RNA–Protein interactions for RNA: ENST00000468469.5

COMMD3-207, Transcript of COMM domain containing 3, humanhuman

TSL 3

Gene COMMD3, Length 526 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-207ENST00000468469 DCAF11Q8TEB1 546 aa5.25□□□□□ -1.57
COMMD3-207ENST00000468469 MSH6P52701 1360 aa5.25□□□□□ -1.57
COMMD3-207ENST00000468469 TONSLQ96HA7 1378 aa5.25□□□□□ -1.57
COMMD3-207ENST00000468469 NALCNQ8IZF0 1738 aa5.25□□□□□ -1.57
COMMD3-207ENST00000468469 XIRP1Q702N8 1843 aaKnown RBP5.25□□□□□ -1.57
COMMD3-207ENST00000468469 NEUROD1Q13562 356 aa5.24□□□□□ -1.57
COMMD3-207ENST00000468469 PROSER2Q86WR7 435 aaPredicted RBP5.24□□□□□ -1.57
COMMD3-207ENST00000468469 FBXO41Q8TF61 875 aa5.24□□□□□ -1.57
COMMD3-207ENST00000468469 STAC3Q96MF2 364 aa5.24□□□□□ -1.57
COMMD3-207ENST00000468469 SIN3AQ96ST3 1273 aa5.24□□□□□ -1.57
COMMD3-207ENST00000468469 KDM2AQ9Y2K7 1162 aa5.24□□□□□ -1.57
COMMD3-207ENST00000468469 LRPPRCP42704 1394 aaKnown RBP5.24□□□□□ -1.57
COMMD3-207ENST00000468469 CDC42BPGQ6DT37 1551 aa5.24□□□□□ -1.57
COMMD3-207ENST00000468469 DCCP43146 1447 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 YTHDC2Q9H6S0 1430 aaKnown RBP5.23□□□□□ -1.57
COMMD3-207ENST00000468469 ADGRL3Q9HAR2 1447 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 NCOA3Q9Y6Q9 1424 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 DLC1Q96QB1 1528 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 KIAA1210Q9ULL0 1709 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 CFAP70Q5T0N1 1121 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 C14orf37Q86TY3 774 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 RBM33Q96EV2 1170 aaKnown RBP5.23□□□□□ -1.57
COMMD3-207ENST00000468469 C14orf93Q9H972 538 aaKnown RBP5.23□□□□□ -1.57
COMMD3-207ENST00000468469 AMOTL2Q9Y2J4 779 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 ROBO2Q9HCK4 1378 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 TRPM1Q7Z4N2 1603 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 CLSPNQ9HAW4 1339 aa5.23□□□□□ -1.57
COMMD3-207ENST00000468469 UBAP1LF5GYI3 381 aa5.22□□□□□ -1.57
COMMD3-207ENST00000468469 L3MBTL2Q969R5 705 aa5.22□□□□□ -1.57
COMMD3-207ENST00000468469 ARHGEF28Q8N1W1 1705 aaKnown RBP5.22□□□□□ -1.57
COMMD3-207ENST00000468469 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.22□□□□□ -1.57
COMMD3-207ENST00000468469 FAM135BQ49AJ0 1406 aa5.22□□□□□ -1.57
COMMD3-207ENST00000468469 ADGRB2O60241 1585 aa5.21□□□□□ -1.57
COMMD3-207ENST00000468469 RALGAPBQ86X10 1494 aa5.21□□□□□ -1.58
COMMD3-207ENST00000468469 ABCC11Q96J66 1382 aa5.21□□□□□ -1.58
COMMD3-207ENST00000468469 TOM1O60784 492 aa5.21□□□□□ -1.58
COMMD3-207ENST00000468469 POTEIP0CG38 1075 aa5.21□□□□□ -1.58
COMMD3-207ENST00000468469 TMEM132EQ6IEE7 984 aa5.21□□□□□ -1.58
COMMD3-207ENST00000468469 CCER1Q8TC90 406 aaPredicted RBP5.21□□□□□ -1.58
COMMD3-207ENST00000468469 STK26Q9P289 416 aa5.21□□□□□ -1.58
COMMD3-207ENST00000468469 ROBO1Q9Y6N7 1651 aa5.21□□□□□ -1.58
COMMD3-207ENST00000468469 ROCK2O75116 1388 aaKnown RBP5.2□□□□□ -1.58
COMMD3-207ENST00000468469 PLEKHH1Q9ULM0 1364 aa5.2□□□□□ -1.58
COMMD3-207ENST00000468469 PIP4K2BP78356 416 aa5.2□□□□□ -1.58
COMMD3-207ENST00000468469 ILDR1Q86SU0 546 aaPredicted RBP5.2□□□□□ -1.58
COMMD3-207ENST00000468469 CADPS2Q86UW7 1296 aa5.2□□□□□ -1.58
COMMD3-207ENST00000468469 CLEC11AQ9Y240 323 aa5.2□□□□□ -1.58
COMMD3-207ENST00000468469 MST1RQ04912 1400 aa5.2□□□□□ -1.58
COMMD3-207ENST00000468469 EIF3AQ14152 1382 aaKnown RBP5.19□□□□□ -1.58
COMMD3-207ENST00000468469 ATF3P18847 181 aa5.19□□□□□ -1.58
COMMD3-207ENST00000468469 PRAM1Q96QH2 718 aa5.19□□□□□ -1.58
COMMD3-207ENST00000468469 C19orf44Q9H6X5 657 aa5.19□□□□□ -1.58
COMMD3-207ENST00000468469 FMN2Q9NZ56 1722 aa5.19□□□□□ -1.58
COMMD3-207ENST00000468469 C1orf167Q5SNV9 1468 aa5.19□□□□□ -1.58
COMMD3-207ENST00000468469 AHDC1Q5TGY3 1603 aaPredicted RBP5.19□□□□□ -1.58
COMMD3-207ENST00000468469 QRICH2Q9H0J4 1663 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 TULP4Q9NRJ4 1543 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 GPRASP1Q5JY77 1395 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 SPDYE2BA6NHP3 402 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 SPDYE6P0CI01 402 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 SAFB2Q14151 953 aaKnown RBP eCLIP5.18□□□□□ -1.58
COMMD3-207ENST00000468469 SPDYE2Q495Y8 402 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 WAPLQ7Z5K2 1190 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 POGKQ9P215 609 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 TRAK1Q9UPV9 953 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 KIF1AQ12756 1690 aa5.18□□□□□ -1.58
COMMD3-207ENST00000468469 ANKARQ7Z5J8 1434 aa5.17□□□□□ -1.58
COMMD3-207ENST00000468469 COL16A1Q07092 1604 aaPredicted RBP5.17□□□□□ -1.58
COMMD3-207ENST00000468469 NHSL1Q5SYE7 1610 aa5.17□□□□□ -1.58
COMMD3-207ENST00000468469 NBPF1Q3BBV0 1214 aa5.17□□□□□ -1.58
COMMD3-207ENST00000468469 NBPF8Q3BBV2 869 aa5.17□□□□□ -1.58
COMMD3-207ENST00000468469 SPDYE1Q8NFV5 336 aaPredicted RBP5.17□□□□□ -1.58
COMMD3-207ENST00000468469 SIRT1Q96EB6 747 aa5.17□□□□□ -1.58
COMMD3-207ENST00000468469 SLAIN2Q9P270 581 aa5.17□□□□□ -1.58
COMMD3-207ENST00000468469 MINK1Q8N4C8 1332 aaPredicted RBP5.17□□□□□ -1.58
COMMD3-207ENST00000468469 PHLPP1O60346 1717 aa5.17□□□□□ -1.58
COMMD3-207ENST00000468469 USP32Q8NFA0 1604 aa5.16□□□□□ -1.58
COMMD3-207ENST00000468469 TOPAZ1Q8N9V7 1692 aa5.16□□□□□ -1.58
COMMD3-207ENST00000468469 ATP7BP35670 1465 aa5.16□□□□□ -1.58
COMMD3-207ENST00000468469 CHADLQ6NUI6 762 aa5.16□□□□□ -1.58
COMMD3-207ENST00000468469 BRINP3Q76B58 766 aa5.16□□□□□ -1.58
COMMD3-207ENST00000468469 HIRIP3Q9BW71 556 aaPredicted RBP5.16□□□□□ -1.58
COMMD3-207ENST00000468469 CARD11Q9BXL7 1154 aa5.16□□□□□ -1.58
COMMD3-207ENST00000468469 TIMELESSQ9UNS1 1208 aa5.16□□□□□ -1.58
COMMD3-207ENST00000468469 CENPJQ9HC77 1338 aaPredicted RBP5.16□□□□□ -1.58
COMMD3-207ENST00000468469 ITSN1Q15811 1721 aa5.15□□□□□ -1.58
COMMD3-207ENST00000468469 HSPA1LP34931 641 aa5.15□□□□□ -1.59
COMMD3-207ENST00000468469 USP47Q96K76 1375 aa5.15□□□□□ -1.59
COMMD3-207ENST00000468469 PXDNQ92626 1479 aa5.14□□□□□ -1.59
COMMD3-207ENST00000468469 MED1Q15648 1581 aaPredicted RBP5.14□□□□□ -1.59
COMMD3-207ENST00000468469 NUTM2FA1L443 756 aa5.14□□□□□ -1.59
COMMD3-207ENST00000468469 ESCO1Q5FWF5 840 aa5.14□□□□□ -1.59
COMMD3-207ENST00000468469 SHPRHQ149N8 1683 aa5.14□□□□□ -1.59
COMMD3-207ENST00000468469 SBNO2Q9Y2G9 1366 aa5.14□□□□□ -1.59
COMMD3-207ENST00000468469 WASLO00401 505 aaPredicted RBP5.13□□□□□ -1.59
COMMD3-207ENST00000468469 ORAI2Q96SN7 254 aa5.13□□□□□ -1.59
COMMD3-207ENST00000468469 FOXD4L1Q9NU39 408 aa5.13□□□□□ -1.59
COMMD3-207ENST00000468469 NPHP3Q7Z494 1330 aa5.13□□□□□ -1.59
COMMD3-207ENST00000468469 PRR36Q9H6K5 1346 aa5.13□□□□□ -1.59
COMMD3-207ENST00000468469 JCADQ9P266 1359 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms