RNA–Protein interactions for RNA: ENST00000467869.5

ELL3-203, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 1,769 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-203ENST00000467869 CDCA8Q53HL2 280 aa22.66■■□□□ 1.22
ELL3-203ENST00000467869 PRAM1Q96QH2 718 aa22.66■■□□□ 1.22
ELL3-203ENST00000467869 TECPR2O15040 1411 aa22.66■■□□□ 1.22
ELL3-203ENST00000467869 CPS1P31327 1500 aa22.66■■□□□ 1.22
ELL3-203ENST00000467869 HSPA2P54652 639 aa22.64■■□□□ 1.22
ELL3-203ENST00000467869 SAFB2Q14151 953 aaKnown RBP eCLIP22.64■■□□□ 1.22
ELL3-203ENST00000467869 PIK3R4Q99570 1358 aa22.64■■□□□ 1.21
ELL3-203ENST00000467869 FAM135BQ49AJ0 1406 aa22.62■■□□□ 1.21
ELL3-203ENST00000467869 PTPRUQ92729 1446 aa22.62■■□□□ 1.21
ELL3-203ENST00000467869 SIRT1Q96EB6 747 aa22.61■■□□□ 1.21
ELL3-203ENST00000467869 ERICH6BQ5W0A0 696 aa22.6■■□□□ 1.21
ELL3-203ENST00000467869 AMOTL2Q9Y2J4 779 aa22.6■■□□□ 1.21
ELL3-203ENST00000467869 XRN1Q8IZH2 1706 aaKnown RBP22.59■■□□□ 1.21
ELL3-203ENST00000467869 EVC2Q86UK5 1308 aa22.59■■□□□ 1.21
ELL3-203ENST00000467869 PTCH1Q13635 1447 aa22.58■■□□□ 1.21
ELL3-203ENST00000467869 WAPLQ7Z5K2 1190 aa22.58■■□□□ 1.21
ELL3-203ENST00000467869 MINK1Q8N4C8 1332 aaPredicted RBP22.58■■□□□ 1.21
ELL3-203ENST00000467869 ROBO2Q9HCK4 1378 aa22.58■■□□□ 1.21
ELL3-203ENST00000467869 PLEKHH1Q9ULM0 1364 aa22.58■■□□□ 1.21
ELL3-203ENST00000467869 TULP4Q9NRJ4 1543 aa22.56■■□□□ 1.2
ELL3-203ENST00000467869 MSH5O43196 834 aa22.55■■□□□ 1.2
ELL3-203ENST00000467869 CHD2O14647 1828 aaKnown RBP22.55■■□□□ 1.2
ELL3-203ENST00000467869 ANP32CO43423 234 aa22.53■■□□□ 1.2
ELL3-203ENST00000467869 KCNA6P17658 529 aa22.52■■□□□ 1.2
ELL3-203ENST00000467869 SRPK2P78362 688 aaKnown RBP22.5■■□□□ 1.19
ELL3-203ENST00000467869 PUS7Q96PZ0 661 aaKnown RBP22.5■■□□□ 1.19
ELL3-203ENST00000467869 STRCQ7RTU9 1775 aa22.5■■□□□ 1.19
ELL3-203ENST00000467869 NWD1Q149M9 1564 aa22.49■■□□□ 1.19
ELL3-203ENST00000467869 MYOM1P52179 1685 aa22.49■■□□□ 1.19
ELL3-203ENST00000467869 CABP2Q9NPB3 220 aa22.48■■□□□ 1.19
ELL3-203ENST00000467869 ADGRB2O60241 1585 aa22.47■■□□□ 1.19
ELL3-203ENST00000467869 CDK19Q9BWU1 502 aa22.47■■□□□ 1.19
ELL3-203ENST00000467869 ATAD2Q6PL18 1390 aa22.46■■□□□ 1.19
ELL3-203ENST00000467869 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.46■■□□□ 1.19
ELL3-203ENST00000467869 WASLO00401 505 aaPredicted RBP22.44■■□□□ 1.18
ELL3-203ENST00000467869 ERICH6Q7L0X2 663 aa22.44■■□□□ 1.18
ELL3-203ENST00000467869 TMC1Q8TDI8 760 aa22.44■■□□□ 1.18
ELL3-203ENST00000467869 PANK3Q9H999 370 aa22.43■■□□□ 1.18
ELL3-203ENST00000467869 NKTRP30414 1462 aaKnown RBP22.43■■□□□ 1.18
ELL3-203ENST00000467869 NINLQ9Y2I6 1382 aa22.42■■□□□ 1.18
ELL3-203ENST00000467869 DMRT2Q9Y5R5 561 aa22.38■■□□□ 1.17
ELL3-203ENST00000467869 SLC12A5Q9H2X9 1139 aa22.38■■□□□ 1.17
ELL3-203ENST00000467869 PROSER2Q86WR7 435 aaPredicted RBP22.37■■□□□ 1.17
ELL3-203ENST00000467869 NALCNQ8IZF0 1738 aa22.36■■□□□ 1.17
ELL3-203ENST00000467869 C14orf37Q86TY3 774 aa22.35■■□□□ 1.17
ELL3-203ENST00000467869 KNSTRNQ9Y448 316 aa22.35■■□□□ 1.17
ELL3-203ENST00000467869 ADGRL3Q9HAR2 1447 aa22.35■■□□□ 1.17
ELL3-203ENST00000467869 CDC42BPGQ6DT37 1551 aa22.34■■□□□ 1.17
ELL3-203ENST00000467869 NUDT16Q96DE0 195 aaKnown RBP22.34■■□□□ 1.17
ELL3-203ENST00000467869 STRCP1A6NGW2 1772 aa22.34■■□□□ 1.17
ELL3-203ENST00000467869 ATP7BP35670 1465 aa22.33■■□□□ 1.17
ELL3-203ENST00000467869 ANKRD36BQ8N2N9 1353 aa22.33■■□□□ 1.17
ELL3-203ENST00000467869 PER1O15534 1290 aaPredicted RBP22.33■■□□□ 1.16
ELL3-203ENST00000467869 RBM33Q96EV2 1170 aaKnown RBP22.33■■□□□ 1.16
ELL3-203ENST00000467869 PPIP5K1Q6PFW1 1433 aa22.32■■□□□ 1.16
ELL3-203ENST00000467869 TERF2IPQ9NYB0 399 aa22.32■■□□□ 1.16
ELL3-203ENST00000467869 CNGB1Q14028 1251 aaPredicted RBP22.31■■□□□ 1.16
ELL3-203ENST00000467869 CABP1Q9NZU7 370 aa22.31■■□□□ 1.16
ELL3-203ENST00000467869 FMN2Q9NZ56 1722 aa22.3■■□□□ 1.16
ELL3-203ENST00000467869 HDGFL2Q7Z4V5 671 aaPredicted RBP22.3■■□□□ 1.16
ELL3-203ENST00000467869 CCDC61Q9Y6R9 512 aa22.3■■□□□ 1.16
ELL3-203ENST00000467869 KTN1Q86UP2 1357 aaKnown RBP22.3■■□□□ 1.16
ELL3-203ENST00000467869 PRKRIP1Q9H875 184 aaPredicted RBP22.3■■□□□ 1.16
ELL3-203ENST00000467869 NSD3Q9BZ95 1437 aa22.3■■□□□ 1.16
ELL3-203ENST00000467869 TOPAZ1Q8N9V7 1692 aa22.29■■□□□ 1.16
ELL3-203ENST00000467869 PRR36Q9H6K5 1346 aa22.29■■□□□ 1.16
ELL3-203ENST00000467869 NUTM2FA1L443 756 aa22.29■■□□□ 1.16
ELL3-203ENST00000467869 ANKARQ7Z5J8 1434 aa22.29■■□□□ 1.16
ELL3-203ENST00000467869 ITSN1Q15811 1721 aa22.29■■□□□ 1.16
ELL3-203ENST00000467869 PPP4R2Q9NY27 417 aa22.28■■□□□ 1.16
ELL3-203ENST00000467869 A0A1W2PP64 1363 aa22.28■■□□□ 1.16
ELL3-203ENST00000467869 TMEM94Q12767 1356 aa22.28■■□□□ 1.16
ELL3-203ENST00000467869 NCOA3Q9Y6Q9 1424 aa22.28■■□□□ 1.16
ELL3-203ENST00000467869 AEBP2Q6ZN18 517 aaPredicted RBP22.27■■□□□ 1.16
ELL3-203ENST00000467869 ZNF335Q9H4Z2 1342 aaPredicted RBP22.27■■□□□ 1.16
ELL3-203ENST00000467869 USP32Q8NFA0 1604 aa22.27■■□□□ 1.16
ELL3-203ENST00000467869 CARD14Q9BXL6 1004 aa22.27■■□□□ 1.16
ELL3-203ENST00000467869 CD163L1Q9NR16 1453 aa22.26■■□□□ 1.15
ELL3-203ENST00000467869 CC2D1BQ5T0F9 858 aaKnown RBP22.25■■□□□ 1.15
ELL3-203ENST00000467869 RALBP1Q15311 655 aa22.24■■□□□ 1.15
ELL3-203ENST00000467869 NPC1L1Q9UHC9 1359 aa22.23■■□□□ 1.15
ELL3-203ENST00000467869 AMER1Q5JTC6 1135 aaPredicted RBP22.23■■□□□ 1.15
ELL3-203ENST00000467869 C19orf44Q9H6X5 657 aa22.23■■□□□ 1.15
ELL3-203ENST00000467869 CGNL1Q0VF96 1302 aa22.22■■□□□ 1.15
ELL3-203ENST00000467869 LRRC7Q96NW7 1537 aa22.21■■□□□ 1.15
ELL3-203ENST00000467869 PARD3Q8TEW0 1356 aa22.21■■□□□ 1.15
ELL3-203ENST00000467869 DCCP43146 1447 aa22.21■■□□□ 1.15
ELL3-203ENST00000467869 CPSF1Q10570 1443 aaKnown RBP22.21■■□□□ 1.15
ELL3-203ENST00000467869 PLEKHG3A1L390 1219 aa22.2■■□□□ 1.14
ELL3-203ENST00000467869 RGPD8O14715 1765 aaPredicted RBP22.2■■□□□ 1.14
ELL3-203ENST00000467869 MSH6P52701 1360 aa22.2■■□□□ 1.14
ELL3-203ENST00000467869 AKAP12Q02952 1782 aa22.2■■□□□ 1.14
ELL3-203ENST00000467869 ATF3P18847 181 aa22.19■■□□□ 1.14
ELL3-203ENST00000467869 DEKP35659 375 aaKnown RBP22.19■■□□□ 1.14
ELL3-203ENST00000467869 MON2Q7Z3U7 1717 aa22.18■■□□□ 1.14
ELL3-203ENST00000467869 ZNF692Q9BU19 519 aaPredicted RBP22.18■■□□□ 1.14
ELL3-203ENST00000467869 ACEP12821 1306 aa22.17■■□□□ 1.14
ELL3-203ENST00000467869 NSD2O96028 1365 aa22.17■■□□□ 1.14
ELL3-203ENST00000467869 EDC4Q6P2E9 1401 aaKnown RBP22.17■■□□□ 1.14
ELL3-203ENST00000467869 MYBBP1AQ9BQG0 1328 aaKnown RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms