RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 PANK1Q8TE04 598 aa17.12■□□□□ 0.33
BRAT1-203ENST00000467558 ASXL2Q76L83 1435 aa17.12■□□□□ 0.33
BRAT1-203ENST00000467558 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
BRAT1-203ENST00000467558 GAS2L2Q8NHY3 880 aa17.11■□□□□ 0.33
BRAT1-203ENST00000467558 PTMSP20962 102 aa17.11■□□□□ 0.33
BRAT1-203ENST00000467558 TAOK2Q9UL54 1235 aa17.11■□□□□ 0.33
BRAT1-203ENST00000467558 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
BRAT1-203ENST00000467558 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
BRAT1-203ENST00000467558 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
BRAT1-203ENST00000467558 DDX58O95786 925 aaKnown RBP17.1■□□□□ 0.33
BRAT1-203ENST00000467558 FAM135AQ9P2D6 1515 aa17.1■□□□□ 0.33
BRAT1-203ENST00000467558 ABCA5Q8WWZ7 1642 aa17.1■□□□□ 0.33
BRAT1-203ENST00000467558 PDE3AQ14432 1141 aa17.1■□□□□ 0.33
BRAT1-203ENST00000467558 NECTIN2Q92692 538 aa17.09■□□□□ 0.33
BRAT1-203ENST00000467558 DUOX2Q9NRD8 1548 aa17.09■□□□□ 0.33
BRAT1-203ENST00000467558 KDM5BQ9UGL1 1544 aa17.09■□□□□ 0.33
BRAT1-203ENST00000467558 EXOSC9Q06265 439 aaKnown RBP17.09■□□□□ 0.33
BRAT1-203ENST00000467558 SMG6Q86US8 1419 aaKnown RBP17.09■□□□□ 0.33
BRAT1-203ENST00000467558 DISP1Q96F81 1524 aa17.09■□□□□ 0.33
BRAT1-203ENST00000467558 FBXO31Q5XUX0 539 aaPredicted RBP17.08■□□□□ 0.33
BRAT1-203ENST00000467558 NLRP2Q9NX02 1062 aa17.08■□□□□ 0.33
BRAT1-203ENST00000467558 SCAF11Q99590 1463 aaKnown RBP17.08■□□□□ 0.33
BRAT1-203ENST00000467558 SYCP2Q9BX26 1530 aa17.08■□□□□ 0.32
BRAT1-203ENST00000467558 ST18O60284 1047 aa17.07■□□□□ 0.32
BRAT1-203ENST00000467558 L1TD1Q5T7N2 865 aaKnown RBP17.07■□□□□ 0.32
BRAT1-203ENST00000467558 NUDT16Q96DE0 195 aaKnown RBP17.07■□□□□ 0.32
BRAT1-203ENST00000467558 WDR7Q9Y4E6 1490 aa17.07■□□□□ 0.32
BRAT1-203ENST00000467558 C14orf93Q9H972 538 aaKnown RBP17.07■□□□□ 0.32
BRAT1-203ENST00000467558 CT47B1P0C2W7 299 aaPredicted RBP17.07■□□□□ 0.32
BRAT1-203ENST00000467558 SULT6B1Q6IMI4 303 aa17.06■□□□□ 0.32
BRAT1-203ENST00000467558 PLCB2Q00722 1185 aa17.06■□□□□ 0.32
BRAT1-203ENST00000467558 NOS1P29475 1434 aa17.05■□□□□ 0.32
BRAT1-203ENST00000467558 RILPL2Q969X0 211 aa17.05■□□□□ 0.32
BRAT1-203ENST00000467558 FANCIQ9NVI1 1328 aa17.05■□□□□ 0.32
BRAT1-203ENST00000467558 WAPLQ7Z5K2 1190 aa17.05■□□□□ 0.32
BRAT1-203ENST00000467558 FCHSD2O94868 740 aa17.04■□□□□ 0.32
BRAT1-203ENST00000467558 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
BRAT1-203ENST00000467558 DEKP35659 375 aaKnown RBP17.03■□□□□ 0.32
BRAT1-203ENST00000467558 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
BRAT1-203ENST00000467558 GTF2E1P29083 439 aaPredicted RBP17.03■□□□□ 0.32
BRAT1-203ENST00000467558 SHANK2Q9UPX8 1470 aa17.03■□□□□ 0.32
BRAT1-203ENST00000467558 ZNF518AQ6AHZ1 1483 aa17.03■□□□□ 0.32
BRAT1-203ENST00000467558 TSR2Q969E8 191 aaKnown RBP17.03■□□□□ 0.32
BRAT1-203ENST00000467558 A2MP01023 1474 aa17.02■□□□□ 0.32
BRAT1-203ENST00000467558 PLEKHO1Q53GL0 409 aaPredicted RBP17.02■□□□□ 0.32
BRAT1-203ENST00000467558 LNPKQ9C0E8 428 aa17.02■□□□□ 0.31
BRAT1-203ENST00000467558 REC8O95072 547 aa17.01■□□□□ 0.31
BRAT1-203ENST00000467558 BCAR3O75815 825 aa17.01■□□□□ 0.31
BRAT1-203ENST00000467558 PBRM1Q86U86 1689 aa17.01■□□□□ 0.31
BRAT1-203ENST00000467558 CCDC30Q5VVM6 783 aa17.01■□□□□ 0.31
BRAT1-203ENST00000467558 HSP90AB4PQ58FF6 505 aa17■□□□□ 0.31
BRAT1-203ENST00000467558 RALGAPBQ86X10 1494 aa17■□□□□ 0.31
BRAT1-203ENST00000467558 WWC1Q8IX03 1113 aa16.99■□□□□ 0.31
BRAT1-203ENST00000467558 SAMD9Q5K651 1589 aa16.99■□□□□ 0.31
BRAT1-203ENST00000467558 NINLQ9Y2I6 1382 aa16.99■□□□□ 0.31
BRAT1-203ENST00000467558 RRS1Q15050 365 aaKnown RBP16.99■□□□□ 0.31
BRAT1-203ENST00000467558 TARBP1Q13395 1621 aaKnown RBP16.99■□□□□ 0.31
BRAT1-203ENST00000467558 ABCC2Q92887 1545 aa16.99■□□□□ 0.31
BRAT1-203ENST00000467558 SLFN5Q08AF3 891 aa16.99■□□□□ 0.31
BRAT1-203ENST00000467558 GNL2Q13823 731 aaKnown RBP16.99■□□□□ 0.31
BRAT1-203ENST00000467558 HTATSF1O43719 755 aaKnown RBP16.98■□□□□ 0.31
BRAT1-203ENST00000467558 CDK11BP21127 795 aaKnown RBP16.98■□□□□ 0.31
BRAT1-203ENST00000467558 DNTTIP2Q5QJE6 756 aaKnown RBP16.98■□□□□ 0.31
BRAT1-203ENST00000467558 GNAI3P08754 354 aa16.98■□□□□ 0.31
BRAT1-203ENST00000467558 ZNF428Q96B54 188 aa16.98■□□□□ 0.31
BRAT1-203ENST00000467558 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
BRAT1-203ENST00000467558 DIAPH3Q9NSV4 1193 aa16.97■□□□□ 0.31
BRAT1-203ENST00000467558 DISP3Q9P2K9 1392 aa16.97■□□□□ 0.31
BRAT1-203ENST00000467558 TMPOP42166 694 aaKnown RBP16.97■□□□□ 0.31
BRAT1-203ENST00000467558 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
BRAT1-203ENST00000467558 IFIT2P09913 472 aaKnown RBP16.97■□□□□ 0.31
BRAT1-203ENST00000467558 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
BRAT1-203ENST00000467558 ABCC10Q5T3U5 1492 aa16.97■□□□□ 0.31
BRAT1-203ENST00000467558 UBTFL1P0CB47 393 aaPredicted RBP16.96■□□□□ 0.31
BRAT1-203ENST00000467558 G3BP1Q13283 466 aaKnown RBP eCLIP16.96■□□□□ 0.31
BRAT1-203ENST00000467558 GZF1Q9H116 711 aaPredicted RBP16.96■□□□□ 0.31
BRAT1-203ENST00000467558 NOL8Q76FK4 1167 aaKnown RBP16.96■□□□□ 0.31
BRAT1-203ENST00000467558 TMX4Q9H1E5 349 aaPredicted RBP16.96■□□□□ 0.31
BRAT1-203ENST00000467558 FOXD4L1Q9NU39 408 aa16.96■□□□□ 0.31
BRAT1-203ENST00000467558 PRAG1Q86YV5 1406 aa16.96■□□□□ 0.31
BRAT1-203ENST00000467558 SYAP1Q96A49 352 aaPredicted RBP16.96■□□□□ 0.31
BRAT1-203ENST00000467558 ATF7IPQ6VMQ6 1270 aa16.95■□□□□ 0.3
BRAT1-203ENST00000467558 NOB1Q9ULX3 412 aaKnown RBP16.95■□□□□ 0.3
BRAT1-203ENST00000467558 SLC4A3P48751 1232 aa16.95■□□□□ 0.3
BRAT1-203ENST00000467558 NFE2L2Q16236 605 aa16.95■□□□□ 0.3
BRAT1-203ENST00000467558 GOLGA6L6A8MZA4 724 aa16.95■□□□□ 0.3
BRAT1-203ENST00000467558 RIC3Q7Z5B4 369 aa16.95■□□□□ 0.3
BRAT1-203ENST00000467558 SYTL4Q96C24 671 aaPredicted RBP16.95■□□□□ 0.3
BRAT1-203ENST00000467558 TEX14Q8IWB6 1497 aa16.94■□□□□ 0.3
BRAT1-203ENST00000467558 NRDCO43847 1150 aa16.94■□□□□ 0.3
BRAT1-203ENST00000467558 HSP90B1P14625 803 aaKnown RBP16.94■□□□□ 0.3
BRAT1-203ENST00000467558 LRRFIP1Q32MZ4 808 aaKnown RBP16.94■□□□□ 0.3
BRAT1-203ENST00000467558 AMOTL2Q9Y2J4 779 aa16.94■□□□□ 0.3
BRAT1-203ENST00000467558 DNMT1P26358 1616 aaKnown RBP16.94■□□□□ 0.3
BRAT1-203ENST00000467558 CEBPAP49715 358 aaPredicted RBP16.93■□□□□ 0.3
BRAT1-203ENST00000467558 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
BRAT1-203ENST00000467558 NSD2O96028 1365 aa16.93■□□□□ 0.3
BRAT1-203ENST00000467558 INTS3Q68E01 1043 aaKnown RBP16.93■□□□□ 0.3
BRAT1-203ENST00000467558 FRAT2O75474 233 aaPredicted RBP16.93■□□□□ 0.3
BRAT1-203ENST00000467558 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms