RNA–Protein interactions for RNA: ENST00000469354.1

EPHA4-211, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 2,893 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-211ENST00000469354 ZMYM3Q14202 1370 aa11.54□□□□□ -0.56
EPHA4-211ENST00000469354 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
EPHA4-211ENST00000469354 CARD14Q9BXL6 1004 aa11.54□□□□□ -0.56
EPHA4-211ENST00000469354 LRPPRCP42704 1394 aaKnown RBP11.54□□□□□ -0.56
EPHA4-211ENST00000469354 PPP2R1AP30153 589 aa11.53□□□□□ -0.56
EPHA4-211ENST00000469354 ZFYVE9O95405 1425 aa11.53□□□□□ -0.56
EPHA4-211ENST00000469354 MYOM1P52179 1685 aa11.52□□□□□ -0.56
EPHA4-211ENST00000469354 POGKQ9P215 609 aa11.52□□□□□ -0.57
EPHA4-211ENST00000469354 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.57
EPHA4-211ENST00000469354 QRICH2Q9H0J4 1663 aa11.52□□□□□ -0.57
EPHA4-211ENST00000469354 EVC2Q86UK5 1308 aa11.52□□□□□ -0.57
EPHA4-211ENST00000469354 MYO3AQ8NEV4 1616 aa11.52□□□□□ -0.57
EPHA4-211ENST00000469354 CABP2Q9NPB3 220 aa11.52□□□□□ -0.57
EPHA4-211ENST00000469354 PRAM1Q96QH2 718 aa11.51□□□□□ -0.57
EPHA4-211ENST00000469354 MINK1Q8N4C8 1332 aaPredicted RBP11.51□□□□□ -0.57
EPHA4-211ENST00000469354 SRPK2P78362 688 aaKnown RBP11.5□□□□□ -0.57
EPHA4-211ENST00000469354 A2ML1A8K2U0 1454 aa11.5□□□□□ -0.57
EPHA4-211ENST00000469354 SPATA31D1Q6ZQQ2 1576 aa11.5□□□□□ -0.57
EPHA4-211ENST00000469354 RIMS2Q9UQ26 1411 aa11.5□□□□□ -0.57
EPHA4-211ENST00000469354 TNNT2P45379 298 aaPredicted RBP11.49□□□□□ -0.57
EPHA4-211ENST00000469354 WDR43Q15061 677 aaKnown RBP eCLIP11.49□□□□□ -0.57
EPHA4-211ENST00000469354 CEBPAP49715 358 aaPredicted RBP11.49□□□□□ -0.57
EPHA4-211ENST00000469354 ADAMTS8Q9UP79 889 aa11.49□□□□□ -0.57
EPHA4-211ENST00000469354 NUDCQ9Y266 331 aa11.49□□□□□ -0.57
EPHA4-211ENST00000469354 YTHDC2Q9H6S0 1430 aaKnown RBP11.48□□□□□ -0.57
EPHA4-211ENST00000469354 NSD3Q9BZ95 1437 aa11.48□□□□□ -0.57
EPHA4-211ENST00000469354 ARHGEF28Q8N1W1 1705 aaKnown RBP11.48□□□□□ -0.57
EPHA4-211ENST00000469354 TNRQ92752 1358 aa11.47□□□□□ -0.57
EPHA4-211ENST00000469354 NPC1L1Q9UHC9 1359 aa11.47□□□□□ -0.57
EPHA4-211ENST00000469354 SMG6Q86US8 1419 aaKnown RBP11.47□□□□□ -0.57
EPHA4-211ENST00000469354 ALKQ9UM73 1620 aa11.47□□□□□ -0.57
EPHA4-211ENST00000469354 MORC1Q86VD1 984 aa11.46□□□□□ -0.57
EPHA4-211ENST00000469354 WAPLQ7Z5K2 1190 aa11.46□□□□□ -0.57
EPHA4-211ENST00000469354 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.46□□□□□ -0.58
EPHA4-211ENST00000469354 TULP4Q9NRJ4 1543 aa11.45□□□□□ -0.58
EPHA4-211ENST00000469354 HDGFP51858 240 aaKnown RBP11.44□□□□□ -0.58
EPHA4-211ENST00000469354 PTPRMP28827 1452 aa11.44□□□□□ -0.58
EPHA4-211ENST00000469354 IGSF3O75054 1194 aa11.44□□□□□ -0.58
EPHA4-211ENST00000469354 PUS7Q96PZ0 661 aaKnown RBP11.44□□□□□ -0.58
EPHA4-211ENST00000469354 CGNL1Q0VF96 1302 aa11.44□□□□□ -0.58
EPHA4-211ENST00000469354 CDK19Q9BWU1 502 aa11.43□□□□□ -0.58
EPHA4-211ENST00000469354 CDCA7LQ96GN5 454 aa11.43□□□□□ -0.58
EPHA4-211ENST00000469354 CCDC146Q8IYE0 955 aa11.42□□□□□ -0.58
EPHA4-211ENST00000469354 CFAP44Q96MT7 982 aa11.42□□□□□ -0.58
EPHA4-211ENST00000469354 TXNDC2Q86VQ3 553 aa11.42□□□□□ -0.58
EPHA4-211ENST00000469354 DNAJC5Q9H3Z4 198 aa11.42□□□□□ -0.58
EPHA4-211ENST00000469354 BLMP54132 1417 aaPredicted RBP11.42□□□□□ -0.58
EPHA4-211ENST00000469354 ANKRD36BQ8N2N9 1353 aa11.42□□□□□ -0.58
EPHA4-211ENST00000469354 METP08581 1390 aa11.41□□□□□ -0.58
EPHA4-211ENST00000469354 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
EPHA4-211ENST00000469354 ATAD2Q6PL18 1390 aa11.4□□□□□ -0.58
EPHA4-211ENST00000469354 TMEM2Q9UHN6 1383 aa11.4□□□□□ -0.58
EPHA4-211ENST00000469354 PDE3BQ13370 1112 aa11.4□□□□□ -0.58
EPHA4-211ENST00000469354 TERF2IPQ9NYB0 399 aa11.4□□□□□ -0.58
EPHA4-211ENST00000469354 CABP1Q9NZU7 370 aa11.4□□□□□ -0.58
EPHA4-211ENST00000469354 A0A1W2PP64 1363 aa11.4□□□□□ -0.59
EPHA4-211ENST00000469354 BCL11BQ9C0K0 894 aaPredicted RBP11.39□□□□□ -0.59
EPHA4-211ENST00000469354 LTKP29376 864 aa11.39□□□□□ -0.59
EPHA4-211ENST00000469354 GGNBP2Q9H3C7 697 aa11.39□□□□□ -0.59
EPHA4-211ENST00000469354 MTHFSP49914 203 aa11.38□□□□□ -0.59
EPHA4-211ENST00000469354 INSRP06213 1382 aa11.38□□□□□ -0.59
EPHA4-211ENST00000469354 ABCC11Q96J66 1382 aa11.38□□□□□ -0.59
EPHA4-211ENST00000469354 HDGFL2Q7Z4V5 671 aaPredicted RBP11.38□□□□□ -0.59
EPHA4-211ENST00000469354 PKNOX2Q96KN3 472 aa11.38□□□□□ -0.59
EPHA4-211ENST00000469354 SLC26A8Q96RN1 970 aa11.38□□□□□ -0.59
EPHA4-211ENST00000469354 PPP4R2Q9NY27 417 aa11.38□□□□□ -0.59
EPHA4-211ENST00000469354 APAF1O14727 1248 aa11.37□□□□□ -0.59
EPHA4-211ENST00000469354 ERICH6BQ5W0A0 696 aa11.37□□□□□ -0.59
EPHA4-211ENST00000469354 RCAN3Q9UKA8 241 aa11.37□□□□□ -0.59
EPHA4-211ENST00000469354 EID1Q9Y6B2 187 aa11.37□□□□□ -0.59
EPHA4-211ENST00000469354 NINLQ9Y2I6 1382 aa11.37□□□□□ -0.59
EPHA4-211ENST00000469354 B4GALNT3Q6L9W6 998 aa11.36□□□□□ -0.59
EPHA4-211ENST00000469354 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.36□□□□□ -0.59
EPHA4-211ENST00000469354 UBR1Q8IWV7 1749 aa11.35□□□□□ -0.59
EPHA4-211ENST00000469354 POLR3AO14802 1390 aaPredicted RBP11.35□□□□□ -0.59
EPHA4-211ENST00000469354 NRXN3Q9Y4C0 1643 aa11.35□□□□□ -0.59
EPHA4-211ENST00000469354 CFAP53Q96M91 514 aa11.35□□□□□ -0.59
EPHA4-211ENST00000469354 WASLO00401 505 aaPredicted RBP11.35□□□□□ -0.59
EPHA4-211ENST00000469354 FYB1O15117 783 aa11.35□□□□□ -0.59
EPHA4-211ENST00000469354 CDK11BP21127 795 aaKnown RBP11.35□□□□□ -0.59
EPHA4-211ENST00000469354 SETD1AO15047 1707 aaKnown RBP11.34□□□□□ -0.59
EPHA4-211ENST00000469354 NLRP1Q9C000 1473 aa11.34□□□□□ -0.59
EPHA4-211ENST00000469354 RNF123Q5XPI4 1314 aa11.34□□□□□ -0.59
EPHA4-211ENST00000469354 DLC1Q96QB1 1528 aa11.34□□□□□ -0.59
EPHA4-211ENST00000469354 NSD2O96028 1365 aa11.34□□□□□ -0.59
EPHA4-211ENST00000469354 NEUROD2Q15784 382 aa11.34□□□□□ -0.59
EPHA4-211ENST00000469354 NCKAP5LQ9HCH0 1330 aa11.33□□□□□ -0.6
EPHA4-211ENST00000469354 GOLGA2Q08379 1002 aa11.33□□□□□ -0.6
EPHA4-211ENST00000469354 C3P01024 1663 aa11.33□□□□□ -0.6
EPHA4-211ENST00000469354 FER1L4A9Z1Z3 1794 aa11.33□□□□□ -0.6
EPHA4-211ENST00000469354 NUTM2FA1L443 756 aa11.33□□□□□ -0.6
EPHA4-211ENST00000469354 THEMISQ8N1K5 641 aaPredicted RBP11.33□□□□□ -0.6
EPHA4-211ENST00000469354 CD163L1Q9NR16 1453 aa11.32□□□□□ -0.6
EPHA4-211ENST00000469354 RRP1P56182 461 aaKnown RBP11.32□□□□□ -0.6
EPHA4-211ENST00000469354 NUDT16Q96DE0 195 aaKnown RBP11.32□□□□□ -0.6
EPHA4-211ENST00000469354 USP32Q8NFA0 1604 aa11.32□□□□□ -0.6
EPHA4-211ENST00000469354 TSHZ2Q9NRE2 1034 aa11.32□□□□□ -0.6
EPHA4-211ENST00000469354 ADAMTS13Q76LX8 1427 aa11.32□□□□□ -0.6
EPHA4-211ENST00000469354 U2AF1L5P0DN76 240 aaPredicted RBP11.31□□□□□ -0.6
EPHA4-211ENST00000469354 U2AF1Q01081 240 aaKnown RBP eCLIP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms