RNA–Protein interactions for RNA: ENST00000468658.1

CACNA2D3-203, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 3, humanhuman

TSL 1 (best)

Gene CACNA2D3, Length 1,826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D3-203ENST00000468658 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.63□□□□□ -1.03
CACNA2D3-203ENST00000468658 MAPK8IP3Q9UPT6 1336 aa8.63□□□□□ -1.03
CACNA2D3-203ENST00000468658 FRAT2O75474 233 aaPredicted RBP8.63□□□□□ -1.03
CACNA2D3-203ENST00000468658 HNRNPMP52272 730 aaKnown RBP eCLIP8.63□□□□□ -1.03
CACNA2D3-203ENST00000468658 WDR43Q15061 677 aaKnown RBP eCLIP8.63□□□□□ -1.03
CACNA2D3-203ENST00000468658 CDCA8Q53HL2 280 aa8.63□□□□□ -1.03
CACNA2D3-203ENST00000468658 SHPRHQ149N8 1683 aa8.63□□□□□ -1.03
CACNA2D3-203ENST00000468658 CGNL1Q0VF96 1302 aa8.63□□□□□ -1.03
CACNA2D3-203ENST00000468658 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
CACNA2D3-203ENST00000468658 PDE3AQ14432 1141 aa8.62□□□□□ -1.03
CACNA2D3-203ENST00000468658 HS6ST3Q8IZP7 471 aa8.62□□□□□ -1.03
CACNA2D3-203ENST00000468658 TET3O43151 1660 aa8.62□□□□□ -1.03
CACNA2D3-203ENST00000468658 PTPRTO14522 1441 aa8.62□□□□□ -1.03
CACNA2D3-203ENST00000468658 IFT172Q9UG01 1749 aa8.62□□□□□ -1.03
CACNA2D3-203ENST00000468658 USP32Q8NFA0 1604 aa8.62□□□□□ -1.03
CACNA2D3-203ENST00000468658 ARHGAP5Q13017 1502 aa8.62□□□□□ -1.03
CACNA2D3-203ENST00000468658 SLC4A3P48751 1232 aa8.61□□□□□ -1.03
CACNA2D3-203ENST00000468658 CLTCL1P53675 1640 aa8.61□□□□□ -1.03
CACNA2D3-203ENST00000468658 E9PSI1 815 aa8.61□□□□□ -1.03
CACNA2D3-203ENST00000468658 KNSTRNQ9Y448 316 aa8.61□□□□□ -1.03
CACNA2D3-203ENST00000468658 VWDEQ8N2E2 1590 aa8.6□□□□□ -1.03
CACNA2D3-203ENST00000468658 MYOM2P54296 1465 aa8.6□□□□□ -1.03
CACNA2D3-203ENST00000468658 ABCC1P33527 1531 aa8.6□□□□□ -1.03
CACNA2D3-203ENST00000468658 ZC3H13Q5T200 1668 aaKnown RBP8.59□□□□□ -1.03
CACNA2D3-203ENST00000468658 IQSEC2Q5JU85 1478 aa8.59□□□□□ -1.03
CACNA2D3-203ENST00000468658 FAM69CQ0P6D2 419 aa8.59□□□□□ -1.03
CACNA2D3-203ENST00000468658 BECN1Q14457 450 aa8.59□□□□□ -1.03
CACNA2D3-203ENST00000468658 L1TD1Q5T7N2 865 aaKnown RBP8.59□□□□□ -1.03
CACNA2D3-203ENST00000468658 ANTXR1Q9H6X2 564 aa8.59□□□□□ -1.03
CACNA2D3-203ENST00000468658 MAP3K4Q9Y6R4 1608 aa8.58□□□□□ -1.04
CACNA2D3-203ENST00000468658 POLR3AO14802 1390 aaPredicted RBP8.58□□□□□ -1.04
CACNA2D3-203ENST00000468658 ARAP3Q8WWN8 1544 aa8.58□□□□□ -1.04
CACNA2D3-203ENST00000468658 ABCA6Q8N139 1617 aa8.58□□□□□ -1.04
CACNA2D3-203ENST00000468658 KANK1Q14678 1352 aa8.58□□□□□ -1.04
CACNA2D3-203ENST00000468658 SBNO2Q9Y2G9 1366 aa8.58□□□□□ -1.04
CACNA2D3-203ENST00000468658 ERVK-7P63135 1459 aa8.58□□□□□ -1.04
CACNA2D3-203ENST00000468658 RGL3Q3MIN7 710 aa8.57□□□□□ -1.04
CACNA2D3-203ENST00000468658 INO80Q9ULG1 1556 aaPredicted RBP8.57□□□□□ -1.04
CACNA2D3-203ENST00000468658 IGHDP01880 384 aa8.57□□□□□ -1.04
CACNA2D3-203ENST00000468658 RGS3P49796 1198 aa8.57□□□□□ -1.04
CACNA2D3-203ENST00000468658 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
CACNA2D3-203ENST00000468658 RTEL1-TNFRSF6BF6WH68 1400 aa8.56□□□□□ -1.04
CACNA2D3-203ENST00000468658 SPINK5Q9NQ38 1064 aaPredicted RBP8.56□□□□□ -1.04
CACNA2D3-203ENST00000468658 SETBP1Q9Y6X0 1596 aa8.56□□□□□ -1.04
CACNA2D3-203ENST00000468658 ADGRB2O60241 1585 aa8.55□□□□□ -1.04
CACNA2D3-203ENST00000468658 NKX1-1Q15270 411 aaPredicted RBP8.55□□□□□ -1.04
CACNA2D3-203ENST00000468658 ZFYVE16Q7Z3T8 1539 aa8.55□□□□□ -1.04
CACNA2D3-203ENST00000468658 PMFBP1Q8TBY8 1022 aa8.55□□□□□ -1.04
CACNA2D3-203ENST00000468658 TBC1D32Q96NH3 1257 aa8.55□□□□□ -1.04
CACNA2D3-203ENST00000468658 NRXN1Q9ULB1 1477 aa8.55□□□□□ -1.04
CACNA2D3-203ENST00000468658 KIF1BO60333 1816 aa8.55□□□□□ -1.04
CACNA2D3-203ENST00000468658 ADGRL1O94910 1474 aa8.55□□□□□ -1.04
CACNA2D3-203ENST00000468658 CENPJQ9HC77 1338 aaPredicted RBP8.54□□□□□ -1.04
CACNA2D3-203ENST00000468658 FSD2A1L4K1 749 aa8.54□□□□□ -1.04
CACNA2D3-203ENST00000468658 POGKQ9P215 609 aa8.54□□□□□ -1.04
CACNA2D3-203ENST00000468658 PLCH2O75038 1416 aa8.54□□□□□ -1.04
CACNA2D3-203ENST00000468658 APAF1O14727 1248 aa8.54□□□□□ -1.04
CACNA2D3-203ENST00000468658 GTPBP6O43824 516 aaPredicted RBP8.54□□□□□ -1.04
CACNA2D3-203ENST00000468658 BCAR3O75815 825 aa8.54□□□□□ -1.04
CACNA2D3-203ENST00000468658 CIZ1Q9ULV3 898 aaPredicted RBP8.54□□□□□ -1.04
CACNA2D3-203ENST00000468658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.53□□□□□ -1.04
CACNA2D3-203ENST00000468658 UHRF1BP1LA0JNW5 1464 aa8.53□□□□□ -1.04
CACNA2D3-203ENST00000468658 SEC24BO95487 1268 aa8.52□□□□□ -1.04
CACNA2D3-203ENST00000468658 LMOD2Q6P5Q4 547 aa8.52□□□□□ -1.04
CACNA2D3-203ENST00000468658 PLCD3Q8N3E9 789 aa8.52□□□□□ -1.04
CACNA2D3-203ENST00000468658 NCOA3Q9Y6Q9 1424 aa8.52□□□□□ -1.05
CACNA2D3-203ENST00000468658 MROH1Q8NDA8 1641 aa8.52□□□□□ -1.05
CACNA2D3-203ENST00000468658 DCAF8L1A6NGE4 600 aa8.52□□□□□ -1.05
CACNA2D3-203ENST00000468658 CCDC27Q2M243 656 aa8.52□□□□□ -1.05
CACNA2D3-203ENST00000468658 RRAGDQ9NQL2 400 aaPredicted RBP8.52□□□□□ -1.05
CACNA2D3-203ENST00000468658 ISY1Q9ULR0 285 aaKnown RBP8.52□□□□□ -1.05
CACNA2D3-203ENST00000468658 MROH2AA6NES4 1674 aa8.51□□□□□ -1.05
CACNA2D3-203ENST00000468658 WDR63Q8IWG1 891 aa8.51□□□□□ -1.05
CACNA2D3-203ENST00000468658 WWC1Q8IX03 1113 aa8.51□□□□□ -1.05
CACNA2D3-203ENST00000468658 CCDC146Q8IYE0 955 aa8.51□□□□□ -1.05
CACNA2D3-203ENST00000468658 UPF2Q9HAU5 1272 aaKnown RBP8.51□□□□□ -1.05
CACNA2D3-203ENST00000468658 ZCCHC11Q5TAX3 1644 aaKnown RBP8.51□□□□□ -1.05
CACNA2D3-203ENST00000468658 QRICH2Q9H0J4 1663 aa8.5□□□□□ -1.05
CACNA2D3-203ENST00000468658 CLCN1P35523 988 aa8.5□□□□□ -1.05
CACNA2D3-203ENST00000468658 RARSP54136 660 aaKnown RBP8.5□□□□□ -1.05
CACNA2D3-203ENST00000468658 TBC1D2Q9BYX2 928 aa8.5□□□□□ -1.05
CACNA2D3-203ENST00000468658 STAG3Q9UJ98 1225 aa8.5□□□□□ -1.05
CACNA2D3-203ENST00000468658 PPRC1Q5VV67 1664 aaKnown RBP8.5□□□□□ -1.05
CACNA2D3-203ENST00000468658 ZNF518AQ6AHZ1 1483 aa8.5□□□□□ -1.05
CACNA2D3-203ENST00000468658 LMTK2Q8IWU2 1503 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 ASXL2Q76L83 1435 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 TRAPPC8Q9Y2L5 1435 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 MCM4P33991 863 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 PDZRN3Q9UPQ7 1066 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 COG6Q9Y2V7 657 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 ADGRB3O60242 1522 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 EFCAB6Q5THR3 1501 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 PPLO60437 1756 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 ABCA9Q8IUA7 1624 aa8.49□□□□□ -1.05
CACNA2D3-203ENST00000468658 GOLGA6L3A6NEY3 463 aa8.48□□□□□ -1.05
CACNA2D3-203ENST00000468658 CT47B1P0C2W7 299 aaPredicted RBP8.48□□□□□ -1.05
CACNA2D3-203ENST00000468658 XRCC6P12956 609 aaKnown RBP eCLIP8.48□□□□□ -1.05
CACNA2D3-203ENST00000468658 PANK1Q8TE04 598 aa8.48□□□□□ -1.05
CACNA2D3-203ENST00000468658 RUNDC1Q96C34 613 aa8.48□□□□□ -1.05
CACNA2D3-203ENST00000468658 CARD14Q9BXL6 1004 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms