75■□□□□ 0.43
BRCA1-209ENST00000470026 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
BRCA1-209ENST00000470026 ARHGEF28Q8N1W1 1705 aaKnown RBP17.74■□□□□ 0.43
BRCA1-209ENST00000470026 TRAK1Q9UPV9 953 aa17.74■□□□□ 0.43
BRCA1-209ENST00000470026 NEXMIFQ5QGS0 1516 aa17.73■□□□□ 0.43
BRCA1-209ENST00000470026 CGNL1Q0VF96 1302 aa17.73■□□□□ 0.43
BRCA1-209ENST00000470026 PPM1GO15355 546 aaPredicted RBP17.73■□□□□ 0.43
BRCA1-209ENST00000470026 SLC12A5Q9H2X9 1139 aa17.73■□□□□ 0.43
BRCA1-209ENST00000470026 MORC1Q86VD1 984 aa17.72■□□□□ 0.43
BRCA1-209ENST00000470026 RUNDC1Q96C34 613 aa17.72■□□□□ 0.43
BRCA1-209ENST00000470026 CFAP65Q6ZU64 1925 aaKnown RBP17.72■□□□□ 0.43
BRCA1-209ENST00000470026 TULP4Q9NRJ4 1543 aa17.72■□□□□ 0.43
BRCA1-209ENST00000470026 NSD2O96028 1365 aa17.71■□□□□ 0.43
BRCA1-209ENST00000470026 ARHGAP31Q2M1Z3 1444 aa17.71■□□□□ 0.43
BRCA1-209ENST00000470026 VIRMAQ69YN4 1812 aaKnown RBP17.71■□□□□ 0.43
BRCA1-209ENST00000470026 NEO1Q92859 1461 aa17.7■□□□□ 0.42
BRCA1-209ENST00000470026 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
BRCA1-209ENST00000470026 CCDC27Q2M243 656 aa17.7■□□□□ 0.42
BRCA1-209ENST00000470026 ANKRD36BQ8N2N9 1353 aa17.69■□□□□ 0.42
BRCA1-209ENST00000470026 ZFYVE9O95405 1425 aa17.69■□□□□ 0.42
BRCA1-209ENST00000470026 WDR63Q8IWG1 891 aa17.69■□□□□ 0.42
BRCA1-209ENST00000470026 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
BRCA1-209ENST00000470026 TMEM132EQ6IEE7 984 aa17.68■□□□□ 0.42
BRCA1-209ENST00000470026 GGT6Q6P531 493 aa17.68■□□□□ 0.42
BRCA1-209ENST00000470026 AAMPQ13685 434 aa17.68■□□□□ 0.42
BRCA1-209ENST00000470026 ADGRB2O60241 1585 aa17.68■□□□□ 0.42
BRCA1-209ENST00000470026 DIP2CQ9Y2E4 1556 aa17.68■□□□□ 0.42
BRCA1-209ENST00000470026 LAS1LQ9Y4W2 734 aaKnown RBP17.67■□□□□ 0.42
BRCA1-209ENST00000470026 IGHDP01880 384 aa17.66■□□□□ 0.42
BRCA1-209ENST00000470026 TCP11L2Q8N4U5 519 aa17.66■□□□□ 0.42
BRCA1-209ENST00000470026 EVC2Q86UK5 1308 aa17.66■□□□□ 0.42
BRCA1-209ENST00000470026 VGFO15240 615 aaPredicted RBP17.66■□□□□ 0.42
BRCA1-209ENST00000470026 NEFMP07197 916 aa17.66■□□□□ 0.42
BRCA1-209ENST00000470026 CLUAP1Q96AJ1 413 aa17.66■□□□□ 0.42
BRCA1-209ENST00000470026 MTHFSP49914 203 aa17.65■□□□□ 0.42
BRCA1-209ENST00000470026 RARSP54136 660 aaKnown RBP17.65■□□□□ 0.42
BRCA1-209ENST00000470026 CFAP53Q96M91 514 aa17.63■□□□□ 0.41
BRCA1-209ENST00000470026 ZMYM3Q14202 1370 aa17.63■□□□□ 0.41
BRCA1-209ENST00000470026 RGS3P49796 1198 aa17.62■□□□□ 0.41
BRCA1-209ENST00000470026 MAPK8IP3Q9UPT6 1336 aa17.62■□□□□ 0.41
BRCA1-209ENST00000470026 RICTORQ6R327 1708 aa17.62■□□□□ 0.41
BRCA1-209ENST00000470026 PANK1Q8TE04 598 aa17.62■□□□□ 0.41
BRCA1-209ENST00000470026 COG6Q9Y2V7 657 aa17.61■□□□□ 0.41
BRCA1-209ENST00000470026 ABCC11Q96J66 1382 aa17.61■□□□□ 0.41
BRCA1-209ENST00000470026 TNNT2P45379 298 aaPredicted RBP17.6■□□□□ 0.41
BRCA1-209ENST00000470026 CLTCQ00610 1675 aaKnown RBP17.6■□□□□ 0.41
BRCA1-209ENST00000470026 ANKRD26Q9UPS8 1709 aa17.59■□□□□ 0.41
BRCA1-209ENST00000470026 MED14O60244 1454 aa17.59■□□□□ 0.41
BRCA1-209ENST00000470026 RRP7AQ9Y3A4 280 aaKnown RBP17.59■□□□□ 0.41
BRCA1-209ENST00000470026 COL3A1P02461 1466 aaPredicted RBP17.59■□□□□ 0.41
BRCA1-209ENST00000470026 USP19O94966 1318 aa17.59■□□□□ 0.41
BRCA1-209ENST00000470026 OSCARQ8IYS5 282 aa17.59■□□□□ 0.41
BRCA1-209ENST00000470026 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.41
BRCA1-209ENST00000470026 SLC52A1Q9NWF4 448 aa17.58■□□□□ 0.4
BRCA1-209ENST00000470026 PTPRMP28827 1452 aa17.58■□□□□ 0.4
BRCA1-209ENST00000470026 CANXP27824 592 aaKnown RBP17.57■□□□□ 0.4
BRCA1-209ENST00000470026 IDI1Q13907 227 aa17.57■□□□□ 0.4
BRCA1-209ENST00000470026 NEUROD2Q15784 382 aa17.57■□□□□ 0.4
BRCA1-209ENST00000470026 PMFBP1Q8TBY8 1022 aa17.57■□□□□ 0.4
BRCA1-209ENST00000470026 PREX1Q8TCU6 1659 aa17.57■□□□□ 0.4
BRCA1-209ENST00000470026 A0A1W2PP64 1363 aa17.56■□□□□ 0.4
BRCA1-209ENST00000470026 CT47B1P0C2W7 299 aaPredicted RBP17.56■□□□□ 0.4
BRCA1-209ENST00000470026 MYH16Q9H6N6 1097 aa17.56■□□□□ 0.4
BRCA1-209ENST00000470026 MYO5BQ9ULV0 1848 aa17.56■□□□□ 0.4
BRCA1-209ENST00000470026 NLRP1Q9C000 1473 aa17.56■□□□□ 0.4
BRCA1-209ENST00000470026 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
BRCA1-209ENST00000470026 RLBP1P12271 317 aa17.56■□□□□ 0.4
BRCA1-209ENST00000470026 NFKBIBQ15653 356 aa17.55■□□□□ 0.4
BRCA1-209ENST00000470026 CABP2Q9NPB3 220 aa17.55■□□□□ 0.4
BRCA1-209ENST00000470026 SLC4A3P48751 1232 aa17.54■□□□□ 0.4
BRCA1-209ENST00000470026 CD163L1Q9NR16 1453 aa17.54■□□□□ 0.4
BRCA1-209ENST00000470026 FRAT1Q92837 279 aaPredicted RBP17.54■□□□□ 0.4
BRCA1-209ENST00000470026 PLEKHF1Q96S99 279 aa17.54■□□□□ 0.4
BRCA1-209ENST00000470026 PCDHB15Q9Y5E8 787 aa17.54■□□□□ 0.4
BRCA1-209ENST00000470026 ATAD2Q6PL18 1390 aa17.54■□□□□ 0.4
BRCA1-209ENST00000470026 DAXXQ9UER7 740 aaPredicted RBP17.53■□□□□ 0.4
BRCA1-209ENST00000470026 U2AF1L5P0DN76 240 aaPredicted RBP17.53■□□□□ 0.4
BRCA1-209ENST00000470026 U2AF1Q01081 240 aaKnown RBP eCLIP17.53■□□□□ 0.4
BRCA1-209ENST00000470026 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
BRCA1-209ENST00000470026 TNNQ9UQP3 1299 aa17.51■□□□□ 0.39
BRCA1-209ENST00000470026 YEATS2Q9ULM3 1422 aa17.51■□□□□ 0.39
BRCA1-209ENST00000470026 PNPLA6Q8IY17 1366 aa17.5■□□□□ 0.39
BRCA1-209ENST00000470026 YTHDC2Q9H6S0 1430 aaKnown RBP17.5■□□□□ 0.39
BRCA1-209ENST00000470026 IL16Q14005 1332 aa17.49■□□□□ 0.39
BRCA1-209ENST00000470026 MVPQ14764 893 aaKnown RBP17.49■□□□□ 0.39
BRCA1-209ENST00000470026 CDC42BPGQ6DT37 1551 aa17.49■□□□□ 0.39
BRCA1-209ENST00000470026 FYB1O15117 783 aa17.48■□□□□ 0.39
BRCA1-209ENST00000470026 SEC24BO95487 1268 aa17.48■□□□□ 0.39
BRCA1-209ENST00000470026 TRIM35Q9UPQ4 493 aa17.48■□□□□ 0.39
BRCA1-209ENST00000470026 ARHGEF40Q8TER5 1519 aa17.48■□□□□ 0.39
BRCA1-209ENST00000470026 TMPOP42166 694 aaKnown RBP17.47■□□□□ 0.39
BRCA1-209ENST00000470026 ZKSCAN2Q63HK3 967 aa17.47■□□□□ 0.39
BRCA1-209ENST00000470026 RWDD1Q9H446 243 aaPredicted RBP17.47■□□□□ 0.39
BRCA1-209ENST00000470026 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
BRCA1-209ENST00000470026 ALKQ9UM73 1620 aa17.47■□□□□ 0.39
BRCA1-209ENST00000470026 BCL2L13Q9BXK5 485 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms